Family: SNORD99

CLUSTAL W (1.83) multiple sequence alignment C_familiaris300439 ---AATGAGTGATGACAAAATGTTTCGGTCCCAAATGATACATAT-TGATTAT---ACCG C_familiaris300440 ---AATAGATGATGACAAAATGTTTCGGTCCCAGATGACAACCAC-TGATAAA---ACT- C_porcellus300365 ---TATAAGTGATGAAAAAATGTTTTGGTCCCAGTTGATGTCCAC-TGATA-----ACTG C_porcellus300837 ---AATGAATGATGACAAAATGTTTCGGTCCCAGATGACACAAAC-TGATTAT---ACCG D_novemcinctus300560 ---AATACATGATGAGAAAATGTTTCGGTCCCAGCTGATGTACAC-TGATA-----ACT- E_telfairi300031 ---AATGAAGGATGACAAAATGTTTCGGTCCCAAATGAT--------------------- M_musculus300816 ---------TGATGACAT-TC-TCCGGAATCGCTGTACTGAC--T-TGATGAAAGTACTT T_nigroviridis300042 ---------TGATGACAAATC-TCCGGAATCTCTGTACTTGCCTT-TGATGAAA---CCC T_nigroviridis300043 ---------TGATGACAAATC-TCCGGAATCTCTGTATTGAC--T-TGATGAA----TAC E_telfairi300763 ----TGCAATGATGGCGTAAT-TTGCGTCTGACTCT-GTTCTCAG-CGACAGT-TGCCTG E_telfairi300855 ----TGCAATGATGGCGTAAT-TTGCGTCTGACTCT-GTTCTCAG-CGACAGT-TGCCTG E_telfairi300857 ----TGCAATGATGTCGTAAT-TTGCGTCTGACTCT-GTTCTCAG-CGACAGT-TGCCTG E_caballus300362 ----TGCAATGATGTCGTAAT-TTGCGTCTTACTCT-GTTCTCAG-CGACAGT-TGCCTG E_europaeus300698 ----TGCCATGATGTCATAAT-TTGCTCCTTACTCT-GCTCTCGG-CGACAGT-TGCCTG F_catus300147 ----TGCAATGATGTCGTAAT-TTGCGTCTTACTCT-GTTCTCGG-CGACAGT-TGCCTG F_catus300186 ----TGCAATGATGTCGTAAT-TTGCGTCTTACTCT-GTTCTCGG-CGACAGT-TGCCTG G_gallus300041 ----TGCCATGATGTCGTAAT-TTGCGTCTTACTCT-GTGCTCAG-TGACAGT-TGCCTG G_gallus300043 ----TGCTGTGATGATGTAAT-TTGCGTCTTATCCA-GTGTTCAG-CGACAGT-TGCCTG G_aculeatus300109 ----TGCCATGATGGTGTAAT-TTGCGTCTGAGTCG-GTGATCAG-TGACAGT-GGCCTG G_aculeatus300110 ----TGCAATGATGGTGTAAT-TTGCGACTTACTCT-GTGATCAG-TGACAGA-TGCCTA G_gorilla300201 ----TGCAATGATGTCGTAAT-TTGCGTCTTACTCT-GTTCTCAG-CGACAGT-TGCCTG H_sapiens300523 ---TTGCAATGATGTCGTAAT-TTGCGTCTTACTCT-GTTCTCAG-CGACAGT-TGCCTG L_africana300151 ----TGCAATGATGTCGTAAT-TTGCGTCTTACGCT-GTTCTCAG-TGACAGA-TGCCTG L_africana300473 ----TGCAATGATGTCGTAAT-TTGCGTCTTACTCT-GTTCTAAG-CGACAGT-TGCCTG M_mulatta300553 ----TGCAATGATGTCGTAAT-TTGCGTCTTACTCT-GTTCTCAG-CGACAGT-TGCCTG M_murinus300544 ----TGCAATGATGTCGTAAT-TTGCGTCTTACTCT-GTTCTCAG-CGACAGT-TGCCTG M_murinus300289 ----TGCAATGATGTTGTAAT-TTGTGTCTTGCTCT-GTTCTCAG-CAACAGT-TGCCTG M_domestica300114 ----TGCTATGATGTCGTAAT-TTGCGTCTTACCTA-GCGTTCAG-TGACAGT-TGCCTG M_domestica300112 ----TGCTGTGATGCTGTAAT-TTGCGCCTTACTCT-GTTCTCAG-TGACAGT-TGCCTG M_musculus300891 ----TGCAGTGATGTCGTAAT-TTGCGTCTTACTCT-GTTCACAG-CGACAGT-TGCCTG M_musculus300893 ----TGCAATGATGTTGTAAT-TTGCGTCTTACTCT-GTTTTCAG-TGACAGT-TGCCTG M_lucifugus300765 ----TGCAATGATGTTGTAAT-TTGCGTCCTACTCT-GTTCTCAG-CGACAGT-TGCCTG