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BLAST
Target RNA
About
Species
Box type
Target RNA
Organization
all
Aegilops_tauschii
Arabidopsis_thaliana
Caenorhabditis_elegans
Canis_familiaris
Cavia_porcellus
Ciona_intestinalis
Ciona_savignyi
Danio_rerio
Dasypus_novemcinctus
Drosophila_melanogaster
Echinops_telfairi
Equus_caballus
Erinaceus_europaeus
Felis_catus
Gallus_gallus
Gasterosteus_aculeatus
Gorilla_gorilla
Homo_sapiens
Hordeum_vulgare
Loxodonta_africana
Macaca_mulatta
Microcebus_murinus
Monodelphis_domestica
Mus_musculus
Myotis_lucifugus
Ornithorhynchus_anatinus
Oryctolagus_cuniculus
Oryza_sativa
Oryzias_latipes
Otolemur_garnettii
Pan_troglodytes
Physcomitrium_patens
Pongo_pygmaeus
Rattus_norvegicus
Saccharomyces_cerevisiae
Schizosaccharomyces_pombe
Sorex_araneus
Spermophilus_tridecemlineatus
Tetraodon_nigroviridis
Triticum_aestivum
Triticum_dicoccoides
Tupaia_belangeri
Xenopus_tropicalis
all
C/D
H/ACA
unknown
all
18S rRNA
28S rRNA
5.8S rRNA
U3 snoRNA
U4 snRNA
18S rRNA
18S rRNA
18SrRNA
25S rRNA
25S rRNA
25SrRNA
26S rRNA
28S rRN
28S rRNA
5'External Transcribed Spacer (ETS)
5.8S rRNA
?28S rRNA
Nonfunctional
U1 snRNA
U12 snRNA
U2 snRNA
U3
U3 snoRNA
U4 snRNA
U5 snRNA
U6 snRNA
Unknown
5.8S rRNA
all
Intronic
Mono
Poly
Keywords
Curation status
Locus View
all
curated
Species
snoRNA name
Box
Target RNA
Organization
Locus
Oryza_sativa
R38
C/D
poly
Poly:28:LOC112939453
Oryza_sativa
snoJ33
C/D
mono
LOC4325900
Oryza_sativa
snoR1
C/D
poly
Poly:1:LOC112938028
Oryza_sativa
snoR1
C/D
poly
Poly:1:LOC112938028
Oryza_sativa
snoR1
C/D
poly
Poly:1:LOC112938028
Oryza_sativa
snoR11
C/D
poly
Poly:2:LOC112938033
Oryza_sativa
snoR11
C/D
poly
Poly:2:LOC112938033
Oryza_sativa
snoR117
C/D
poly
Poly:12:LOC112936235
Oryza_sativa
snoR134
C/D
poly
Poly:7:LOC112939742
Oryza_sativa
snoR41
C/D
Intronic
LOC9268552
Oryza_sativa
snoR44_J54
C/D
Intronic
LOC9272689
Oryza_sativa
snoR44_J54
C/D
Intronic
LOC9272689
Oryza_sativa
snoR44_J54
C/D
poly
Poly:13:LOC112936286
Oryza_sativa
snoR44_J54
C/D
poly
Poly:13:LOC112936286
Oryza_sativa
snoR44_J54
C/D
poly
Poly:17:LOC112936508
Oryza_sativa
snoR60
C/D
Intronic
LOC4331181
Oryza_sativa
snoR60
C/D
Intronic
LOC9266224
Oryza_sativa
SNOR75
C/D
Intronic
LOC4326469
Oryza_sativa
SNOR75
C/D
poly
Poly:30:LOC112938455
Oryza_sativa
SNOR75
C/D
poly
Poly:30:LOC112938455
Oryza_sativa
snoR77Y
C/D
Intronic
LOC112936030
Oryza_sativa
snoR77Y
C/D
poly
Poly:29:LOC112938433
Oryza_sativa
snoR77Y
C/D
poly
Poly:29:LOC112938433
Oryza_sativa
snoR77Y
C/D
poly
Poly:29:LOC112938433
Oryza_sativa
snoR77Y
C/D
poly
Poly:29:LOC112938433
Oryza_sativa
snoR77Y
C/D
poly
Poly:29:LOC112938433
Oryza_sativa
SNORD14
C/D
Intronic
LOC112936030
Oryza_sativa
SNORD14
C/D
Intronic
LOC112936030
Oryza_sativa
SNORD14
C/D
poly
Poly:29:LOC112938433
Oryza_sativa
SNORD14
C/D
poly
Poly:29:LOC112938433
Oryza_sativa
SNORD14
C/D
poly
Poly:29:LOC112938433
Oryza_sativa
SNORD18
C/D
poly
Poly:30:LOC112938455
Oryza_sativa
SNORD24
C/D
Intronic
LOC4334154
Oryza_sativa
SNORD24
C/D
Intronic
LOC4334154
Oryza_sativa
SNORD24
C/D
poly
Poly:29:LOC112938433
Oryza_sativa
SNORD24
C/D
poly
Poly:6:LOC112939755
Oryza_sativa
SNORD25
C/D
Intronic
LOC4336352
Oryza_sativa
SNORD25
C/D
Intronic
LOC4336352
Oryza_sativa
SNORD25
C/D
Intronic
LOC4336352
Oryza_sativa
SNORD25
C/D
poly
Poly:0:LOC112938056
Oryza_sativa
SNORD36
C/D
Intronic
LOC4340027
Oryza_sativa
SNORD36
C/D
Intronic
