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BLAST
Target RNA
About
Species
Box type
Target RNA
Organization
all
Aegilops_tauschii
Arabidopsis_thaliana
Caenorhabditis_elegans
Canis_familiaris
Cavia_porcellus
Ciona_intestinalis
Ciona_savignyi
Danio_rerio
Dasypus_novemcinctus
Drosophila_melanogaster
Echinops_telfairi
Equus_caballus
Erinaceus_europaeus
Felis_catus
Gallus_gallus
Gasterosteus_aculeatus
Gorilla_gorilla
Homo_sapiens
Hordeum_vulgare
Loxodonta_africana
Macaca_mulatta
Microcebus_murinus
Monodelphis_domestica
Mus_musculus
Myotis_lucifugus
Ornithorhynchus_anatinus
Oryctolagus_cuniculus
Oryza_sativa
Oryzias_latipes
Otolemur_garnettii
Pan_troglodytes
Physcomitrium_patens
Pongo_pygmaeus
Rattus_norvegicus
Saccharomyces_cerevisiae
Schizosaccharomyces_pombe
Sorex_araneus
Spermophilus_tridecemlineatus
Tetraodon_nigroviridis
Triticum_aestivum
Triticum_dicoccoides
Tupaia_belangeri
Xenopus_tropicalis
all
C/D
H/ACA
unknown
all
18S rRNA
28S rRNA
5.8S rRNA
U3 snoRNA
U4 snRNA
18S rRNA
18S rRNA
18SrRNA
25S rRNA
25S rRNA
25SrRNA
26S rRNA
28S rRN
28S rRNA
5'External Transcribed Spacer (ETS)
5.8S rRNA
?28S rRNA
Nonfunctional
U1 snRNA
U12 snRNA
U2 snRNA
U3
U3 snoRNA
U4 snRNA
U5 snRNA
U6 snRNA
Unknown
5.8S rRNA
all
Intronic
Mono
Poly
Keywords
Curation status
Locus View
all
curated
Species
snoRNA name
Box
Target RNA
Organization
Locus
Danio_rerio
ACEA_U3
C/D
18S rRNA
Poly
Poly:1:U3
Danio_rerio
snoMBII-202
C/D
18S rRNA, 28S rRNA
Intronic
Rpl13
Danio_rerio
snoMBII-202
C/D
18S rRNA, 28S rRNA
Intronic
Rpl13
Danio_rerio
snoMBII-202
C/D
18S rRNA, 28S rRNA
Intronic
Rpl13
Danio_rerio
snoR38
C/D
28S rRNA
Intronic
LOC100535890
Danio_rerio
SNORD10
C/D
U6 snRNA, 28S rRNA
Intronic
eif4a1a
Danio_rerio
SNORD100
C/D
18S rRNA
Intronic
rps12
Danio_rerio
SNORD101
C/D
Unknown
Intronic
rps12
Danio_rerio
SNORD111
C/D
28S rRNA
Intronic
sf3b3
Danio_rerio
SNORD111
C/D
28S rRNA
Intronic
sf3b3
Danio_rerio
SNORD111
C/D
28S rRNA
Intronic
sf3b3
Danio_rerio
SNORD111
C/D
28S rRNA
Intronic
sf3b3
Danio_rerio
SNORD11B
C/D
18S rRNA
Intronic
nop58
Danio_rerio
SNORD11B
C/D
18S rRNA
Intronic
nop58
Danio_rerio
SNORD12
C/D
28S rRNA
Intronic
si:zfos-1451h6.1
Danio_rerio
SNORD12
C/D
28S rRNA
Intronic
rpl7
Danio_rerio
SNORD12
C/D
28S rRNA
Intronic
si:zfos-1451h6.1
Danio_rerio
SNORD12
C/D
28S rRNA
Intronic
si:zfos-1451h6.1
Danio_rerio
SNORD12
C/D
28S rRNA
Intronic
si:zfos-1451h6.1
Danio_rerio
SNORD14
C/D
18S rRNA
