snOPY snoRNA Orthological Gene Database

Family: SNORD50

CLUSTAL W (1.83) multiple sequence alignment C_familiaris300064 ----AATCTATGATGAT-CTTATCCCGAACCTGAATAC--ATGTTGAGA--AAAC---CA C_familiaris300065 ----AATCAATGATGAAACCTATCCCGAAGCTGACCAC--CTGAAGAAA---AGCATA-- C_porcellus300722 ----AATCAGTGATGAAACCTATCCCGAAGCTGATTAC--CTGAAGAAA---AACATG-- C_porcellus300723 ----TATCTATGATGAT-CCTATCCCGAACCTGAATTT--CTGTTGAAAAAACA-----T D_novemcinctus300359 ----TATCTGTGATGAT-CCTATCCCGAACCTGAATTT--CTGTTGAAA--AAAGTTA-- D_novemcinctus300360 ----GCTCAATGATGTAAC-TATCCCGAAACTGAACAC--CTGAAGAAA---ACAAG--- D_melanogaster300193 ACCAATATGATGATAACCTTTATCCCGAATTTGAAGCC---AAATGAGA-CTAATTTTTT E_telfairi300777 ----TATCTATGATGAT-CCTATCCCAAACCTGAACAAA-CTGTTGAAAAAAAGTTTA-- E_caballus300099 ----ACACCAGGATGAT-CCTATCCCAAAACTGAATTT--CTGTTG-AA-AAAACTTA-- E_caballus300100 ----TATCGATGATGAT-CCTATCCCGAACCTGAATTT--CTGTTGAAA--AAACTTA-- E_caballus300101 ----AATTCATGATGAAACCTATCCCGAAGCTGATTAC--CTGAAGAAA---AGCATG-- E_europaeus300377 ----TATCTATGATGAT-CTTATCCCGAACCTGAATTT--CTGTTGAGA--AAA-----C E_europaeus300378 ----GATCGATGATGAGGCTTACCCCGAAGCTGATATC--CTGAAGAAA---AGAAAG-- F_catus300222 ----AATCCATGATGAT-CTTATCCCGAACCTGAATAT--CTGTTGAGA--AAAC---TT F_catus300223 ----TATCAATGATGAAATCTATCCCGAAGCTGACCAC--CTGAAGAAA---AACATA-- G_gallus300002 ----CATCTATGATGAT-CCTATCCCGAACCTGAATTCT-TTGCTGAAA---AACCTA-- H_sapiens300532 ----TATCTGTGATGAT-CTTATCCCGAACCTGAACTT--CTGTTGAAAAAAAAAAACTT H_sapiens300533 ----AATCAATGATGAAACCTATCCCGAAGCTGATAAC--CTGAAGAAA---AATAAG-- L_africana300403 ----TATCTATGATGAT-CCTATCCCGAAACTGAATTT--CTGTTG-AA-AAAACTTA-- M_mulatta300125 ----TATCTGTGATGAT-CTTATCCCGAACCTGAACTT--CTGTTGAAAAAAAAAA--TT M_mulatta300126 ----AATCAATGATGAAACCTATCCCGAAGCTGATAAC--CTGAAGAAA---AATAAA-- M_mulatta300479 ----CATCTGTGATTAT-CCTATTTCGAATCTGAATTT--CTACTAGAAGAAAACTTG-- M_mulatta300628 ----AATCAATGATGAAACCTATCCCAAAGCTGATGAC--CTGAAGAAA---AATACC-- M_domestica300089 ----TATTAATGATGAT-TCTATCCCGAACCTGAATTC--CTGTTGAAA---AACTACAT M_domestica300090 ----ACTCAATGATGAA-CCTATCCCGAACCTGATTTC--ATGATGAAA---AAACTTAA M_musculus300110 ----AGTCTATGATGAT-CCTATCCCGAACCTGAATTC--CTGTTGAAA---AACCATAA M_musculus300509 ----AGTCTATGATGAT-CCTATCCCGAACCTGAATTC--CTGTTGAAA---GACCATAC M_musculus300705 ----AGTCTATGATGAT-CCTATCCCGAACCTGAATTC--CTGTTGAAA---AACCATAC M_musculus300895 ----AGTCTATGATGAT-CCTATCCCGAACCTGAATTC--CTGTTGAAA---AACCATAC M_musculus300896 ----AGTCTATGATGAT-CCTATCCCGAACCTGAATTC--CTGTTGAAA---AACCATAA M_lucifugus300426 ----------AGTTAACACCCAGACCGAACCTGAATTT--CTGTTG-AA-AAAACTTAA- M_lucifugus300453 ----TATCTGTGATGAT-CCTATCCCGAACCTGAATTT--CTGTTGAAA-AAACTTAA-- M_lucifugus300454 ----AATCAATGATGAAACCTATCCCGAAGCTGATTGC--CTGAAGAAA---AGCATA-- M_lucifugus300467 ----TATCTATGATTAT-TCTATCCTGAACCTGAATTT--CTGTTGCAA-AAAACTTAAT M_lucifugus300581 ----TATCTATTATGAT-CCTATTCCTAACCTGAATTT--CTGTTG-AA-AAATGTTAA- M_lucifugus300970 ----TATCTATGATGAT-CCTATCCCAAACCTGAATTT--CTGTTG-AA-AAAACTTAA- O_anatinus304455 ----AATCAGTGATGAG-CATATCCCGAACCTGACTTC--TTGATGAAA---ACACTATT O_anatinus304456 ----TGTCTGTGATGAT-TCTATCCCGAACCTGAACTC--CTGTTGAAAAAAAACA---C O_cuniculus300004 ----TATCTATGATGAT-CTTATCCCGAACCTGAATTTTTCTGTTGAAA--AAAAACGCT P_troglodytes300490 ----TATCTGTGATGAT-CTTATCCCGAACCTGAACTT--CTGTTGAAAAAAAAAC--TT P_troglodytes300491 ----AATCAATGATGAAACCTATCCCGAAGCTGATAAC--CTGAAGAAA---AATAAG-- P_troglodytes300653 ----AATCAATGATGAAACCTATCCCAAAGCTGATGAC--CTGAAGAAA---AATACG-- P_pygmaeus300303 ----TATCTGTGATGAT-CTTATCCCGAACCTGAACTT--CTGTTGAAAAAAAAAC--TT P_pygmaeus300304 ----AATCAATGATGAAACCTATCCCGAAGCTGATAAC--CTGAAGAAA---AATAAG-- P_pygmaeus300559 ----CATCTGTGATTAT-CCTATTTCAAACCTGAATTT--CTACTAGAA-AAAACTTA-- P_pygmaeus300653 ----AATCAATGATGAAACCTATCCCAAAGCTGATGAC--CTGAAGAAA---AATACG-- R_norvegicus300630 ----AATTAATGATGAT-CCTATCCTGAATCTGAATTC--CTGTTGGAA---AACCATAA R_norvegicus300778 ----GATCTATGATGAT-CCTATCCCGAATCTGAATTC--CTGTTGAAA---AACTGTAG R_norvegicus300798 ----GATCTATGATGAT-CCTATCCCGAATCTGAATTC--CTGTTGAAA---AAATATAA S_araneus300658 ----GATCAATGATGAAACCTATCCCGAAACTGATCAC--CTGAAGAAA---AAAACATG T_belangeri300106 ----TACCTATGATGAT-CCTATCCCGAACCTGAATTT--CTGTTG-AA-AAAAATAAAA T_belangeri300107 ----AATAAATGATGAAACCTATCCCGAAACTGAATAC--CTGAAGAAA---AACCTG-- * * ** *** * C_familiaris300064 ATACGGATCTGGCTTCTGAGAT C_familiaris300065 -TACGGATTCGGCTTCTGAGAT C_porcellus300722 -CACGGATTCGGCTTCTGAGAT C_porcellus300723 TTACGGATCTGGCTTCTGAGAT D_novemcinctus300359 -TACGGATCTGGCTTCTGAGAT D_novemcinctus300360 -TACGGATTCGGCTTCTGAGAT D_melanogaster300193 ATACTGATCGA----------- E_telfairi300777 -TATGGATCTGGCTTCTGAGTT E_caballus300099 -TACGGATCTGGCTTCTGAGAC E_caballus300100 -TACGGATCTGGCTTCTGAGAT E_caballus300101 -TGCGGATTCGGCTTCTGAGAT E_europaeus300377 GTACGGATCTGGCTTCTGAGAT E_europaeus300378 TTACGGATTCGGCTTCTGAGAT F_catus300222 ATACGGATCTGGCTTCTGAGAT F_catus300223 ---CGGATTCGGCTTCTGAGAT G_gallus300002 CTACGGATCCGGCATCTGAGAT H_sapiens300532 TTACGGATCTGGCTTCTGAGAT H_sapiens300533 -TACGGATTCGGCTTCTGAGAT L_africana300403 -TACGGATCTGGCTTCTGAGAT M_mulatta300125 TTACGGATCTGGCTTCTGAGAT M_mulatta300126 -TACGGATTCGGCTTCTGAGAT M_mulatta300479 -TATGATTCTGGCTTCTGAGAT M_mulatta300628 -TACAGATTCAGCTTCTGATAT M_domestica300089 ATACGGATCTGGCTTCTGAGAT M_domestica300090 ATACGGATCTGGCTTCTGAGAA M_musculus300110 TTACGGATCTGGCTTCTGAGAT M_musculus300509 TTACGGATCTGGCTTCTGAGAT M_musculus300705 TTACGGATCTGGCTTCTGAGAT M_musculus300895 TTACGGATCTGGCTTCTGAGAT M_musculus300896 TTACGGATCTGGCTTCTGAGAT M_lucifugus300426 -TACAGATCTGGCTTCTGAGAT M_lucifugus300453 -TACGGATCTGGCTTCTGAGAT M_lucifugus300454 -TACGGATTCGGCTTCTGAAAT M_lucifugus300467 ATACGGATCTAGCTTCTGAGAT M_lucifugus300581 -TACAGATCTGGTTTCTGAGAT M_lucifugus300970 -TACAGATCTCATTTTGGAGAT O_anatinus304455 ATACGGATCTGGCATCTGAGAA O_anatinus304456 AAACGGATCTGGCTTCTGAGAT O_cuniculus300004 ATACGGATCTGGCTTCTGAGAT P_troglodytes300490 TTACGGATCTGGCTTCTGAGAT P_troglodytes300491 -TACGGATTCGGCTTCTGAGAT P_troglodytes300653 -TACAGATTCAGCTTCTGAGAT P_pygmaeus300303 TTACGGATCTGGCTTCTGAGAT P_pygmaeus300304 -TACGGATTCGGCTTCTGAGAT P_pygmaeus300559 -TATGAATCTGGCTTCTGAGAT P_pygmaeus300653 -TACAGATTCAGCTTCTGAGAT R_norvegicus300630 TTACGGATCTGGCCTCTGAGAT R_norvegicus300778 TTACAGATCTGGCTTCTGAGAT R_norvegicus300798 TTACGGATCTGGCTTCTGAGAT S_araneus300658 TTACGGATTCGGCTTCTGAGAT T_belangeri300106 -TACGGATCTGGCTTCTGAGAT T_belangeri300107 -TACGGATTCGGCTTCTGAAAT *

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