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BLAST
Target RNA
About
Species
Box type
Target RNA
Organization
all
Aegilops_tauschii
Arabidopsis_thaliana
Caenorhabditis_elegans
Canis_familiaris
Cavia_porcellus
Ciona_intestinalis
Ciona_savignyi
Danio_rerio
Dasypus_novemcinctus
Drosophila_melanogaster
Echinops_telfairi
Equus_caballus
Erinaceus_europaeus
Felis_catus
Gallus_gallus
Gasterosteus_aculeatus
Gorilla_gorilla
Homo_sapiens
Hordeum_vulgare
Loxodonta_africana
Macaca_mulatta
Microcebus_murinus
Monodelphis_domestica
Mus_musculus
Myotis_lucifugus
Ornithorhynchus_anatinus
Oryctolagus_cuniculus
Oryza_sativa
Oryzias_latipes
Otolemur_garnettii
Pan_troglodytes
Physcomitrium_patens
Pongo_pygmaeus
Rattus_norvegicus
Saccharomyces_cerevisiae
Schizosaccharomyces_pombe
Sorex_araneus
Spermophilus_tridecemlineatus
Tetraodon_nigroviridis
Triticum_aestivum
Triticum_dicoccoides
Tupaia_belangeri
Xenopus_tropicalis
all
C/D
H/ACA
unknown
all
18S rRNA
28S rRNA
5.8S rRNA
U3 snoRNA
U4 snRNA
18S rRNA
18S rRNA
18SrRNA
25S rRNA
25S rRNA
25SrRNA
26S rRNA
28S rRN
28S rRNA
5'External Transcribed Spacer (ETS)
5.8S rRNA
?28S rRNA
Nonfunctional
U1 snRNA
U12 snRNA
U2 snRNA
U3
U3 snoRNA
U4 snRNA
U5 snRNA
U6 snRNA
Unknown
5.8S rRNA
all
Intronic
Mono
Poly
Keywords
Curation status
Locus View
all
curated
Species
snoRNA name
Box
Target RNA
Organization
Locus
Arabidopsis_thaliana
39BYa
C/D
5.8S rRNA,25S rRNA
Poly
Poly:39BYa
Arabidopsis_thaliana
39BYb
C/D
5.8S rRNA,25S rRNA
Poly
Poly:39BYb
Arabidopsis_thaliana
AT5G00760
C/D
Intronic
AT5G01350
Arabidopsis_thaliana
R71.67
C/D
18S rRNA
Mono
Mono:R71.67
Arabidopsis_thaliana
R71.69
C/D
18S rRNA
Mono
Mono:R71.69
Arabidopsis_thaliana
R72b
C/D
25S rRNA
Mono
Mono:R72b
Arabidopsis_thaliana
R72b-2
C/D
25S rRNA
Mono
Mono:R72b-2
Arabidopsis_thaliana
R72c
C/D
25S rRNA
Mono
Mono:R72c
Arabidopsis_thaliana
R72d
C/D
25S rRNA
Mono
Mono:R72d
Arabidopsis_thaliana
R72e
C/D
25S rRNA
Mono
Mono:R43d
Arabidopsis_thaliana
R79b
C/D
25S rRNA
Intronic
AT5G28320
Arabidopsis_thaliana
R79b-2
C/D
25S rRNA
Intronic
AT3G61780
Arabidopsis_thaliana
R79c
C/D
25S rRNA
Intronic
AT5G28400
Arabidopsis_thaliana
SnoR10-1
C/D
25S rRNA
Poly
Poly:SnoR9-1
Arabidopsis_thaliana
SnoR10-2
C/D
18S rRNA,25S rRNA
Poly
Poly:SnoR9-2
Arabidopsis_thaliana
SnoR101
C/D
U2 snRNA,25S rRNA
Mono
Mono:SnoR101
