snOPY snoRNA Orthological Gene Database

Family: SNORD43

CLUSTAL W (1.83) multiple sequence alignment A_thaliana300173 -AACAAT-GATGAGATATTAGCAGACGGGCGGTCTGAA-TTGATG----- A_thaliana300174 -AACAAT-GATGAGATACTTGCAGACGGGCGGTCTGAAATTGATG----- C_familiaris300086 CACAGAT-GATGAACT---TTCTGACGGGCGGACAGATCCTCT------- C_porcellus300832 CACAAAT-GATGAACT---TATTGACGGGCGGACAGAGACTGT------- E_telfairi300865 CACAAGT-GATGAGCC---TATTGACGGGCGGACAGAGGA------CTCT E_caballus300020 CGCAGGT-GATGAGCT---TATTGACGGGCGGACAGAGA-CTC------- E_europaeus300674 CACAGAT-GATGAACAA--TTTTGACGGGCGGACAGAGACTCC------- F_catus300233 CACAGAT-GATGAACT---TATTGACGGGCGGACAGAGACTCT------- G_gorilla301052 -ACAGAT-GATGAACT---CATTGACAGGCATACAGAGACTGT------- G_gorilla300373 CACAGAT-GATGAACT---TATTGACGGGCGGACAGAAACTGT------- G_gorilla300486 AACAGAT-GATGAAAT---TATTGATGGGTGGACAAAAACTGC------- H_sapiens300686 CACAGAT-GATGAACT---TATTGACGGGCGGACAGAAACTGT------- L_africana300493 CACAGAT-GATGAGCC---TATTGACGGGCGGACAGAGAACGC------- M_mulatta300205 -ACAGAT-GATGAACT---TATTGATGGGTGGACAGAGATAGT------- M_mulatta300241 AATGGAT-GATGAAAT---TATTGATGGGTGGATAAAAACTGT------- M_mulatta300256 CACAGAT-GATGAACT---TATTGACGGGCGGACAGAAACTGT------- M_mulatta300653 AACAGAT-GATGAACT---CATTGACAGGCATGCAGAGACTGT------- M_murinus300212 -ACAGGT-GATGAACT---TATTGATGGGTAGACAGAGACACT------- M_murinus300569 CACAGGT-GATGAACT---TACTGACGGGCGGACAGAGACACT------- M_domestica300019 TACACGT-GATGAAAT---CTATGACGGGCGGACAGAGAAAACA------ M_musculus300858 CACAAAT-GATGAACC---TTTTGACGGGCGGACAGAAA-------CTCT M_lucifugus300141 CACAGAT-GATGAACT---TGTTGACGGGCGGACAGAGACTCT------- O_anatinus303675 TACAAGT-GATGAGAC---CCTTGACGGGCGGACATAGGAAACCGCCTCT O_garnettii300550 CACAGGT-GATGAACT---CATTGACGGGCGGACAGAGACGCT------- O_garnettii300181 -TCAAACAGATGAACT---CATTGATGGGCAGACAGAGAC--T------- O_garnettii300350 AACAGGT-GATGAACT---CATTGATGGGTGGACAGAGGC--T------- O_garnettii300117 AACAGAT-GATGAACT---CATTGATGGGCAGACATAGGC--T------- P_troglodytes300619 CACAGAT-GATGAACT---TATTGACGGGCGGACAGAAACTGT------- P_troglodytes300665 -ACAGAT-GATGAACT---CATTGACAGGCATACAGAGACTGT------- P_pygmaeus300148 CACAGAT-GATGAACT---TATTGACGGGCGGACAGAAACTGT------- P_pygmaeus300314 AACGGAT-GATGAAAT---TATTGATGGGTGGACAAAAACTGC------- P_pygmaeus300418 CACAGAT-GATGAACT---TATTGACGGGCGGACAGAAACTGT------- P_pygmaeus300737 -ACAGAT-GACGAACT---CATTGACAGGCATACAGAGACTGT------- R_norvegicus300512 CACAAAT-GATGAACC---CTTTGATGGGTGGGCAGAAACA--------- R_norvegicus300574 CACAAAT-GATGAATC---CTTTGACGGGCGGGCAGAATCTCT------- S_tridecemlineatus300064 CTCACAT-GATGAACT---TATTGACGGGCGGACAGAATCTGT------- T_belangeri300003 CACACAT-GATGAAGT---TGTTGATGGGTGGACAGAGACTAT------- T_belangeri300027 AGAAGAT-GATAAACT---TACTATTGGGTGAACAGAAACTGT------- T_belangeri300246 CACACAT-GATGAAGT---TGTTGATGGGTGGACAGAGACTAT------- T_belangeri300348 AGAAGAT-GATAAACT---TACTATTGGGTGAACAGAAACTGT------- T_belangeri300425 