HOME
Orthologs
Search
BLAST
Target RNA
About
Species
Box type
Target RNA
Organization
all
Aegilops_tauschii
Arabidopsis_thaliana
Caenorhabditis_elegans
Canis_familiaris
Cavia_porcellus
Ciona_intestinalis
Ciona_savignyi
Danio_rerio
Dasypus_novemcinctus
Drosophila_melanogaster
Echinops_telfairi
Equus_caballus
Erinaceus_europaeus
Felis_catus
Gallus_gallus
Gasterosteus_aculeatus
Gorilla_gorilla
Homo_sapiens
Hordeum_vulgare
Loxodonta_africana
Macaca_mulatta
Microcebus_murinus
Monodelphis_domestica
Mus_musculus
Myotis_lucifugus
Ornithorhynchus_anatinus
Oryctolagus_cuniculus
Oryza_sativa
Oryzias_latipes
Otolemur_garnettii
Pan_troglodytes
Physcomitrium_patens
Pongo_pygmaeus
Rattus_norvegicus
Saccharomyces_cerevisiae
Schizosaccharomyces_pombe
Sorex_araneus
Spermophilus_tridecemlineatus
Tetraodon_nigroviridis
Triticum_aestivum
Triticum_dicoccoides
Tupaia_belangeri
Xenopus_tropicalis
all
C/D
H/ACA
unknown
all
18S rRNA
28S rRNA
5.8S rRNA
U3 snoRNA
U4 snRNA
18S rRNA
18S rRNA
18SrRNA
25S rRNA
25S rRNA
25SrRNA
26S rRNA
28S rRN
28S rRNA
5'External Transcribed Spacer (ETS)
5.8S rRNA
?28S rRNA
Nonfunctional
U1 snRNA
U12 snRNA
U2 snRNA
U3
U3 snoRNA
U4 snRNA
U5 snRNA
U6 snRNA
Unknown
5.8S rRNA
all
Intronic
Mono
Poly
Keywords
Curation status
Locus View
all
curated
Species
snoRNA name
Box
Target RNA
Organization
Locus
Caenorhabditis_elegans
B0041.9
C/D
26S rRNA
Intronic
rpl-4
Caenorhabditis_elegans
B0213.18
H/ACA
26S rRNA
Mono
Mono:37:B0213.18
Caenorhabditis_elegans
B0334.12 (CeN118)
C/D
26S rRNA
Mono
Mono:18:B0334.12
Caenorhabditis_elegans
B0393.10 (CeN105)
H/ACA
U5 snRNA
Intronic
B0393.3
Caenorhabditis_elegans
B0412.6 (cer-6)
H/ACA
18S rRNA
Intronic
rps-29
Caenorhabditis_elegans
B0412.7 (CeN110)
H/ACA
18S rRNA,26S rRNA
Intronic
rps-29
Caenorhabditis_elegans
C04G6.12
C/D
18S rRNA
Mono
Mono:10:C04G6.12
Caenorhabditis_elegans
C07A9.14 (CeN30)
C/D
26S rRNA
Mono
Mono:27:C07A9.14
Caenorhabditis_elegans
C07H6.10 (CeN89)
C/D
U2 snRNA
Intronic
cgh-1
Caenorhabditis_elegans
C08D8.3 (CeN27)
C/D
18S rRNA
Intronic
C08D8.1
Caenorhabditis_elegans
C10C6.8 (CeN39)
H/ACA
26S rRNA
Intronic
C10C6.6
Caenorhabditis_elegans
C14C10.8 (CeN126)
H/ACA
26S rRNA
Intronic
ril-2
Caenorhabditis_elegans
C16A3.11
H/ACA
26S rRNA
Intronic
rps-13
Caenorhabditis_elegans
C16D9.10 (CeN122)
C/D
26S rRNA
Mono
Mono:38:C16D9.10
Caenorhabditis_elegans
C16D9.11 (Ce86, CeN35)
C/D
18S rRNA
Intronic
rol-3
Caenorhabditis_elegans
C18A3.12 (CeN24)
C/D
26S rRNA
Mono
Mono:11:C18A3.12
Caenorhabditis_elegans
C27H5.9 (CeN63, Cb75)
C/D
26S rRNA
Poly
Poly:C27H5.10
Caenorhabditis_elegans
C27H6.5 (Ce67,CeN136)