M_lucifugus300992 ----TGCAATGATGTCGTAAT-TTGCGTCCTACTCT-GTTCTCAG-CGACAGT-TGCCTG O_anatinus303113 ----TGCCATGATGTCGTAAT-TTGCGTCTTACTCT-GTTCTCAG-TGACAGT-TGCCTG O_anatinus303115 ----TGCTATGATGCTGTAAT-TTGCGTCTTATCCAAGCGTTCGG-CGGCAGT-TGCCTG O_cuniculus300008 ----TGCTGTGATGTCGTAAT-TTGCGTCTTACTCT-GTTCTCAG-CGACAGT-TGCCTG O_cuniculus300433 ----TGCCGTGATGTCGTAAT-TTGCGTCTTACTCT-GTTCTCAG-CGACAGT-TGCCTG O_latipes300068 ----TGCTATGATGGTGTAAT-TTGCGTCTGACTCT-GTGACCAG-TGACAGAATGCCTA O_garnettii300729 ----TGCAATGATGTCGTAAT-TTGCGTCTTACTCT-GTTCACAG-CGACAGT-TGCCTG P_troglodytes300704 ----TGCAATGATGTCGTAAT-TTGCGTCTTACTCT-GTTCTCAG-CGACAGT-TGCCTG P_pygmaeus300688 ----TGCAATGATGTCGTAAT-TTGCGTCTTACTCT-GTTCTCAG-CGACAGT-TGCCTG R_norvegicus300872 ----TGCAGTGATGTCGTAAT-TTGCGTCTTACTCT-GTTCACAG-CGACAGT-TGCCTG R_norvegicus300874 ----TGCAGTGATGTTGTAAT-TTGCGTCTTACTCT-GTTTTCAG-TGACAGT-TGCCTG S_cerevisiae300056 GTAACTGAATGATGATATAAT-TTGCGATCTAGG--GCTAATCAC-TTGGAAC---ACCG T_nigroviridis300082 ----TGCCATGATGGTGTAAT-TTGCGTCTGATCCT-GTGAACGC-TGACAGT-TGCCTG T_nigroviridis300083 ----TGCACTGATGGTGTAAT-TTGCGTCTGACTCT-GTGACCGG-TGACAGT-TGCCTG T_belangeri300416 ----TGCAATGATGTCGTAAT-TTGCGTCGTACTCT-GTTCTCAG-CGACGGT-TGCCTG X_tropicalis300026 ----TGCAATGATGGTGTAAT-TTGCGTCTTACCTG-GTATTCAG-CGACAGT-TGCCTG X_tropicalis300125 ----TGCTATGATGTCGTAAT-TTGCGTCTTACTCC-ACATCATG-CGACAGT-TGCCTG C_intestinalis300009 ---CTGCTATGATGATGTATT-CCAACATTCGCAGTTTCCACCAGACCGAGATAAACTTA **** C_familiaris300439 CTACATTTACTTCTGACATT---------------------------------------- C_familiaris300440 TAACATTT--TTCTGATGTT---------------------------------------- C_porcellus300365 TTACATTT--TTCTGATGTT---------------------------------------- C_porcellus300837 TTACATTTATTTCTGACATT---------------------------------------- D_novemcinctus300560 TAACATTT--TTCTGATGTT---------------------------------------- E_telfairi300031 ------------------------------------------------------------ M_musculus300816 TTGAACCCTTTTCCATCTGATGACACCGAGTTTTCTC----------------------- T_nigroviridis300042 CTGAACCCTTT------TGCTGATGGCTGCTTTTAAATGTAGAC---------------- T_nigroviridis300043 TTGAACCCATTA--ATCTGATACTGGCTGCATCGAT------------------------ E_telfairi300763 CTGT-CACTAGGCTGGTAC-AGAAGGTTGACGGAAAT---TCTTACTGAGCA-------- E_telfairi300855 CTGT-CACTAGGCTGGTAC-AGAAGGTTGACGGAAAT---TCTTACTGAGCA-------- E_telfairi300857 CTGT-CACTAGGCTGGTAC-AGAGGGTTGACGAAAAT---TCTTACTGAGCA-------- E_caballus300362 CTGT-CAGTAAGCTGGTTC-AGAAGGGTGACGAAAAT---TCTTACTGAGCA-------- E_europaeus300698 