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BLAST
Target RNA
About
Species
Box type
Target RNA
Organization
all
Aegilops_tauschii
Arabidopsis_thaliana
Caenorhabditis_elegans
Canis_familiaris
Cavia_porcellus
Ciona_intestinalis
Ciona_savignyi
Danio_rerio
Dasypus_novemcinctus
Drosophila_melanogaster
Echinops_telfairi
Equus_caballus
Erinaceus_europaeus
Felis_catus
Gallus_gallus
Gasterosteus_aculeatus
Gorilla_gorilla
Homo_sapiens
Hordeum_vulgare
Loxodonta_africana
Macaca_mulatta
Microcebus_murinus
Monodelphis_domestica
Mus_musculus
Myotis_lucifugus
Ornithorhynchus_anatinus
Oryctolagus_cuniculus
Oryza_sativa
Oryzias_latipes
Otolemur_garnettii
Pan_troglodytes
Physcomitrium_patens
Pongo_pygmaeus
Rattus_norvegicus
Saccharomyces_cerevisiae
Schizosaccharomyces_pombe
Sorex_araneus
Spermophilus_tridecemlineatus
Tetraodon_nigroviridis
Triticum_aestivum
Triticum_dicoccoides
Tupaia_belangeri
Xenopus_tropicalis
all
C/D
H/ACA
unknown
all
18S rRNA
28S rRNA
5.8S rRNA
U3 snoRNA
U4 snRNA
18S rRNA
18S rRNA
18SrRNA
25S rRNA
25S rRNA
25SrRNA
26S rRNA
28S rRN
28S rRNA
5'External Transcribed Spacer (ETS)
5.8S rRNA
?28S rRNA
Nonfunctional
U1 snRNA
U12 snRNA
U2 snRNA
U3
U3 snoRNA
U4 snRNA
U5 snRNA
U6 snRNA
Unknown
5.8S rRNA
all
Intronic
Mono
Poly
Keywords
Curation status
Locus View
all
curated
Species
snoRNA name
Box
Target RNA
Organization
Locus
Saccharomyces_cerevisiae
MRP (NME1,RRP2)
unknown
Unknown
Mono
Mono:50:MRP
Saccharomyces_cerevisiae
snR10
H/ACA
25S rRNA
Mono
Mono:15:snR10
Saccharomyces_cerevisiae
snR11
H/ACA
25S rRNA
Mono
Mono:33:snR11
Saccharomyces_cerevisiae
snR13
C/D
25S rRNA
Mono
Mono:8:snR13
Saccharomyces_cerevisiae
snR161 (RNA161)
H/ACA
18S rRNA
Mono
Mono:1:snR161
Saccharomyces_cerevisiae
snR189
H/ACA
18S rRNA,25S rRNA
Mono
Mono:5:snR189
Saccharomyces_cerevisiae
snR190
C/D
25S rRNA
Poly
Poly:1:snR128
Saccharomyces_cerevisiae
snR191
H/ACA
25S rRNA
Intronic
NOG2
Saccharomyces_cerevisiae
snR3
H/ACA
25S rRNA
Mono
Mono:23:snR3
Saccharomyces_cerevisiae
snR30 (U17)
H/ACA
Unknown
Mono
Mono:28:snR30
Saccharomyces_cerevisiae
snR31
H/ACA
18S rRNA
Mono
Mono:43:snR31
Saccharomyces_cerevisiae
snR32
H/ACA
25S rRNA
Mono
Mono:19:snR32
Saccharomyces_cerevisiae
snR33
H/ACA
25S rRNA
Mono
Mono:3:snR33
Saccharomyces_cerevisiae
snR34
H/ACA
25S rRNA
Mono
Mono:30:snR34
Saccharomyces_cerevisiae
snR35
H/ACA
18S rRNA
Mono
Mono:41:snR35
Saccharomyces_cerevisiae
snR36
H/ACA
18S rRNA
Mono
Mono:40:snR36
Saccharomyces_cerevisiae
snR37
H/ACA
25S rRNA
Mono
Mono:21:snR37
Saccharomyces_cerevisiae
snR38
C/D
25S rRNA
Intronic
TEF4
Saccharomyces_cerevisiae
snR39
C/D
25S rRNA
Intronic
RPL7A
Saccharomyces_cerevisiae
snR39b
C/D
25S rRNA
Mono
Mono:16:snR39B
Saccharomyces_cerevisiae
snR4
C/D
Unknown
Mono
Mono:12:snR4
Saccharomyces_cerevisiae
snR40
C/D
18S rRNA,25S rRNA
Mono
Mono:35:snR40
Saccharomyces_cerevisiae
snR41
C/D
18S rRNA
Poly
Poly:6:snR51
Saccharomyces_cerevisiae
snR42
H/ACA
25S rRNA
Mono
Mono:27:snR42
Saccharomyces_cerevisiae
snR43
H/ACA
5.8S rRNA,25S rRNA
Mono
Mono:2:snR43
Saccharomyces_cerevisiae
snR44
H/ACA
18S rRNA,25S rRNA
Intronic
RPS22B
Saccharomyces_cerevisiae
snR45
C/D
Unknown
Mono
Saccharomyces_cerevisiae
snR46
H/ACA
25S rRNA
Mono
Mono:17:snR46
Saccharomyces_cerevisiae
snR47
C/D
18S rRNA,25S rRNA
Mono
Mono:7:snR47
Saccharomyces_cerevisiae
snR48