Arabidopsis_thaliana
SnoR102
C/D
U5 snRNA,18S rRNA
Mono
Mono:SnoR102
Arabidopsis_thaliana
SnoR102-2
C/D
U5 snRNA,18S rRNA
Mono
Mono:SnoR102-2
Arabidopsis_thaliana
SnoR105
C/D
25S rRNA
Mono
Mono:SnoR105
Arabidopsis_thaliana
SnoR106
C/D
25S rRNA
Mono
Mono:SnoR106
Arabidopsis_thaliana
SnoR107
C/D
25S rRNA
Intronic
EMB2757/TAN
Arabidopsis_thaliana
SnoR108
C/D
18S rRNA
Mono
Mono:SnoR108
Arabidopsis_thaliana
SnoR11
C/D
18S rRNA
Poly
Poly:SnoR9-1
Arabidopsis_thaliana
SnoR12-1a
C/D
25S rRNA
Poly
Poly:SnoR12-1a
Arabidopsis_thaliana
SnoR12-1b
C/D
25S rRNA
Poly
Poly:SnoR12-1a
Arabidopsis_thaliana
SnoR12-2
C/D
25S rRNA
Poly
Poly:SnoR12-2
Arabidopsis_thaliana
SnoR13-1
C/D
18S rRNA,25S rRNA
Poly
Poly:SnoR13-1
Arabidopsis_thaliana
SnoR13-2
C/D
18S rRNA,25S rRNA
Poly
Poly:SnoR13-2
Arabidopsis_thaliana
SnoR14-1
C/D
18S rRNA,25S rRNA
Poly
Poly:U61
Arabidopsis_thaliana
SnoR14-2
C/D
18S rRNA,25S rRNA
Poly
Poly:U61-2
Arabidopsis_thaliana
SnoR15
C/D
18S rRNA,25S rRNA
Poly
Poly:U61-2
Arabidopsis_thaliana
SnoR16-1
C/D
25S rRNA
Poly
Poly:SnoR16-1
Arabidopsis_thaliana
SnoR16-2
C/D
25S rRNA
Poly
poly:SnoR16-1
Arabidopsis_thaliana
SnoR17
C/D
18S rRNA
Poly
poly:SnoR44-2
Arabidopsis_thaliana
SnoR18a
C/D
25S rRNA,18S rRNA
Poly
poly:SnoR18a
Arabidopsis_thaliana
SnoR18b
C/D
25S rRNA,18S rRNA
Poly
poly:SnoR18a
Arabidopsis_thaliana
SnoR19-1
C/D
18S rRNA
Poly
poly:SnoR88-1
Arabidopsis_thaliana
SnoR19-2
C/D
18S rRNA
Poly
poly:SnoR88-2
Arabidopsis_thaliana
SnoR1a
C/D
25S rRNA,18S rRNA
Poly
poly:SnoR18a
Arabidopsis_thaliana
SnoR1b
C/D
25S rRNA,18S rRNA
Poly
poly:SnoR18a
Arabidopsis_thaliana
SnoR20-1
C/D
18S rRNA
Poly
poly:SnoR88-2
Arabidopsis_thaliana
SnoR20-2
C/D
18S rRNA
Poly
poly:SnoR88-1
Arabidopsis_thaliana
SnoR21a
C/D
18S rRNA,25S rRNA
Poly
Poly:39BYa
Arabidopsis_thaliana
SnoR21b
C/D
18S rRNA
Poly
Poly:39BYb
Arabidopsis_thaliana
SnoR22-2
C/D
25S rRNA
Poly
poly:SnoR37-3
Arabidopsis_thaliana
SnoR22-3a
C/D
25S rRNA
Poly
poly:SnoR37-2
Arabidopsis_thaliana
SnoR22-3b
C/D
25S rRNA
Poly
poly:SnoR37-2
Arabidopsis_thaliana
SnoR23-1
C/D
18S rRNA
Poly
Poly:SnoR37-1
Arabidopsis_thaliana
SnoR23-2
C/D
18S rRNA,25S rRNA
Poly
poly:SnoR37-3
Arabidopsis_thaliana
SnoR23-3
C/D
18S rRNA,25S rRNA
Poly
poly:SnoR37-2
Arabidopsis_thaliana
SnoR24-pseud
C/D
25S rRNA
Mono
Mono:U24e
Arabidopsis_thaliana
SnoR24a
C/D