CTGT-CAGTGAGCTGGTGC-AAAAGGGTGACTAATGT---TCTCACTGAGCA-------- F_catus300147 CTGT-CAGTAAGCTGGTTC-AGAAGGGTGACGAAAAT---TCTTACTGAGCA-------- F_catus300186 CTGT-CAGTAAGCTGGTTC-AGAAGGGTGACGAAAAT---TCTTACTGAGCA-------- G_gallus300041 CTGT-CAGTGAACTGGTAC-AGATGGTTGACGAACAGT--TAATGCTGAGCA-------- G_gallus300043 CTGT-TACCATGTTGGCACTGTTGAGCTG-CAGACACATTTAATTCTGAGCA-------- G_aculeatus300109 CTGT-CTTAAAGCTGTCAC-ATGGTATTGATGTGTCTT--CGAGTCTGAGCA-------- G_aculeatus300110 CTGT-CAT-ATGCTGGCAC-AGATGGCTGACGAACAAT---GAGTCTGAGCA-------- G_gorilla300201 CTGT-CATTAAGCTGGTAC-AGAAGGTTGACGAAAAT---TCTTACTGAGCA-------- H_sapiens300523 CTGT-CAGTAAGCTGGTAC-AGAAGGTTGACGAAAAT---TCTTACTGAGCAA------- L_africana300151 CTGT-CATTAAGCTGGTAC-AGAAGGTTGACGAAAAT---TTCTACTGAGCA-------- L_africana300473 CTGT-CATTAAGCTGGTAC-AGAATGTTGACGAAAAT---TCTTACTGAGCA-------- M_mulatta300553 CTGT-CAGTAAGCTGGTAC-AGAAGGTTGACGAAAAT---TTTTACTGAGCA-------- M_murinus300544 CTGT-CAGTAAGCTGGTAC-AGAAGGTTGACGAAAAT---TTTTACTGAGCA-------- M_murinus300289 CTAT-AA-------------AGAAGGTTGACAAAAAT---TCTTACTGAGCA-------- M_domestica300114 CTGT-CAGTAAACTGGCGCTTTCTGGGTGAAGACTACT--TGTAACTGAGCA-------- M_domestica300112 CTGT-CAATAAGCTGGTAC-AGAAGGTTGCTGAAAATG--TTTTTCTGAGCA-------- M_musculus300891 CTGT-CAGTATGCTGGTTC-AGAAGGTTGACGAACAT---TGTTACTGAGCA-------- M_musculus300893 CTGT-CAGTAAGCTGAATC-AGAAGGTTGACGAAAAT---TATTGCTGAGCA-------- M_lucifugus300765 CTGT-CAGTCAGCTGGTTC-AGAAGGGTGACGAAAAT---TCTTACTGAGCA-------- M_lucifugus300992 CTGT-CAGTCAGCTGGTTC-AGAAGGGTGACGAAAAT---TCTTACTGAGCA-------- O_anatinus303113 CTGT-CAAGAAGCTGGTAC-AGAAGGTTGACGAAAAGAAATCTCACTGAGCT-------- O_anatinus303115 CTGC-CAGAAAGCTGGCGCTCTTTGGATGACGATTACT--CGTGACTGAGCA-------- O_cuniculus300008 CTGT-CAGCGCGCTGGTTC-AGAAGGTTGACGAAACT---GCTAACTGAGCA-------- O_cuniculus300433 CTGT-CAGTGTGCTGGTTC-AGAAGGTTGACGAAAAT---GCTAACTGAGCA-------- O_latipes300068 CCGT-CTT-ATACTGGCGC-AGATGGCTGGTG-ATCAT--TGAGTCTGAGCA-------- O_garnettii300729 CTGT-CAGTAAGCTGGTAC-AGAAGGTTGACGAAAAT---TCTTACTGAGCA-------- P_troglodytes300704 CTGT-CAGTAAGCTGGTAC-AGAAGGTTGACGAAAAT---TCTTACTGAGCA-------- P_pygmaeus300688 CTGT-CAGTAAGCTGGTAC-AGAAGGTTGACGAAAAT---TCTTACTGAGCA-------- R_norvegicus300872 CTGT-CAGTAAGCTGGTTC-AGAAGGTTGACGAATGT---TGTTGCTGAGCA-------- R_norvegicus300874 CTGT-CAGAAAGCTGAATC-AGAAGGTTGACGAAAAT---TATTGCTGAGCA-------- S_cerevisiae300056 CCATGTTCTATATGGGTGATTAGCGAAGTGCGAAAAATTTTTTATCTGATATTTTC---- T_nigroviridis300082 CTGT-CTCTATGCTGTCAT-AGGTAGTTGATGTATGCT--AAGGTCTGAGCA-------- T_nigroviridis300083 CTGT-CAATATGCTGGCAC-ATACGACTGACGAGCAAC--AGTGTCTGAGCA-------- T_belangeri300416 