Intronic
hspa8
Danio_rerio
SNORD14
C/D
18S rRNA
Intronic
hspa8
Danio_rerio
SNORD14
C/D
18S rRNA
Intronic
hspa8
Danio_rerio
SNORD15
C/D
28S rRNA
Intronic
rps3
Danio_rerio
SNORD15
C/D
28S rRNA
Intronic
rps3
Danio_rerio
SNORD15
C/D
28S rRNA
Intronic
rps3
Danio_rerio
SNORD15
C/D
28S rRNA
Intronic
rps3
Danio_rerio
SNORD16
C/D
18S rRNA
Intronic
rpl4
Danio_rerio
SNORD16
C/D
18S rRNA
Intronic
rpl4
Danio_rerio
SNORD18
C/D
28S rRNA
Intronic
rpl4
Danio_rerio
SNORD18
C/D
28S rRNA
Intronic
rpl4
Danio_rerio
SNORD18
C/D
28S rRNA
Intronic
usp10
Danio_rerio
SNORD18
C/D
28S rRNA
Intronic
rpl4
Danio_rerio
SNORD18
C/D
28S rRNA
Intronic
rpl4
Danio_rerio
SNORD2
C/D
28S rRNA
Intronic
eif4a2
Danio_rerio
SNORD2
C/D
28S rRNA
Intronic
eif4a2
Danio_rerio
SNORD2
C/D
28S rRNA
Intronic
eif4a2
Danio_rerio
SNORD21
C/D
28S rRNA
Intronic
rpl5b
Danio_rerio
SNORD21
C/D
28S rRNA
Intronic
rpl5b
Danio_rerio
SNORD22
C/D
18S rRNA
Intronic
wu:fc55g01
Danio_rerio
SNORD24
C/D
28S rRNA
Intronic
rpl7a
Danio_rerio
SNORD24
C/D
28S rRNA
Intronic
rpl7a
Danio_rerio
SNORD26
C/D
28S rRNA
Intronic
wu:fc55g01
Danio_rerio
SNORD29
C/D
28S rRNA
Intronic
wu:fc55g01
Danio_rerio
SNORD3
C/D
18S rRNA
Poly
LOC101882590
Danio_rerio
SNORD3
C/D
18S rRNA
Poly
LOC101882590
Danio_rerio
SNORD30
C/D
28S rRNA
Intronic
wu:fc55g01
Danio_rerio
SNORD31
C/D
28S rRNA
Intronic
wu:fc55g01
Danio_rerio
SNORD31
C/D
28S rRNA
Intronic
wu:fc55g01
Danio_rerio
SNORD31
C/D
28S rRNA
Intronic
wu:fc55g01
Danio_rerio
SNORD33
C/D
18S rRNA
Intronic
rpl13a
Danio_rerio
SNORD33
C/D
18S rRNA
Intronic
rpl13a
Danio_rerio
SNORD35
C/D
28S rRNA
Intronic
rps11
Danio_rerio
SNORD35
C/D
28S rRNA
Intronic
rps11
Danio_rerio
SNORD35
C/D
28S rRNA
Intronic
rps11
Danio_rerio
SNORD35
C/D
28S rRNA
Intronic
rps11
Danio_rerio
SNORD36
C/D
18S rRNA
Intronic
rpl7a
Danio_rerio
SNORD36
C/D
18S rRNA
Intronic
rpl7a
Danio_rerio
SNORD37 (g)
C/D
28S rRNA
Intronic
eef2a.2
Danio_rerio
SNORD37
C/D
28S rRNA
Intronic
zgc:113191
Danio_rerio
SNORD42
C/D
18S rRNA
Intronic
rpl23a
Danio_rerio
SNORD46
C/D
28S rRNA
Intronic
rps8
Danio_rerio
SNORD47
C/D
28S rRNA
Intronic
gas5
Danio_rerio
SNORD47
C/D
28S rRNA
Intronic
gas5
Danio_rerio
SNORD49
C/D
28S rRNA
Intronic
LOC100535890
Danio_rerio
SNORD49
C/D
28S rRNA
Intronic
LOC100535890
Danio_rerio
SNORD52
C/D
28S rRNA
Intronic
si:ch211-152p11.8
Danio_rerio
SNORD52
C/D
28S rRNA
Intronic
si:ch211-152p11.8
Danio_rerio
SNORD52
C/D
28S rRNA
Intronic