C/D
25S rRNA
Mono
Mono:18:snR48
Saccharomyces_cerevisiae
snR49
H/ACA
25S rRNA,18S rRNA
Mono
Mono:36:snR49
Saccharomyces_cerevisiae
snR5
H/ACA
25S rRNA
Mono
Mono:44:snR5
Saccharomyces_cerevisiae
snR50 (Z14)
C/D
25S rRNA
Mono
Mono:39:snR50
Saccharomyces_cerevisiae
snR51
C/D
18S rRNA,25S rRNA
Poly
Poly:6:snR51
Saccharomyces_cerevisiae
snR52 (Z13)
C/D
18S rRNA,25S rRNA
Mono
Mono:13:snR52
Saccharomyces_cerevisiae
snR53
C/D
18S rRNA
Poly
Poly:0:snR67
Saccharomyces_cerevisiae
snR54
C/D
18S rRNA
Intronic
IMD4
Saccharomyces_cerevisiae
snR55 (Z10)
C/D
18S rRNA
Poly
Poly:2:snR61
Saccharomyces_cerevisiae
snR56
C/D
18S rRNA
Mono
Mono:0:snR56
Saccharomyces_cerevisiae
snR57
C/D
18S rRNA
Poly
Poly:2:snR61
Saccharomyces_cerevisiae
snR58 (Z12)
C/D
25S rRNA
Mono
Mono:37:snR58
Saccharomyces_cerevisiae
snR59
C/D
25S rRNA
Intronic
RPL7B
Saccharomyces_cerevisiae
snR60 (Z15)
C/D
25S rRNA
Mono
Mono:22:snR60
Saccharomyces_cerevisiae
snR61 (Z11)
C/D
25S rRNA
Poly
Poly:2:snR61
Saccharomyces_cerevisiae
snR62
C/D
25S rRNA
Mono
Mono:46:snR62
Saccharomyces_cerevisiae
snR63
C/D
25S rRNA
Mono
Mono:6:snR63
Saccharomyces_cerevisiae
snR64
C/D
25S rRNA
Mono
Mono:24:snR64
Saccharomyces_cerevisiae
snR65
C/D
25S rRNA
Mono
Mono:4:snR65
Saccharomyces_cerevisiae
snR66 (Z16)
C/D
25S rRNA
Mono
Mono:50:snR66
Saccharomyces_cerevisiae
snR67
C/D
25S rRNA
Poly
Poly:0:snR67
Saccharomyces_cerevisiae
snR68
C/D
25S rRNA
Mono
Mono:10:snR68
Saccharomyces_cerevisiae
snR69
C/D
25S rRNA
Mono
Mono:25:snR69
Saccharomyces_cerevisiae
snR70
C/D
18S rRNA
Poly
Poly:6:snR51
Saccharomyces_cerevisiae
snR71
C/D
25S rRNA
Mono
Mono:20:snR71
Saccharomyces_cerevisiae
snR72 (Z2)
C/D
25S rRNA
Poly
Poly:3:snR78
Saccharomyces_cerevisiae
snR73 (Z3)
C/D
25S rRNA
Poly
Poly:3:snR78
Saccharomyces_cerevisiae
snR74 (Z4)
C/D
18S rRNA
Poly
Poly:3:snR78
Saccharomyces_cerevisiae
snR75 (Z5)
C/D
25S rRNA
Poly
Poly:3:snR78
Saccharomyces_cerevisiae
snR76 (Z6)
C/D
25S rRNA
Poly
Poly:3:snR78
Saccharomyces_cerevisiae
snR77 (Z7)
C/D
18S rRNA
Poly
Poly:3:snR78
Saccharomyces_cerevisiae
snR78 (Z8)
C/D
25S rRNA
Poly
Poly:3:snR78
Saccharomyces_cerevisiae
snR79 (Z9)
C/D
18S rRNA
Mono
Mono:29:snR79
Saccharomyces_cerevisiae
snR8
H/ACA
25S rRNA
Mono
Mono:42:snR8
Saccharomyces_cerevisiae
snR80
H/ACA
18S rRNA,25S rRNA
Mono
Mono:11:snR80
Saccharomyces_cerevisiae
snR81
H/ACA
U2 snRNA,25S rRNA
Mono
Mono:38:snR81
Saccharomyces_cerevisiae
snR82 (RUF2)
H/ACA
25S rRNA
Mono
Mono:14:snR82
Saccharomyces_cerevisiae
snR83 (RUF3)
H/ACA
18S rRNA
Mono
Mono:32:snR83
Saccharomyces_cerevisiae
snR84 (RUF1)
H/ACA
25S rRNA
Mono
Mono:9:snR84
Saccharomyces_cerevisiae
snR85
H/ACA
18S rRNA
Mono
Mono:31:snR85
Saccharomyces_cerevisiae
snR86
H/ACA
25S rRNA
Mono
Mono:34:snR86
Saccharomyces_cerevisiae
snR87
C/D
18S rRNA
Mono
Mono:26:snR87
Saccharomyces_cerevisiae
snR9
H/ACA
25S rRNA
Mono
Mono:47:snR9
Saccharomyces_cerevisiae
U14 (snR128)
C/D
18S rRNA
Poly
Poly:1:snR128
Saccharomyces_cerevisiae
U18 (snR18)
C/D
25S rRNA
Intronic
EFB1
Saccharomyces_cerevisiae
U24 (snR24)
C/D
25S rRNA
Intronic
ASC1
Saccharomyces_cerevisiae
U3a (snR17a)
C/D
18S rRNA,5'External Transcribed Spacer (ETS)
Mono
Mono:48:U3a
Saccharomyces_cerevisiae
U3b (snR17b)
C/D
18S rRNA,5'External Transcribed Spacer (ETS)
Mono
Mono:45:snR17b
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