25S rRNA
Poly
Mono:U24e
Arabidopsis_thaliana
SnoR24b
C/D
25S rRNA
Poly
Mono:U24e
Arabidopsis_thaliana
SnoR24c
C/D
25S rRNA
Poly
Mono:U24e
Arabidopsis_thaliana
SnoR24d
C/D
25S rRNA
Poly
Mono:U24e
Arabidopsis_thaliana
SnoR25
C/D
18S rRNA
Poly
poly:SnoR69Y
Arabidopsis_thaliana
SnoR26
C/D
25S rRNA, 18S rRNA
Poly
Poly:SnoR68Y
Arabidopsis_thaliana
SnoR27
C/D
25S rRNA,18S rRNA
Poly
Poly:SnoR68Y
Arabidopsis_thaliana
SnoR28-1a
C/D
25S rRNA,18S rRNA
Poly
Poly:SnoR28-1a
Arabidopsis_thaliana
SnoR28-1b
C/D
25S rRNA, 18S rRNA
Poly
Poly:SnoR28-1a
Arabidopsis_thaliana
SnoR28-1c
C/D
18S rRNA
Poly
Poly:SnoR28-1a
Arabidopsis_thaliana
SnoR28-2a
C/D
Unknown
Poly
Poly:SnoR28-2a
Arabidopsis_thaliana
SnoR28-2b
C/D
18S rRNA,25S rRNA
Poly
Poly:SnoR28-2a
Arabidopsis_thaliana
SnoR29-1
C/D
25S rRNA
Poly
Poly:SnoR28-2a
Arabidopsis_thaliana
SnoR29-2
C/D
25S rRNA
Mono
Mono:SnoR29-2
Arabidopsis_thaliana
SnoR30
C/D
18S rRNA,25S rRNA
Poly
Poly:SnoR28-2a
Arabidopsis_thaliana
SNOR30
C/D
18S rRNA,25S rRNA
Poly
Poly:SnoR28-2a
Arabidopsis_thaliana
SnoR31
C/D
25S rRNA
Poly
Poly:SnoR28-2a
Arabidopsis_thaliana
SnoR32-1
C/D
18S rRNA
Poly
poly:SnoR32-1
Arabidopsis_thaliana
SnoR32-2
C/D
18S rRNA
Poly
poly:SnoR32-2
Arabidopsis_thaliana
SnoR33
C/D
25S rRNA
Mono
Mono:SnoR33
Arabidopsis_thaliana
SnoR34
C/D
18S rRNA,25S rRNA
Mono
Mono:SnoR34
Arabidopsis_thaliana
SnoR35
C/D
18S rRNA,25S rRNA
Intronic
AT1G07705
Arabidopsis_thaliana
SnoR36
C/D
25S rRNA
Poly
poly:41Y
Arabidopsis_thaliana
SnoR37-1
C/D
25S rRNA
Poly
Poly:SnoR37-1
Arabidopsis_thaliana
SnoR37-2
C/D
25S rRNA
Poly
poly:SnoR37-2
Arabidopsis_thaliana
SnoR38Y-1
C/D
18S rRNA
Poly
poly:SnoR88-2
Arabidopsis_thaliana
SnoR38Y-2
C/D
25S rRNA
Poly
poly:SnoR88-1
Arabidopsis_thaliana
SnoR41Y
C/D
18S rRNA,25S rRNA
Poly
poly:41Y
Arabidopsis_thaliana
SnoR44-1a
C/D
25S rRNA
Poly
poly:SnoR44-1a
Arabidopsis_thaliana
SnoR44-1b
C/D
25S rRNA
Poly
poly:SnoR44-1a
Arabidopsis_thaliana
SnoR44-2
C/D
25S rRNA
Poly
poly:SnoR44-2
Arabidopsis_thaliana
SnoR44-3
C/D
25S rRNA
Mono
Mono:U79-3
Arabidopsis_thaliana
SnoR4a
C/D
5.8S rRNA
Poly
poly:U31a
Arabidopsis_thaliana
SnoR4b
C/D
5.8S rRNA
Poly
poly:U31b
Arabidopsis_thaliana
SnoR53Y
C/D
25S rRNA,18S rRNA
Poly
poly:SnoR69Y
Arabidopsis_thaliana
SnoR58Y-1
C/D
25S rRNA
Poly
Poly:SnoR13-1
Arabidopsis_thaliana
SnoR58Y-2
C/D
25S rRNA
Poly
