snOPY snoRNA Orthological Gene Database

Family: SNORD29

CLUSTAL W (1.83) multiple sequence alignment A_tauschii300258 ---------GTGCAATGATGATAC--TATTA-CCCAGCTCATTATG-AGA A_thaliana300155 ---------TGGCGATGATGATAACATATTATCCCAGCTCATTATG-AGA C_elegans300114 ---------CCTCGATGACGATTC-----AC-CTA-GCTCACTCAGACAT C_familiaris300105 ---------TTTCCATGATGAGTC-----AAACTA-GCTCACTATGACTT C_familiaris300168 ---------TTTCCATGATGAGTC-----AAACTA-GCTCACTATGACCT C_porcellus300578 ---------TTTCCATGATGAATT-----TAACTA-GCTCACTATGACTA C_porcellus300812 ---------TTTCCATGATGAATT-----TAACTA-GCTCACTATGACTG C_porcellus300839 TATCAGTGATGACACTAAATAGCTC----ACTTTT----AAAAGGATCTT D_rerio300224 ---------TCTCTGTGATGAAGA-----AACTTA-GCTCACTTTGA--- D_novemcinctus300094 ---------TTTCTATGATGAATC-----AAACTA-GCTCACTATGACTT D_melanogaster300155 ---------ACTCAATGATGAAAC---ATTTACCCAGCTCGCTTTGATAT D_melanogaster300157 ---------TTAGTATGATGAAAC---ATTTACCCAGCTCGCTTTGAT-T D_melanogaster300158 ---------TTTGTATGATGAAAC---ATTTACCCAGCTCGCTTTGAT-T D_melanogaster300160 ---------AAAGTATGATGAAAC---ATTTACCCAGCTCGCTTTGATAT E_telfairi300191 ------------CCTTAAAGATGAC----CCCTTT---AAAAAATACCCT E_caballus300030 ---------TTTCTATGATGAAGC-----AAACTA-GCTCACTATGACTT E_caballus300044 --------------ATAATATAAAG----ACTTTTAATAACTTGTTGAAT E_caballus300155 ---------TTTCTATGATGAATC-----AAACTA-GCTCACTATGACTT E_europaeus300048 ---------TTTCTATGATGAATC-----AAACTA-GCTCACTATGAT-T F_catus300172 ---------ATTCTATGATAAATA-----AAACTA-GCTCACTATGACTT H_sapiens300165 ---------TTTCTATGATGAATC-----AAACTA-GCTCACTATGACCG M_mulatta300224 ---------TTTCTATGATGAATC-----AAACTA-GCTCACTATGACTG M_murinus300140 ---------TTAATATGATGAATT-----AAACTA-ACTCACTATGAC-T M_murinus300363 ---------TTTCTGTGATGAATC-----AAACTA-GCTCACTATGATTG M_domestica300068 ---------TTTCAATGATGAGTC-----TAACTA-GCTCACTATGATTT M_musculus300713 ---------TTTCTATGATGAATC-----AAACTA-GCTCACTATGAC-T M_lucifugus300552 ---------TTTCTGTGATGAATC-----GAACTA-GCTCACTATGACGT O_anatinus302953 ---------TTTCTATGATGATTC-----TAACTA-GCTCACTTTGA--T O_cuniculus300023 ---------TTATACTGATGAATCA----A-ACTAAAATTAAGAAATTTT O_cuniculus300181 ---------TTTCTGGGATGAATC-----AAACTA-GCTCACAATGGCTG O_cuniculus300184 ---------TTTCTGGGATGAATC-----AAACTA-GCTCACTATGAC-T O_cuniculus300345 ---------TTTGTGGGATGAATC-----AAACTA-GCTCACTATGAGTG O_garnettii300194 ------CTTCTATATTTAAGAAGCA----ATGGTAAGCACACTATGATTG O_garnettii300248 ---------TTTCTGTGATGAATT-----AAACTA-GCTTACTATGATTG O_garnettii300488 ---------TTTCTGTGATGAATC-----AAACTA-GCTCATTATGATTA O_garnettii300573 ---------TTTCTGTGATGAATC-----AAACTA-GCTCACTATGATTG P_troglodytes300459 ---------TTTCTATGATGAATC-----AAACTA-GCTCACTATGACCG P_pygmaeus300616 TATCAGTGATGATACTAAATAGCTC----ACTTTTTTAAAAAAGAGTCTT P_pygmaeus300533 ---------TTTCTATGATGAATC-----AAACTA-GCTCACTATGACTG R_norvegicus301030 ---------TTTCTGTGATGAATC-----AA-CTA-GCTCACTATGAC-T R_norvegicus301098 ---------TTTCTGTGATGAATC-----AA-CTA-GCTCACTATGAC-T S_cerevisiae300030 ---------GTTATATGATGATA----ACCTTCTCAGCTCACTCAGATCT S_araneus300245 ---------TTTCTATGATGATTA-----AAACTA-GCTCACTTTGATTT S_tridecemlineatus300196 ---------TTTCTATGATGACCCC----AAACTA-GCTCACTATGATTG S_tridecemlineatus300136 ---------TCATTATGATGAAAC----TTA--CTAGCTCACCATGCAGA T_nigroviridis300125 ---------GTGCAGTGATGATGA-----AACTTA-GCTCACTTTGA--- T_belangeri300019 ---------TTTCTATGATGAATA-----GAACTA-GCTCACTATGACTG T_belangeri300233 ---------TTTCTAGGATGAATA-----GAAGTA-GCTCACCATGACTG X_tropicalis300011 ---------TTGCTGTGATGAAAC-----TAACTA-GCTCACTTTGA--- * A_tauschii300258 CCTCCCTTTGTGGGCAGTCGTG--ATA-TGAACTTCTCTT--TTGTA-TC A_thaliana300155 CCT---TTTGTGGTCAAGGAAA--ATAACTGTTTTCTATA--ACGTA-TC C_elegans300114 ACAACTGGTGATAAAAAAATTTCGT-----GTCTTAGAGAC--------- C_familiaris300105 ACAC-----AATGAAAATAAGTGAA-----CACCTGAGAAAC-------- C_familiaris300168 TACAC----AATGAAATATTTTCTT-----GGTTA--------------- C_porcellus300578 ACTA-------TGAAAACACATGAA-----CACCTGAGAAAC-------- C_porcellus300812 ACTT-------TTC--ACACATGAA-----CACCTGAGAAAT-------- C_porcellus300839 TTATTTAGTTTTAATGAAAACTTAA-----CTTGAAATAG---------- D_rerio300224 -CCCAA---TGTGAAAAGTCACGAA-----CAACTGAGAGAT-------- D_novemcinctus300094 ACAC-----AATGTAAACATAAGAA-----CACCTGAGAAAC-------- D_melanogaster300155 TCA---ATGAA-GAGAACTGTTCCATATCCAACGCAAAAA--TAAACTGC D_melanogaster300157 TCT---ATGAA-GAGAACTGTTCCATATCCAACGCAAAAA--TAACTTGC D_melanogaster300158 TCT---ATGAA-GAAAACTGTTCCATATCCAACGCAAAAAATTATCTTGC D_melanogaster300160 ACA---ATGAA-GAGAACTGTTCCATATCCAACGCAAAAC--TAAAATGC E_telfairi300191 GTGATTCTTTTTGGAAATACATGAA-----CACCTAGAGGTC-------- E_caballus300030 AGAA-------TGAAAACAAGTGAA-----CACCTGAGAAAC-------- E_caballus300044 ATTAGTGTTGCTGAAAAGCATTGAA-----CTCCTGATCAAA-------- E_caballus300155 ACAC-----AGTGAAAACATGTGAA-----CACCTGCGAAAC-------- E_europaeus300048 AATAC----AATGAAGTTGTCACTT-----TGGCAGATGA---------- F_catus300172 ACAA-----AATGAAAGAATGTGAA-----AATGAAGA------------ H_sapiens300165 ACAG-------TGAAAATACATGAA-----CACCTGAGAAAC-------- M_mulatta300224 ACAG-------TGAAAATACATGAA-----CACCTGAGAAAT-------- M_murinus300140 GACAC----AATGAAAATGTGAGCA-----TCTGATAAAG---------- M_murinus300363 ACAA-------TGAAAACACGTGAA-----CACCTGAGAAAC-------- M_domestica300068 ACATAA---AATGAAAAGGCTTGAA-----CATCTGAGAAAC-------- M_musculus300713 GC-T-----AATGAAAACACAGGAA-----CACCTGAGAAAC-------- M_lucifugus300552 ACAT-----AATGAAAACATTTGAA-----CACCTGAGAAAC-------- O_anatinus302953 AACTAA---AATGAAAACCCTTGAA-----CATCTGAGAAAC-------- O_cuniculus300023 AT---------TCAAAAGACATGAT-----TATCAGAGTAAA-------- O_cuniculus300181 