si:ch211-152p11.8
Danio_rerio
SNORD52
C/D
28S rRNA
Intronic
si:ch211-152p11.8
Danio_rerio
SNORD52
C/D
28S rRNA
Intronic
si:ch211-152p11.8
Danio_rerio
SNORD52
C/D
28S rRNA
Intronic
si:ch211-152p11.8
Danio_rerio
SNORD52
C/D
28S rRNA
Intronic
si:ch211-152p11.8
Danio_rerio
SNORD52
C/D
28S rRNA
Intronic
si:ch211-152p11.8
Danio_rerio
SNORD53_SNORD92
C/D
28S rRNA
Intronic
arid4a
Danio_rerio
SNORD53_SNORD92
C/D
28S rRNA
Intronic
arid4a
Danio_rerio
SNORD53_SNORD92
C/D
28S rRNA
Intronic
arid4a
Danio_rerio
SNORD53_SNORD92
C/D
28S rRNA
Intronic
arid4a
Danio_rerio
SNORD53_SNORD92
C/D
28S rRNA
Intronic
arid4a
Danio_rerio
SNORD57
C/D
18S rRNA
Intronic
nol5a
Danio_rerio
SNORD58
C/D
28S rRNA
Intronic
wu:fa28a02
Danio_rerio
SNORD58
C/D
28S rRNA
Intronic
wu:fa28a02
Danio_rerio
SNORD58
C/D
28S rRNA
Intronic
wu:fa28a02
Danio_rerio
SNORD60
C/D
28S rRNA
Intronic
wu:fc47e11
Danio_rerio
SNORD60
C/D
28S rRNA
Intronic
wu:fc47e11
Danio_rerio
SNORD60
C/D
28S rRNA
Intronic
wu:fc47e11
Danio_rerio
SNORD61
C/D
18S rRNA
Intronic
rbmx
Danio_rerio
SNORD61
C/D
18S rRNA
Intronic
rbmx
Danio_rerio
SNORD61
C/D
18S rRNA
Intronic
rbmx
Danio_rerio
SNORD63
C/D
28S rRNA
Mono
Mono:26:SNORD63
Danio_rerio
SNORD65
C/D
18S rRNA
Intronic
LOC100534731
Danio_rerio
SNORD65
C/D
18S rRNA
Intronic
LOC100534731
Danio_rerio
SNORD66
C/D
18S rRNA
Intronic
eif4g1a
Danio_rerio
SNORD66
C/D
18S rRNA
Intronic
eif4g1a
Danio_rerio
SNORD70
C/D
18S rRNA
Intronic
nop58
Danio_rerio
SNORD72
C/D
28S rRNA
Intronic
Rpl37
Danio_rerio
SNORD72
C/D
28S rRNA
Intronic
Rpl37
Danio_rerio
SNORD74
C/D
28S rRNA
Intronic
gas5
Danio_rerio
SNORD75
C/D
28S rRNA
Intronic
gas5
Danio_rerio
SNORD75
C/D
28S rRNA
Intronic
gas5
Danio_rerio
SNORD77
C/D
28S rRNA
Intronic
gas5
Danio_rerio
SNORD77
C/D
28S rRNA
Intronic
gas5
Danio_rerio
SNORD79
C/D
28S rRNA
Intronic
gas5
Danio_rerio
SNORD79
C/D
28S rRNA
Intronic
gas5
Danio_rerio
SNORD83
C/D
Unknown
Intronic
zgc:110395
Danio_rerio
SNORD83
C/D
Unknown
Intronic
zgc:110395
Danio_rerio
SNORD83
C/D
Unknown
Intronic
zgc:110395
Danio_rerio
SNORD83
C/D
Unknown
Intronic
zgc:110395
Danio_rerio
SNORD88
C/D
28S rRNA
Intronic
si:dkey-105i19.5
Danio_rerio
SNORD94
C/D
U6 snRNA
Intronic
rrm2
Danio_rerio
SNORD94
C/D
U6 snRNA
Mono
Mono:20:SNORD94
Danio_rerio
SNORD94
C/D
U6 snRNA
Intronic
rrm2
Danio_rerio
SNORD97
C/D
Unknown
Intronic
eif4g2b
Danio_rerio
SNORD99
C/D
28S rRNA
Intronic
LOC100535315
Danio_rerio
snoU2_19
C/D
U2 snRNA
Intronic
