snOPY snoRNA Orthological Gene Database

Family: SNORD48

CLUSTAL W (1.83) multiple sequence alignment C_familiaris300224 ---AGTGATGATGAACCCCGGTGACTCT-G--AGTGTCT-CGCTGACGCC E_telfairi300234 ---GGTGGTGATGACCCCCGGTGATTCT-G--AGTGTCTTTGCTGATGCC E_telfairi300344 ---GAGGATGATGACCCCAGGTGATTCT-G--AGTGTCTTTGCTGATGC- E_telfairi300685 --CGAGGATGATGACCCCAGGTGATTCT-G--AGTGACTTTGCTGACGC- E_caballus300005 ---GACAATGATGACTCCAGGTGACTCT-G--AGTGTGT-CGTTGACGAC E_europaeus300568 ---GATGATGACGACCCCAGGTGAATCT-G--AGTGTTT-CGCTGACGCC F_catus300069 ---GGTAATGATGAACCCAGGTGATTCT-G--AGTGTCT-CGCTGACGCC H_sapiens300528 ---AGTGATGATGACCCCAGGTAACTCTTG--AGTGTGT-CGCTGATGCC L_africana300453 ----TGATTGATGACCCCAGGTGATTCT-G--AGTGTCT-CGCTGACGCC M_mulatta300239 ---AGTGATGATGACCCCAGGTGACTCT-G--AGTGTGT-CGCTGACGCC M_murinus300260 ---GGTGATGATGACCCCAGGTGATTGAGATTGGTATCTC-ACTGATGCC M_murinus300519 ---GGTGATGACGACTTCAGGTGA--CT-G--AGTGTCT-CGCTGATGCC M_domestica300054 AGGCATGATGACCTCAGTGGAT----CT-G--AGTATCT-CGTTGATGCT M_musculus300616 ---AGTAATGATGATTTCTGGTGATTCT-G--AGTGTCT-CGCTGACGCC M_lucifugus300661 ----GGGATGATGACCCCAGGTGACTCT-G--AGTGTCTCT-CTGACGCC O_cuniculus300042 ---GGTGAAGATAACTTTAGGTGGCTCTGA---GTGTCTC-ACTGACACC O_cuniculus300407 ---GTTGATGATGACCCCAGGTGACTCT-G--AGTGTCT-CGCTGACGCC O_garnettii300624 GGGCATGATGACCACCCCGGGTGA--CT-G--AGTGTCT-CGCTGATGCC P_troglodytes300487 ---AGTGATGATGACCCTAGGTAACTCT-G--AGTGTGT-CGCTGATGCC P_pygmaeus300702 ---AGTGATGATGACCCCCGGTGACTCT-G--AGTGTGT-CGCTGATGCC R_norvegicus300414 ---GGTAATGATGACTTCTGGTGATTCT-G--AGTGTCTTCGCTGACGCC S_araneus300713 ---GGTGATGATGAGCCCTGGTGATTCTTG--AGTGTCTT-GCTGAGGCC S_araneus300943 ---GGTGATGATGA-CCCAGGTGACTCT-G--AGTGTCT-CGCTGACGCC S_tridecemlineatus300252 ---GGTAATGATGACTCCAGGTGATTCT-G--AGCGTGT-CGCTGATGCC T_belangeri300405 ---GCTGATGATGACCCCAGGTGATTCT-G--AGTGTCT-CGCTGACGCC ** * * * * *** C_familiaris300224 A-TCACCGCAGCGCGCTGACC E_telfairi300234 AT-CAC-GCAGCACTCTGACA E_telfairi300344 A-TCACCGCAGCACGCTGAC- E_telfairi300685 A-TCACCGCAGCGCGCTGACG E_caballus300005 A-TCACCGCAGCGCGCTGACC E_europaeus300568 ATTCACCGCAGCGCGCTGACT F_catus300069 G-TCACCGCAGCGCGCTGACC H_sapiens300528 A-TCACCGCAGCGCTCTGACC L_africana300453 A-TCACCGCAGCGCGCTGACA M_mulatta300239 A-TCACCGCAGCGCTCTGACC M_murinus300260 AAGCGCTGCAGCATGCTGACC M_murinus300519 AACCACCGCAGCGCGCTGACC M_domestica300054 A-CCACCGCAGCGCGCTGACT M_musculus300616 A-TCACCGCAGCGCGCTGACC M_lucifugus300661 A-TCACCGCAGCGCGCTGACC O_cuniculus300042 AT-CACTGCAGCATGCTGACC O_cuniculus300407 A-GCACCGCAGCGCGCTGAC- O_garnettii300624 AATCACCGCAGCGCGCTGACC P_troglodytes300487 A-TCACCGCAGCGCTCTGACC P_pygmaeus300702 A-TCACCGCAGCGCTCTGACC R_norvegicus300414 A-TCACCGCAGCGCGCTGACC S_araneus300713 AT-CACTGCAGTA-TCTGATC S_araneus300943 A-TCACCGCAGCGCGCTGACC S_tridecemlineatus300252 A-TCACCGCAGCGCGCTGACA T_belangeri300405 A-TCACCGCAGCGCGCTGACC * * **** ****

Copyright © 2008 RI Laboratory, Frontier Science Research Center, University of Miyazaki, All rights reserved