Poly:SnoR13-2
Arabidopsis_thaliana
SnoR59a
C/D
18S rRNA,25S rRNA
Poly
Poly:SnoR59a
Arabidopsis_thaliana
SnoR59b
C/D
18S rRNA,25S rRNA
Poly
Poly:SnoR59a
Arabidopsis_thaliana
SnoR6-1
C/D
25S rRNA,18S rRNA
Poly
poly:U36a-1
Arabidopsis_thaliana
SnoR6-2
C/D
25S rRNA,18S rRNA
Poly
poly:U36a-2
Arabidopsis_thaliana
SnoR6-3
C/D
18S rRNA
Poly
poly:U36a-3
Arabidopsis_thaliana
SnoR64
C/D
25S rRNA
Poly
poly:SnoR88-2
Arabidopsis_thaliana
SnoR65
C/D
25S rRNA
Mono
Mono:SnoR65
Arabidopsis_thaliana
SnoR66
C/D
18S rRNA
Mono
Mono:SnoR66
Arabidopsis_thaliana
SnoR67
C/D
18S rRNA
Mono
Mono:SnoR67
Arabidopsis_thaliana
SnoR68
C/D
25S rRNA
Mono
Mono:SnoR68
Arabidopsis_thaliana
SnoR68Y
C/D
25S rRNA
Poly
Poly:SnoR68Y
Arabidopsis_thaliana
SnoR69Y
C/D
25S rRNA
Poly
poly:SnoR69Y
Arabidopsis_thaliana
SnoR7-1
C/D
25S rRNA,18S rRNA
Poly
poly:U15-1a
Arabidopsis_thaliana
SnoR7-2
C/D
25S rRNA,18S rRNA
Poly
poly:U15-2
Arabidopsis_thaliana
SnoR72Ya
C/D
25S rRNA,18S rRNA
Poly
Poly:72Ya
Arabidopsis_thaliana
SnoR72Yb
C/D
25S rRNA
Poly
Poly:72Ya
Arabidopsis_thaliana
SnoR72Yc
C/D
25S rRNA
Poly
Poly:72Ya
Arabidopsis_thaliana
SnoR72Yd
C/D
25S rRNA,18S rRNA
Poly
Poly:72Ya
Arabidopsis_thaliana
SnoR77Y-1
C/D
18S rRNA,25S rRNA
Poly
poly:U49-1
Arabidopsis_thaliana
SnoR77Y-2
C/D
18S rRNA
Poly
poly:U49-2
Arabidopsis_thaliana
SnoR77Y-3
C/D
18S rRNA
Poly
poly:U49-3
Arabidopsis_thaliana
SnoR8a
C/D
18S rRNA
Poly
poly:SnoR18a
Arabidopsis_thaliana
SnoR8b
C/D
18S rRNA
Poly
poly:SnoR18a
Arabidopsis_thaliana
SnoR9-1
C/D
5.8S rRNA
Poly
Poly:SnoR9-1
Arabidopsis_thaliana
SnoR9-2
C/D
5.8S rRNA,18S rRNA
Poly
Poly:SnoR9-2
Arabidopsis_thaliana
U14a
C/D
18S rRNA,25S rRNA
Poly
poly:U14a
Arabidopsis_thaliana
U14b
C/D
18S rRNA,25S rRNA
Poly
poly:U14a
Arabidopsis_thaliana
U14c
C/D
18S rRNA
Poly
poly:U14a
Arabidopsis_thaliana
U14d
C/D
18S rRNA
Poly
poly:U14a
Arabidopsis_thaliana
U15-1a
C/D
25S rRNA
Poly
poly:U15-1a
Arabidopsis_thaliana
U15-1b
C/D
25S rRNA
Poly
poly:U15-1a
Arabidopsis_thaliana
U15-2
C/D
25S rRNA
Poly
poly:U15-2
Arabidopsis_thaliana
U16
C/D
18S rRNA
Poly
Poly:U61
Arabidopsis_thaliana
U18-1
C/D
25S rRNA,18S rRNA
Poly
Poly:SnoR13-1
Arabidopsis_thaliana
U18-2
C/D
25S rRNA,18S rRNA
Poly
Poly:SnoR13-2
Arabidopsis_thaliana
U24-1
C/D
25S rRNA
Poly
Poly:SnoR12-1a
Arabidopsis_thaliana
U24-2
C/D
25S rRNA
Poly
Poly:SnoR12-2