C/D
18S rRNA
Intronic
unc-41
Caenorhabditis_elegans
C41C4.11
C/D
18S rRNA
Mono
Mono:14:C41C4.11
Caenorhabditis_elegans
C46C2.8 (CeN50-1)
C/D
26S rRNA
Mono
Mono:35:C46C2.8
Caenorhabditis_elegans
C50C3.13
H/ACA
U2 snRNA,U5 snRNA
Intronic
prp-8
Caenorhabditis_elegans
C50C3.14
H/ACA
U2 snRNA
Intronic
prp-8
Caenorhabditis_elegans
C51F7.3 (CeN123)
C/D
26S rRNA
Intronic
frm-7
Caenorhabditis_elegans
C53B7.8
C/D
26S rRNA
Mono
Mono:44:C53B7.8
Caenorhabditis_elegans
C55F2.3
C/D
26S rRNA
Mono
Mono:32:C55F2.3
Caenorhabditis_elegans
CeSSU-970 (CeN64)
H/ACA
18S rRNA,26S rRNA
Intronic
C05D2.6
Caenorhabditis_elegans
D1046.6 (CeN55)
H/ACA
26S rRNA
Intronic
D1046.1
Caenorhabditis_elegans
D1054.17 (CeN69)
C/D
U2 snRNA
Intronic
D1054.3
Caenorhabditis_elegans
E01A2.9
H/ACA
18S rRNA
Intronic
E01A2.6
Caenorhabditis_elegans
F01D5.12 (CeN28)
C/D
26S rRNA
Intronic
F01D5.10
Caenorhabditis_elegans
F12F6.11
C/D
18S rRNA
Mono
Mono:36:F12F6.11
Caenorhabditis_elegans
F17C11.14 (CeN81)
H/ACA
26S rRNA
Intronic
F17C11.9
Caenorhabditis_elegans
F19H8.6
C/D
18S rRNA
Intronic
F19H8.4
Caenorhabditis_elegans
F22D6.16
H/ACA
U6 snRNA
Intronic
prpf-4
Caenorhabditis_elegans
F28C6.11 (CeN93)
H/ACA
26S rRNA
Intronic
rpl-26
Caenorhabditis_elegans
F28D1.13
H/ACA
26S rRNA
Intronic
rps-23
Caenorhabditis_elegans
F30H5.4 (CeN15)
C/D
26S rRNA
Mono
Mono:22:F30H5.4
Caenorhabditis_elegans
F32E10.10
C/D
26S rRNA
Mono
Mono:31:F32E10.10
Caenorhabditis_elegans
F38E11.14
C/D
26S rRNA
Intronic
cng-3
Caenorhabditis_elegans
F53G12.12 (CeN87)
H/ACA
26S rRNA
Intronic
rpl-7
Caenorhabditis_elegans
F54C9.12 (CeN108)
C/D
18S rRNA
Intronic
iff-2
Caenorhabditis_elegans
F55A11.10 (CeN124)
C/D
26S rRNA
Intronic
F55A11.6
Caenorhabditis_elegans
F56C9.12 (CeN17)
C/D
26S rRNA
Mono
Mono:25:F56C9.12
Caenorhabditis_elegans
H06I04.8 (CeN106)
C/D
18S rRNA
Intronic
ubl-1
Caenorhabditis_elegans
H09I01.2 (CeN14)
C/D
26S rRNA
Mono
Mono:33:H09I01.2
Caenorhabditis_elegans
JC8.15
H/ACA
U4 snRNA
Intronic
tag-115
Caenorhabditis_elegans
K02C4.7
C/D
18S rRNA
Mono
Mono:13:K02C4.7
Caenorhabditis_elegans
K02C4.8 (CeN51)
H/ACA
26S rRNA
Mono
Mono:12:K02C4.8
Caenorhabditis_elegans
K07C10.2
C/D
26S rRNA
Mono
Mono:17:K07C10.2
Caenorhabditis_elegans
K07C5.10
H/ACA
26S rRNA
Intronic
K07C5.4
Caenorhabditis_elegans
K07C5.11
H/ACA
18S rRNA
Intronic
K07C5.4
Caenorhabditis_elegans
K07C5.12 (CeN101)
H/ACA
18S rRNA
Intronic
K07C5.4
Caenorhabditis_elegans
K08E3.11
C/D
26S rRNA
Intronic
cyk-4
Caenorhabditis_elegans
K11C4.6
C/D
26S rRNA
Intronic
unc-70
Caenorhabditis_elegans
K11H12.12 (CeN84)
H/ACA
26S rRNA
Intronic
rpl-15
Caenorhabditis_elegans
