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BLAST
Target RNA
About
Species
Box type
Target RNA
Organization
all
Aegilops_tauschii
Arabidopsis_thaliana
Caenorhabditis_elegans
Canis_familiaris
Cavia_porcellus
Ciona_intestinalis
Ciona_savignyi
Danio_rerio
Dasypus_novemcinctus
Drosophila_melanogaster
Echinops_telfairi
Equus_caballus
Erinaceus_europaeus
Felis_catus
Gallus_gallus
Gasterosteus_aculeatus
Gorilla_gorilla
Homo_sapiens
Hordeum_vulgare
Loxodonta_africana
Macaca_mulatta
Microcebus_murinus
Monodelphis_domestica
Mus_musculus
Myotis_lucifugus
Ornithorhynchus_anatinus
Oryctolagus_cuniculus
Oryza_sativa
Oryzias_latipes
Otolemur_garnettii
Pan_troglodytes
Physcomitrium_patens
Pongo_pygmaeus
Rattus_norvegicus
Saccharomyces_cerevisiae
Schizosaccharomyces_pombe
Sorex_araneus
Spermophilus_tridecemlineatus
Tetraodon_nigroviridis
Triticum_aestivum
Triticum_dicoccoides
Tupaia_belangeri
Xenopus_tropicalis
all
C/D
H/ACA
unknown
all
18S rRNA
28S rRNA
5.8S rRNA
U3 snoRNA
U4 snRNA
18S rRNA
18S rRNA
18SrRNA
25S rRNA
25S rRNA
25SrRNA
26S rRNA
28S rRN
28S rRNA
5'External Transcribed Spacer (ETS)
5.8S rRNA
?28S rRNA
Nonfunctional
U1 snRNA
U12 snRNA
U2 snRNA
U3
U3 snoRNA
U4 snRNA
U5 snRNA
U6 snRNA
Unknown
5.8S rRNA
all
Intronic
Mono
Poly
Keywords
Curation status
Locus View
all
curated
Species
snoRNA name
Box
Target RNA
Organization
Locus
Danio_rerio
ACA64
H/ACA
28S rRNA
Intronic
nifk
Danio_rerio
ACA64
H/ACA
28S rRNA
Intronic
nifk
Danio_rerio
SNORA1
H/ACA
28S rRNA
Intronic
si:ch211-209a2.1
Danio_rerio
SNORA13
H/ACA
18S rRNA
Intronic
ldb1a
Danio_rerio
SNORA13
H/ACA
18S rRNA
Intronic
LOC101886800
Danio_rerio
SNORA13
H/ACA
18S rRNA
Intronic
LOC101886800
Danio_rerio
SNORA13
H/ACA
18S rRNA
Intronic
znf687b
Danio_rerio
SNORA14
H/ACA
18S rRNA
Intronic
arid4b
Danio_rerio
SNORA14
H/ACA
18S rRNA
Intronic
arid4b
Danio_rerio
SNORA16
H/ACA
28S rRNA
Intronic
LOC100535315
Danio_rerio
SNORA16
H/ACA
28S rRNA
Intronic
LOC100535315
Danio_rerio
SNORA17
H/ACA
28S rRNA
Intronic
LOC101886388
Danio_rerio
SNORA18
H/ACA
Unknown
Intronic
si:ch211-209a2.1
Danio_rerio
SNORA19
H/ACA
28S rRNA
Intronic
rps13
Danio_rerio
SNORA2
H/ACA
28S rRNA
Intronic
zgc:103534
Danio_rerio
SNORA21
H/ACA
28S rRNA
Intronic
Rpl23
Danio_rerio
SNORA21
H/ACA
28S rRNA
Intronic
Rpl23
Danio_rerio
SNORA23
H/ACA
28S rRNA
Intronic
zgc:76878
Danio_rerio
SNORA23
H/ACA
28S rRNA
Intronic
zgc:76878
Danio_rerio
SNORA24
H/ACA
18S rRNA
Intronic
usp10
Danio_rerio
SNORA26
H/ACA
28S rRNA
Intronic
LOC100536039
Danio_rerio
SNORA26
H/ACA
28S rRNA
Intronic
LOC100536039
Danio_rerio
SNORA29
H/ACA
Unknown
Intronic
nop2
Danio_rerio
SNORA29
H/ACA
Unknown
Intronic
nop2
Danio_rerio
SNORA3
H/ACA
28S rRNA
Intronic
si:ch73-295i22.2
Danio_rerio
SNORA3
H/ACA
28S rRNA
Intronic
si:ch73-295i22.2
Danio_rerio
SNORA3
H/ACA
28S rRNA
Intronic
si:ch73-295i22.2
Danio_rerio
SNORA3
H/ACA
28S rRNA
Intronic
si:ch73-295i22.2
Danio_rerio
SNORA30
H/ACA
28S rRNA
Intronic
Poly:9:SNORA30
Danio_rerio
SNORA30
H/ACA
28S rRNA
Intronic
Poly:9:SNORA30
Danio_rerio
SNORA30
H/ACA
28S rRNA
Intronic
Poly:9:SNORA30
Danio_rerio
SNORA31
H/ACA
18S rRNA,28S rRNA
Intronic
wu:fa28a02
Danio_rerio
SNORA31
H/ACA
18S rRNA,28S rRNA
Intronic