Arabidopsis_thaliana
U27-1
C/D
18S rRNA
Poly
poly:SnoR32-1
Arabidopsis_thaliana
U29
C/D
25S rRNA
Poly
poly:SnoR69Y
Arabidopsis_thaliana
U30
C/D
25S rRNA
Mono
mono:U30
Arabidopsis_thaliana
U31a
C/D
25S rRNA,18S rRNA
Poly
poly:U31a
Arabidopsis_thaliana
U31b
C/D
25S rRNA,18S rRNA
Poly
poly:U31b
Arabidopsis_thaliana
U33a
C/D
18S rRNA,25S rRNA
Poly
poly:U31a
Arabidopsis_thaliana
U33b
C/D
18S rRNA,25S rRNA
Poly
poly:U31b
Arabidopsis_thaliana
U34a
C/D
25S rRNA
Poly
poly:U34a
Arabidopsis_thaliana
U34b
C/D
25S rRNA
Poly
poly:U34a
Arabidopsis_thaliana
U34c
C/D
25S rRNA
Poly
poly:U34a
Arabidopsis_thaliana
U34d
C/D
25S rRNA
Mono
Mono:U34d
Arabidopsis_thaliana
U35
C/D
25S rRNA
Mono
Mono:U35
Arabidopsis_thaliana
U36
C/D
18S rRNA
Mono
Mono:U36
Arabidopsis_thaliana
U36a-1
C/D
25S rRNA
Poly
poly:U36a-1
Arabidopsis_thaliana
U36a-2
C/D
25S rRNA
Poly
poly:U36a-2
Arabidopsis_thaliana
U36a-3
C/D
25S rRNA
Poly
poly:U36a-3
Arabidopsis_thaliana
U37
C/D
25S rRNA,18S rRNA
Poly
Poly:SnoR111
Arabidopsis_thaliana
U38-1
C/D
25S rRNA
Poly
poly:U36a-2
Arabidopsis_thaliana
U38-2
C/D
25S rRNA
Poly
poly:U36a-1
Arabidopsis_thaliana
U38-3
C/D
25S rRNA,18S rRNA
Poly
poly:U36a-3
Arabidopsis_thaliana
U40-2
C/D
25S rRNA
Mono
Mono:U40-2
Arabidopsis_thaliana
U43-1
C/D
18S rRNA
Poly
Poly:SnoR16-1
Arabidopsis_thaliana
U43-2
C/D
18S rRNA
Poly
poly:SnoR16-1
Arabidopsis_thaliana
U49-1
C/D
25S rRNA
Poly
poly:U49-1
Arabidopsis_thaliana
U49-2
C/D
25S rRNA
Poly
poly:U49-2
Arabidopsis_thaliana
U49-3
C/D
25S rRNA
Poly
poly:U49-3
Arabidopsis_thaliana
U51a
C/D
25S rRNA
Poly
poly:U31a
Arabidopsis_thaliana
U51b
C/D
25S rRNA
Poly
poly:U31b
Arabidopsis_thaliana
U53
C/D
25S rRNA
Intronic
AT3G14470
Arabidopsis_thaliana
U54
C/D
18S rRNA
Poly
Poly:SnoR13-1
Arabidopsis_thaliana
U55
C/D
25S rRNA
Poly
Poly:U61
Arabidopsis_thaliana
U56
C/D
18S rRNA
Intronic
RNA recognition motif (RRM)-containing protein
Arabidopsis_thaliana
U60.1F
C/D
25S rRNA
Intronic
FIB1 (FIBRILLARIN 1) (FIB1)
Arabidopsis_thaliana
U60.2F
C/D
25S rRNA
Intronic
FIBRILLARIN 2
Arabidopsis_thaliana
U61
C/D
18S rRNA
Poly
Poly:U61
Arabidopsis_thaliana
U61-2
C/D
25S rRNA,18S rRNA
Poly
Poly:U61-2
Arabidopsis_thaliana
U80-1
C/D
25S rRNA
Poly
poly:SnoR32-1
Arabidopsis_thaliana
U80-2
C/D
25S rRNA
Poly
poly:SnoR32-2
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