K11H12.13
H/ACA
26S rRNA
Intronic
rpl-15
Caenorhabditis_elegans
K12D12.7 (CeN128)
H/ACA
U5 snRNA
Intronic
top-2
Caenorhabditis_elegans
K12D12.8
C/D
U5 snRNA
Intronic
top-2
Caenorhabditis_elegans
M106.6 (CeN119)
C/D
26S rRNA
Intronic
mix-1
Caenorhabditis_elegans
R12E2.17 (CeN54)
C/D
26S rRNA
Intronic
rpn-8
Caenorhabditis_elegans
R151.11 (CeN100)
H/ACA
26S rRNA
Intronic
rpl-6
Caenorhabditis_elegans
R151.12 (CeN80)
H/ACA
18S rRNA
Intronic
rpl-6
Caenorhabditis_elegans
R151.13 (CeN79)
H/ACA
18S rRNA
Intronic
rpl-6
Caenorhabditis_elegans
T02E1.9
C/D
Mono
Mono:6:T02E1.9
Caenorhabditis_elegans
T03F7.8
C/D
26S rRNA
Mono
Mono:39:T03F7.8
Caenorhabditis_elegans
T06C12.16 (CeN70)
C/D
26S rRNA
Mono
Mono:43:T06C12.16
Caenorhabditis_elegans
T06D8.11 (CeN120)
C/D
26S rRNA
Intronic
T06D8.3
Caenorhabditis_elegans
T08B2.13 (CeN43)
H/ACA
26S rRNA
Intronic
frs-1
Caenorhabditis_elegans
T10B9.11
C/D
26S rRNA
Mono
Mono:16:T10B9.11
Caenorhabditis_elegans
T19B4.8
C/D
26S rRNA
Mono
Mono:3:T19B4.8
Caenorhabditis_elegans
T24H7.6 (CeN58)
H/ACA
26S rRNA
Intronic
T24H7.2
Caenorhabditis_elegans
T27A3.9
C/D
26S rRNA
Mono
Mono:5:T27A3.9
Caenorhabditis_elegans
W04D2.7
C/D
26S rRNA
Intronic
inx-11
Caenorhabditis_elegans
W05B2.9
C/D
U6 snRNA
Mono
Mono:29:W05B2.9
Caenorhabditis_elegans
W08G11.6 (CeN41)
H/ACA
18S rRNA,26S rRNA
Intronic
W08G11.3
Caenorhabditis_elegans
Y116A8C.50 (CeN98)
C/D
U6 snRNA
Intronic
uaf-2
Caenorhabditis_elegans
Y37E3.20 (CeN33)
C/D
18S rRNA
Intronic
Y37E3.11
Caenorhabditis_elegans
Y37E3.21 (CeN95)
H/ACA
Unknown
Intronic
Y37E3.8
Caenorhabditis_elegans
Y37E3.22 (CeN88)
H/ACA,C/D
Unknown
Intronic
Y37E3.8
Caenorhabditis_elegans
Y39G10AR.24 (CeN65)
C/D
18S rRNA
Mono
Mono:1:Y39G10AR.24
Caenorhabditis_elegans
Y43F8C.22 (CeN125)
H/ACA
18S rRNA,26S rRNA
Intronic
Y43F8C.7
Caenorhabditis_elegans
Y53F4B.47 (CeN23-1)
C/D
26S rRNA
Mono
Mono:20:Y53F4B.47
Caenorhabditis_elegans
Y55F3BR.9 (CeN121)
C/D
26S rRNA
Mono
Mono:30:Y55F3BR.9
Caenorhabditis_elegans
Y62F5A.11
C/D
U2 snRNA
Intronic
mdt-8
Caenorhabditis_elegans
Y71D11A.7 (CeN13)
C/D
26S rRNA
Intronic
Y71D11A.3
Caenorhabditis_elegans
Y71F9AM.7 (CeN59)
H/ACA
18S rRNA
Intronic
cogc-3
Caenorhabditis_elegans
Y74C9A.6 (CeN117)
C/D
26S rRNA
Mono
Mono:0:Y74C9A.6
Caenorhabditis_elegans
ZK265.10
C/D
26S rRNA
Mono
Mono:7:ZK265.10
Caenorhabditis_elegans
ZK484.9
C/D
26S rRNA
Mono
Mono:4:ZK484.9
Caenorhabditis_elegans
ZK546.18 (CeN48)
H/ACA
18S rRNA
Intronic
mdt-4
Caenorhabditis_elegans
ZK994.7
C/D
26S rRNA
Intronic
pxn-1
Copyright © 2008 Medical Biology, Faculty of Medicine, University of Miyazaki, All rights reserved