cep295
Danio_rerio
snoU2_19
C/D
U2 snRNA
Mono
Mono:SCARNA9
Danio_rerio
snoU54
C/D
18S rRNA
Intronic
rps20
Danio_rerio
snoU6-53
C/D
U6 snRNA
Intronic
acin1b
Danio_rerio
snoU6-53
C/D
U6 snRNA
Intronic
acin1b
Danio_rerio
snoU6-53
C/D
U6 snRNA
Intronic
acin1b
Danio_rerio
snoU83B
C/D
Unknown
Intronic
rpl3
Danio_rerio
snoU85
C/D
Unknown
Intronic
ncapd2
Danio_rerio
snoU85
C/D
Unknown
Intronic
ncapd2
Danio_rerio
snoU85
C/D
Unknown
Intronic
ncapd2
Danio_rerio
snoZ30
C/D
U6 snRNA
Intronic
flj12949l
Danio_rerio
snoZ40
C/D
28S rRNA
Intronic
si:ch211-209a2.1
Danio_rerio
U3
C/D
18S rRNA
Poly
LOC101882590
Danio_rerio
U3
C/D
18S rRNA
Poly
Poly:snord3
Danio_rerio
U3
C/D
18S rRNA
Poly
Poly:snord3
Danio_rerio
U3
C/D
18S rRNA
Poly
LOC101882590
Danio_rerio
U3
C/D
18S rRNA
Poly
LOC101882590
Danio_rerio
U3
C/D
18S rRNA
Poly
LOC101882590
Danio_rerio
U3
C/D
18S rRNA
Poly
Poly:1:U3
Danio_rerio
U3
C/D
18S rRNA
Poly
Poly:1:U3
Danio_rerio
U3
C/D
18S rRNA
Poly
Poly:1:U3
Danio_rerio
U3
C/D
18S rRNA
Mono
LOC103911347
Danio_rerio
U3
C/D
18S rRNA
Poly
Poly:1:U3
Danio_rerio
U3
C/D
18S rRNA
Intronic
LOC108190128
Danio_rerio
U3
C/D
18S rRNA
Poly
LOC101882590
Danio_rerio
U3
C/D
18S rRNA
Poly
LOC101882590
Danio_rerio
U3
C/D
18S rRNA
Poly
LOC101882590
Danio_rerio
U3
C/D
18S rRNA
Poly
LOC101882590
Danio_rerio
U3
C/D
18S rRNA
Poly
LOC101882590
Danio_rerio
U3
C/D
18S rRNA
Poly
Poly:1:U3
Danio_rerio
U3
C/D
18S rRNA
Mono
Mono:18:U3
Danio_rerio
U3
C/D
18S rRNA
Poly
Poly:snord3
Danio_rerio
U3
C/D
18S rRNA
Poly
Poly:snord3
Danio_rerio
U3
C/D
18S rRNA
Poly
LOC101882590
Danio_rerio
U3
C/D
18S rRNA
Poly
Poly:snord3
Danio_rerio
U3
C/D
18S rRNA
Poly
Poly:snord3
Danio_rerio
U3
C/D
18S rRNA
Poly
Poly:snord3
Danio_rerio
U3
C/D
18S rRNA
Poly
Poly:snord3
Danio_rerio
U3
C/D
18S rRNA
Poly
Poly:snord3
Danio_rerio
U3
C/D
18S rRNA
Poly
Poly:snord3
Danio_rerio
U3
C/D
18S rRNA
Poly
Poly:1:U3
Danio_rerio
U3
C/D
18S rRNA
Poly
Poly:snord3
Danio_rerio
U3
C/D
18S rRNA
Poly
LOC101882590
Danio_rerio
U3
C/D
18S rRNA
Poly
LOC101882590
Danio_rerio
U3
C/D
18S rRNA
Poly
Poly:snord3
Danio_rerio
U3
C/D
18S rRNA
Poly
Poly:snord3
Danio_rerio
U3
C/D
18S rRNA
Poly
LOC101882590
Danio_rerio
U8
C/D
28S rRNA
Poly
Poly:7:U8
Danio_rerio
U8
C/D
28S rRNA
Poly
Poly:7:U8
Danio_rerio
U8
C/D
28S rRNA
Poly
Poly:7:U8
Danio_rerio
U8
C/D
28S rRNA
Poly
Poly:7:U8
Danio_rerio
U8
C/D
28S rRNA
Mono
Mono:8:U8
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