ACAG-------CAAGAACACATGAA-----CACCTGAGAAAC-------- O_cuniculus300184 GA-T-----TATGAAAACAGTTGAA-----CACCTAAGGGAA-------- O_cuniculus300345 ACCA-------TGAAAACACATGAA-----CACCCGAGAAAC-------- O_garnettii300194 ACAA-------TGAAAATACATGAA-----TACCTGAGAAAC-------- O_garnettii300248 ACAA-------TGAAAATACATGAA-----TACCTGAGAAAC-------- O_garnettii300488 ACAA-------GGAAAATACAGGAA-----CGCCTGGGAAAC-------- O_garnettii300573 ACAG-------TGAAAATACACGAA-----CACCTGAGAAAC-------- P_troglodytes300459 ACAG-------TGAAAATACATGAA-----CACCTGAGAAAC-------- P_pygmaeus300616 TTATTTATTTTTAGTAAAAACTTGA-----GATAG--------------- P_pygmaeus300533 ACAG-------TGAAAATACATGAA-----CACCTGAGAAAC-------- R_norvegicus301030 GC-T-----AATGAAAACACTGCTCACTTTTATTTCAGAAAG-------- R_norvegicus301098 GC-T-----AATGAAAACACTGGAA-----CACCTGAGAAAC-------- S_cerevisiae300030 TTTGATATGATTGATAAAAATTTCCTATCCAACATTCATC--AATTTATC S_araneus300245 GCAC-----GATGAAAATAAGTGAA-----CACCTGAGGAAC-------- S_tridecemlineatus300196 ACAA-------TGAAAATATATGAA-----CACCTGAGAAAC-------- S_tridecemlineatus300136 CTT---TCTATCTTTGAATAGT--ACAGTTGATATCAACA--AAAAAATG T_nigroviridis300125 -CCCCA---TGTGAAACGACAGGAA-----CATCTGAGCATC-------- T_belangeri300019 AAGA-------TGAAAATACGTGAA-----CACCTGAGAAAC-------- T_belangeri300233 ACAA-------TGAAA--ACGTGAA-----CACCTGAGAAAC-------- X_tropicalis300011 -ATAAA---GATGAAAAGTTAAGAA-----CACCTGAGCATC-------- A_tauschii300258 TGAGCCCA A_thaliana300155 TGAGCCA- C_elegans300114 -------- C_familiaris300105 -------- C_familiaris300168 -------- C_porcellus300578 -------- C_porcellus300812 -------- C_porcellus300839 -------- D_rerio300224 -------- D_novemcinctus300094 -------- D_melanogaster300155 TGACT--- D_melanogaster300157 TGACT--- D_melanogaster300158 TGACT--- D_melanogaster300160 TGATT--- E_telfairi300191 -------- E_caballus300030 -------- E_caballus300044 -------- E_caballus300155 -------- E_europaeus300048 -------- F_catus300172 -------- H_sapiens300165 -------- M_mulatta300224 -------- M_murinus300140 -------- M_murinus300363 -------- M_domestica300068 -------- M_musculus300713 -------- M_lucifugus300552 -------- O_anatinus302953 -------- O_cuniculus300023 -------- O_cuniculus300181 -------- O_cuniculus300184 -------- O_cuniculus300345 -------- O_garnettii300194 -------- O_garnettii300248 -------- O_garnettii300488 -------- O_garnettii300573 -------- P_troglodytes300459 -------- P_pygmaeus300616 -------- P_pygmaeus300533 -------- R_norvegicus301030 -------- R_norvegicus301098 -------- S_cerevisiae300030 TGACC--- S_araneus300245 -------- S_tridecemlineatus300196 -------- S_tridecemlineatus300136 TG------ T_nigroviridis300125 -------- T_belangeri300019 -------- T_belangeri300233 -------- X_tropicalis300011 --------

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