CACATGT-GATGAACT---TATTGACGGGCGGACAGAGACTGT------- ** * ** * A_thaliana300173 ------CCGTGTAGATTGTCTGCCATCGCTACTATGTAGCTTCTCTGAGT A_thaliana300174 ------TCGTGTTGATTGTCTGCCATAAGCTACATAAGCATTCTCTGAGT C_familiaris300086 --------GTGCTGAT----TGTCA-CGTTCTGATTTG------------ C_porcellus300832 --------GTGCTGAT----TGTCA-AGTTCTGATTTG------------ E_telfairi300865 G--------TGCTGAT----TGTCA-ATATTCTGATCTG----------- E_caballus300020 -------TGTGCTGAT----TGTCA-CGTTCTGATGTG------------ E_europaeus300674 --------GTGTTGAT----TGTCA-AGTTCTGACCTG------------ F_catus300233 --------GTGCTGAT----TGTCA-TGTTCTGATTTG------------ G_gorilla301052 --------GTGCTGAT----TGTCA-TGTTCTGACTTA------------ G_gorilla300373 --------GTGCTGAT----TGTCA-TATTCTGATTTG------------ G_gorilla300486 --------TGATTGTCA---TGTCA-TGTTCTGATTT------------- H_sapiens300686 --------GTGCTGAT----TGTCA-CGTTCTGATT-------------- L_africana300493 -------TGTGCTGAT----TGTCAATGTTCTGATGGG------------ M_mulatta300205 --------GTGCTAAC----TGTCA-TGTTCTGATTTT------------ M_mulatta300241 --------GTGCTGAT----TGTCA-TGTTCTGATTT------------- M_mulatta300256 --------GTGCTGAT----TGTCA-TGTTCTGATTTG------------ M_mulatta300653 --------GTGCTGAT----TGTCA-TGTTCTGATTT------------- M_murinus300212 --------GTGCTGAT----TGTCA-AGTTCTGACTCA------------ M_murinus300569 --------GTGCTGAT----TGTCA-CGTTCTGATTTG------------ M_domestica300019 -------CGTGCTGAA----CGTCA-TATTCTGATGGT------------ M_musculus300858 G--------TGCTGAA----TGTCA-AGTTCTGATTTG------------ M_lucifugus300141 --------GTGCTGAT----TGTCA-TGTTCTGATTTG------------ O_anatinus303675 GGCGCTTGATGCTGAT----TGTCA-AGTTCTGAATGTA----------- O_garnettii300550 --------GTGCTGAT----CGTCA-TGTTCTGATTTG------------ O_garnettii300181 --------GTGCTGAT----TGTCA-TGTTCTGTTGT------------- O_garnettii300350 --------GTGCTGAT----TGTCA-TGTTCTGATGTG------------ O_garnettii300117 --------GTGCTGAT----TGTCA-TGTTCTGTTGTG------------ P_troglodytes300619 --------GTGCTGAT----TGTCA-CGTTCTGATTTG------------ P_troglodytes300665 --------GTGCTGAT----TGTCA-TGTTCTGACTTA------------ P_pygmaeus300148 --------GTGCTGAT----TGTCA-TGTTCTGATTTG------------ P_pygmaeus300314 --------TGATTGTCA---TGTTC-TGATTT------------------ P_pygmaeus300418 --------GTGCTGAT----TGTCA-TGTTCTGATTTG------------ P_pygmaeus300737 --------GTGCTGAT----TGTCA-TGTTCTGACTTA------------ R_norvegicus300512 ---------TGCTGAT----TGTCA-TGTTCTGATTTG------------ R_norvegicus300574 --------GTGCTGAT----TGTCA-TGTTCTGATCTG------------ S_tridecemlineatus300064 --------GTGCTGAT----TGTCA-TGTTCTGATATG------------ T_belangeri300003 --------GTGCTGTG----TTCTA-ATTTGGGGTGTG------------ T_belangeri300027 --------GTCTTGAT----TGTCA-GGTTCTGATTTG------------ T_belangeri300246 --------GTGCTGTG----TTCTA-ATTTGGGGTGTG------------ T_belangeri300348 --------GTCTTGAT----TGTCA-GGTTCTGATTTG------------ T_belangeri300425 --------GTGCTGAT----TGTCA-AGTTCTGATTTG------------

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