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BLAST
Target RNA
About
Species
Box type
Target RNA
Organization
all
Aegilops_tauschii
Arabidopsis_thaliana
Caenorhabditis_elegans
Candida_albicans
Canis_familiaris
Cavia_porcellus
Ciona_intestinalis
Ciona_savignyi
Danio_rerio
Dasypus_novemcinctus
Drosophila_melanogaster
Echinops_telfairi
Equus_caballus
Erinaceus_europaeus
Felis_catus
Gallus_gallus
Gasterosteus_aculeatus
Gorilla_gorilla
Homo_sapiens
Hordeum_vulgare
Loxodonta_africana
Macaca_mulatta
Microcebus_murinus
Monodelphis_domestica
Mus_musculus
Myotis_lucifugus
Ornithorhynchus_anatinus
Oryctolagus_cuniculus
Oryza_sativa
Oryzias_latipes
Otolemur_garnettii
Pan_troglodytes
Physcomitrium_patens
Pongo_pygmaeus
Rattus_norvegicus
Saccharomyces_cerevisiae
Schizosaccharomyces_pombe
Sorex_araneus
Spermophilus_tridecemlineatus
Tetraodon_nigroviridis
Triticum_aestivum
Triticum_dicoccoides
Tupaia_belangeri
Tursiops_truncatus
Varanus_komodoensis
Xenopus_tropicalis
all
C/D
H/ACA
unknown
all
18S rRNA
28S rRNA
5.8S rRNA
U3 snoRNA
U4 snRNA
18S rRNA
18S rRNA
18SrRNA
25S rRNA
25S rRNA
25SrRNA
26S rRNA
28S rRN
28S rRNA
5'External Transcribed Spacer (ETS)
5.8S rRNA
?28S rRNA
Nonfunctional
U1 snRNA
U12 snRNA
U2 snRNA
U3
U3 snoRNA
U4 snRNA
U5 snRNA
U6 snRNA
Unknown
5.8S rRNA
all
Intronic
Mono
Poly
Keywords
Curation status
Locus View
all
curated
Species
snoRNA name
Box
Target RNA
Organization
Locus
Ciona_intestinalis
SNORA16B/SNORA16A
H/ACA
28S rRNA
Intronic
LOC100178199
Ciona_intestinalis
SNORA53
H/ACA
Intronic
LOC100185895
Ciona_intestinalis
SNORD111
C/D
Intronic
ENSCING00000003982
Ciona_intestinalis
SNORD111
C/D
Intronic
ENSCING00000003982
Ciona_intestinalis
SNORD111
C/D
Intronic
ENSCING00000003982
Ciona_intestinalis
SNORD14
C/D
Intronic
ENSCING00000000145
Ciona_intestinalis
SNORD14
C/D
Intronic
ENSCING00000000145
Ciona_intestinalis
SNORD14
C/D
Intronic
ENSCING00000000145
Ciona_intestinalis
SNORD14
C/D
Intronic
ENSCING00000006512
Ciona_intestinalis
SNORD14
C/D
Intronic
ENSCING00000006512
Ciona_intestinalis
SNORD14
C/D
Intronic
ENSCING00000006512
Ciona_intestinalis
SNORD14
C/D
Intronic
ENSCING00000006512
Ciona_intestinalis
SNORD14
C/D
Intronic
ENSCING00000006512
Ciona_intestinalis
SNORD14
C/D
Intronic
ENSCING00000012576
Ciona_intestinalis
SNORD14
C/D
Intronic
ENSCING00000012576
Ciona_intestinalis
SNORD16
C/D
18S rRNA
Intronic
LOC100185025
Ciona_intestinalis
SNORD18
C/D
Intronic
ENSCING00000007592
Ciona_intestinalis
SNORD18
C/D
Intronic
ENSCING00000017082
Ciona_intestinalis
SNORD18
C/D
28S rRNA
Intronic
LOC100181121
Ciona_intestinalis
SNORD18
C/D
28S rRNA
Intronic
LOC100181121
Ciona_intestinalis
SNORD18
C/D
28S rRNA
Intronic
LOC100182042
Ciona_intestinalis
SNORD18
C/D
28S rRNA
Intronic
LOC100182042
Ciona_intestinalis
SNORD24
C/D
28S rRNA
Intronic
LOC100186345
Ciona_intestinalis
SNORD31
C/D
28S rRNA
Intronic
LOC100184318
Ciona_intestinalis
SNORD35
C/D
28S rRNA
Intronic
LOC100176033
Ciona_intestinalis
SNORD61
C/D
18S rRNA
Mono
Mono2:SNORD61
Ciona_intestinalis
SNORD67
C/D
Intronic
LOC100180684
Ciona_intestinalis
SNORD83
C/D
Intronic
LOC100177734
Ciona_intestinalis
snoZ195
C/D
18S rRNA
Intronic
LOC101243418
Ciona_intestinalis
snoZ195
C/D
18S rRNA
Intronic
LOC101243418
Ciona_intestinalis
snoZ195
C/D
18S rRNA
Intronic
LOC101243418
Ciona_intestinalis
U13
Mono
Mono1:U13
Ciona_intestinalis
U3
Intronic
LOC100183160
Ciona_intestinalis
U3
Poly
Poly1:U3
Ciona_intestinalis
U3
Poly
Poly1:U3
Ciona_intestinalis
U3
Poly
Poly1:U3
Ciona_intestinalis
U3
Poly
Poly1:U3
Ciona_intestinalis
U3
Poly
Poly1:U3
Ciona_intestinalis
U3
Poly
Poly1:U3
Ciona_intestinalis
U3
Poly
Poly1:U3
Ciona_intestinalis
U3
Poly
Poly1:U3
Ciona_intestinalis
U3
Poly
Poly1:U3
Ciona_intestinalis
U3
Poly
Poly1:U3
Ciona_intestinalis
U3
Poly
Poly1:U3
Ciona_intestinalis
U3
Poly
Poly1:U3
Ciona_intestinalis
U3
Poly
Poly1:U3
Ciona_intestinalis
U6-53/MBII-28
C/D
Intronic
LOC100187062
Ciona_intestinalis
U6-53/MBII-28
C/D
Mono
Mono3:U6-53/MBII-28
Ciona_intestinalis
U8
Intronic
LOC100182763
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