LOC4340027
Oryza_sativa
snosnR60_Z15
C/D
Intronic
LOC4344696
Oryza_sativa
snosnR60_Z15
C/D
poly
Poly:23:LOC112939167
Oryza_sativa
snoU31b
C/D
poly
Poly:12:LOC112936235
Oryza_sativa
snoU31b
C/D
poly
Poly:31:LOC112938431
Oryza_sativa
snoU31b
C/D
poly
Poly:31:LOC112938431
Oryza_sativa
snoZ102_R77
C/D
poly
Poly:22:LOC112937709
Oryza_sativa
snoZ102_R77
C/D
poly
Poly:27:LOC112939449
Oryza_sativa
snoZ103
C/D
Intronic
LOC4324441
Oryza_sativa
snoZ103
C/D
Intronic
LOC4324441
Oryza_sativa
snoZ103
C/D
poly
Poly:22:LOC112937709
Oryza_sativa
snoZ103
C/D
poly
Poly:33:LOC112938490
Oryza_sativa
snoZ118
C/D
Intronic
LOC4328063
Oryza_sativa
snoZ118
C/D
Intronic
LOC4328063
Oryza_sativa
snoZ118
C/D
Intronic
LOC4328063
Oryza_sativa
snoZ118
C/D
Intronic
LOC4328063
Oryza_sativa
snoZ118
C/D
Intronic
LOC4328063
Oryza_sativa
snoZ118
C/D
Intronic
LOC4328063
Oryza_sativa
snoZ118
C/D
Intronic
LOC4328063
Oryza_sativa
snoZ119
C/D
poly
Poly:21:LOC112937710
Oryza_sativa
snoZ119
C/D
poly
Poly:21:LOC112937710
Oryza_sativa
snoZ122
C/D
Intronic
LOC4326841
Oryza_sativa
snoZ152
C/D
poly
Poly:2:LOC112938033
Oryza_sativa
snoZ155
C/D
poly
Poly:24:LOC112939166
Oryza_sativa
snoZ159
C/D
mono
Mono:3:LOC112939145
Oryza_sativa
snoZ159
C/D
poly
Poly:3:LOC112937518
Oryza_sativa
snoZ159
C/D
poly
Poly:3:LOC112937518
Oryza_sativa
snoZ159
C/D
poly
Poly:34:LOC112938427
Oryza_sativa
snoZ163
C/D
poly
Poly:11:LOC112936741
Oryza_sativa
snoZ163
C/D
poly
Poly:8:LOC112936742
Oryza_sativa
snoZ165
C/D
poly
Poly:11:LOC112936741
Oryza_sativa
snoZ165
C/D
poly
Poly:8:LOC112936742
Oryza_sativa
snoZ168
C/D
poly
Poly:8:LOC112936742
Oryza_sativa
snoZ169
C/D
poly
Poly:8:LOC112936742
Oryza_sativa
snoZ169
C/D
poly
Poly:8:LOC112936742
Oryza_sativa
snoZ173
C/D
poly
Poly:8:LOC112936742
Oryza_sativa
snoZ182
C/D
poly
Poly:9:LOC112936746
Oryza_sativa
snoZ182
C/D
poly
Poly:9:LOC112936746
Oryza_sativa
snoZ185
C/D
poly
Poly:9:LOC112936746
Oryza_sativa
snoZ188
C/D
poly
Poly:10:LOC112936734
Oryza_sativa
snoZ188
C/D
poly
Poly:10:LOC112936734
Oryza_sativa
snoZ194
C/D
poly
Poly:4:LOC112937531
Oryza_sativa
snoZ194
C/D
poly
Poly:4:LOC112937531
Oryza_sativa
snoZ199
C/D
Intronic
LOC4328048
Oryza_sativa
snoZ199
C/D
Intronic
LOC4344579
Oryza_sativa
snoZ199
C/D
Intronic
LOC4344579
Oryza_sativa
snoZ199
C/D
poly
Poly:20:LOC112938879
Oryza_sativa
snoZ221_snoR21b
C/D
mono
Mono:0:LOC112938013
Oryza_sativa
snoZ221_snoR21b
C/D
mono
Mono:15:LOC112937691
Oryza_sativa
snoZ223
C/D
Intronic
LOC107279053
Oryza_sativa
snoZ223
C/D
poly
Poly:26:LOC112939486
Oryza_sativa
snoZ223
C/D
poly
Poly:26:LOC112939486
Oryza_sativa
snoZ223
C/D
poly
Poly:32:LOC112938448
Oryza_sativa
snoZ223
C/D
poly
Poly:7:LOC112939742
Oryza_sativa
snoZ223
C/D
poly
Poly:7:LOC112939742
Oryza_sativa
snoZ266
C/D
Intronic
LOC4332169
Oryza_sativa
snoZ266
C/D
Intronic
LOC4332169
Oryza_sativa
snoZ266
C/D
Intronic
LOC4347896
Oryza_sativa
snoZ266
C/D
Intronic
LOC4347896
Oryza_sativa
snoZ278
C/D
poly
Poly:26:LOC112939486
Oryza_sativa
snoZ278
C/D
poly
Poly:26:LOC112939486
Oryza_sativa
snoZ278
C/D
poly
Poly:7:LOC112939742
Oryza_sativa
snoZ279_R105_R108
C/D
mono
Mono:22:LOC112937240
Oryza_sativa
U54
C/D
Intronic
LOC4338229
Oryza_sativa
Z119
C/D
Intronic
LOC4326841
Oryza_sativa
Z119
C/D
Intronic
LOC4326841
Oryza_sativa
Z157_R69_R10
C/D
poly
Poly:28:LOC112939453
Oryza_sativa
Z157_R69_R10
C/D
poly
Poly:28:LOC112939453
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