CTGT-CAGTAAGCTGGTAC-AGAAGGTTGACGAAAAT---TCTTACTGAGCA-------- X_tropicalis300026 CTGT-CATAAAGCTGGTGC-CAAGGGGTGACGATAATA--CAAGTCTGAGCA-------- X_tropicalis300125 CTGT-CATTAAGCTGGTGT-GGGTGACTGACGAATATC--GCGTTCTGAGCA-------- C_intestinalis300009 ATATACAGGAAGGTAAAAC-TTGCTGTATATTAAGCTAACTCTCATTAATGATGGTTTAA C_familiaris300439 -------------------------- C_familiaris300440 -------------------------- C_porcellus300365 -------------------------- C_porcellus300837 -------------------------- D_novemcinctus300560 -------------------------- E_telfairi300031 -------------------------- M_musculus300816 -------------------------- T_nigroviridis300042 -------------------------- T_nigroviridis300043 -------------------------- E_telfairi300763 -------------------------- E_telfairi300855 -------------------------- E_telfairi300857 -------------------------- E_caballus300362 -------------------------- E_europaeus300698 -------------------------- F_catus300147 -------------------------- F_catus300186 -------------------------- G_gallus300041 -------------------------- G_gallus300043 -------------------------- G_aculeatus300109 -------------------------- G_aculeatus300110 -------------------------- G_gorilla300201 -------------------------- H_sapiens300523 -------------------------- L_africana300151 -------------------------- L_africana300473 -------------------------- M_mulatta300553 -------------------------- M_murinus300544 -------------------------- M_murinus300289 -------------------------- M_domestica300114 -------------------------- M_domestica300112 -------------------------- M_musculus300891 -------------------------- M_musculus300893 -------------------------- M_lucifugus300765 -------------------------- M_lucifugus300992 -------------------------- O_anatinus303113 -------------------------- O_anatinus303115 -------------------------- O_cuniculus300008 -------------------------- O_cuniculus300433 -------------------------- O_latipes300068 -------------------------- O_garnettii300729 -------------------------- P_troglodytes300704 -------------------------- P_pygmaeus300688 -------------------------- R_norvegicus300872 -------------------------- R_norvegicus300874 -------------------------- S_cerevisiae300056 -------------------------- T_nigroviridis300082 -------------------------- T_nigroviridis300083 -------------------------- T_belangeri300416 -------------------------- X_tropicalis300026 -------------------------- X_tropicalis300125 -------------------------- C_intestinalis300009 CGTTCCTTCCTTGGATGTCTGAGCAG