wu:fa28a02
Danio_rerio
SNORA32
H/ACA
28S rRNA
Intronic
si:ch211-209a2.1
Danio_rerio
SNORA35
H/ACA
Unknown
Intronic
rpl4
Danio_rerio
SNORA36
H/ACA
18S rRNA
Intronic
zgc:110395
Danio_rerio
SNORA38
H/ACA
Unknown
Intronic
crebbpa
Danio_rerio
SNORA42
H/ACA
18S rRNA
Intronic
nol5a
Danio_rerio
SNORA47
H/ACA
28S rRNA
Intronic
rps8
Danio_rerio
SNORA5
H/ACA
18S rRNA
Intronic
pum1
Danio_rerio
SNORA5
H/ACA
18S rRNA
Intronic
pabpc1b
Danio_rerio
SNORA5
H/ACA
18S rRNA
Intronic
pum1
Danio_rerio
SNORA5
H/ACA
18S rRNA
Intronic
pabpc1b
Danio_rerio
SNORA50
H/ACA
18S rRNA
Mono
Mono:35:SNORA50
Danio_rerio
SNORA53
H/ACA
Unknown
Intronic
slc25a3b
Danio_rerio
SNORA53
H/ACA
Unknown
Intronic
slc25a3b
Danio_rerio
SNORA54
H/ACA
28S rRNA
Intronic
rpl3
Danio_rerio
SNORA55
H/ACA
18S rRNA
Intronic
rsl1d1
Danio_rerio
SNORA55
H/ACA
18S rRNA
Intronic
rsl1d1
Danio_rerio
SNORA56
H/ACA
28S rRNA
Intronic
zgc:110395
Danio_rerio
SNORA57
H/ACA
18S rRNA
Intronic
si:ch73-39o22.3
Danio_rerio
SNORA57
H/ACA
18S rRNA
Intronic
A4IGG2_DANRE
Danio_rerio
SNORA57
H/ACA
18S rRNA
Intronic
A4IGG2_DANRE
Danio_rerio
SNORA62
H/ACA
28S rRNA
Intronic
rpsa
Danio_rerio
SNORA62
H/ACA
28S rRNA
Intronic
rpsa
Danio_rerio
SNORA62
H/ACA
28S rRNA
Intronic
rpsa
Danio_rerio
SNORA62
H/ACA
28S rRNA
Mono
Mono:5:SNORA62
Danio_rerio
SNORA63
H/ACA
28S rRNA
Intronic
rplp0
Danio_rerio
SNORA63
H/ACA
28S rRNA
Intronic
rplp0
Danio_rerio
SNORA63
H/ACA
28S rRNA
Intronic
rplp0
Danio_rerio
SNORA63
H/ACA
28S rRNA
Intronic
rplp0
Danio_rerio
SNORA63
H/ACA
28S rRNA
Intronic
rplp0
Danio_rerio
SNORA65
H/ACA
28S rRNA
Intronic
Rpl12
Danio_rerio
SNORA65
H/ACA
28S rRNA
Intronic
Rpl12
Danio_rerio
SNORA65
H/ACA
28S rRNA
Intronic
Rpl12
Danio_rerio
SNORA68
H/ACA
28S rRNA
Intronic
rpl18a
Danio_rerio
SNORA68
H/ACA
28S rRNA
Intronic
rpl18a
Danio_rerio
SNORA69
H/ACA
18S rRNA, 5.8S rRNA
Intronic
zgc:92371
Danio_rerio
SNORA7
H/ACA
28S rRNA
Intronic
rpl32
Danio_rerio
SNORA70
H/ACA
18S rRNA
Intronic
RPL10
Danio_rerio
SNORA70
H/ACA
18S rRNA
Intronic
RPL10
Danio_rerio
SNORA71
H/ACA
18S rRNA
Intronic
zgc:114188
Danio_rerio
SNORA71
H/ACA
18S rRNA
Intronic
zgc:114188
Danio_rerio
SNORA73
H/ACA
Unknown
Intronic
rps7
Danio_rerio
SNORA73
H/ACA
Unknown
Intronic
rps7
Danio_rerio
SNORA73
H/ACA
Unknown
Intronic
rps7
Danio_rerio
SNORA73
H/ACA
Unknown
Intronic
rps7
Danio_rerio
SNORA74
H/ACA
28S rRNA, U3 snoRNA
Intronic
si:dkey-102m7.3
Danio_rerio
SNORA74
H/ACA
28S rRNA,U3
Intronic
carm1
Danio_rerio
SNORA75
H/ACA
18S rRNA
Intronic
zgc:152810
Danio_rerio
SNORA75
H/ACA
18S rRNA
Intronic
zgc:152810
Danio_rerio
SNORA77
H/ACA
18S rRNA
Intronic
ranbp1
Danio_rerio
SNORA79
H/ACA
U6 snRNA
Intronic
kpnb1
Danio_rerio
SNORA81
H/ACA
Unknown
Intronic
eif4a2
Danio_rerio
SNORA81
H/ACA
Unknown
Intronic
eif4a2
Danio_rerio
SNORA84
H/ACA
Unknown
Intronic
kpnb3
Danio_rerio
SNORA9
H/ACA
28S rRNA
Intronic
si:dkey-154b15.1
Danio_rerio
SNORA9
H/ACA
28S rRNA
Intronic
si:dkey-154b15.1
Danio_rerio
snoU109
H/ACA
Unknown
Intronic
si:dkey-102m7.3
Danio_rerio
snoU109
H/ACA
Unknown
Intronic
si:dkey-102m7.3
Danio_rerio
snR50
H/ACA
Unknown
Mono
Mono:34:snR50
Copyright © 2008 Medical Biology, Faculty of Medicine, University of Miyazaki, All rights reserved