snOPY snoRNA Orthological Gene Database

Family: SNORA54

CLUSTAL W (1.83) multiple sequence alignment C_familiaris300462 --AGGCACCATTCGT-GGCCTC--TTAGCCTGGCTG--TGGCTGACGGGC C_familiaris300489 --AGGCACTGTTCGT-GGCCTG--CTAGCCTGGCTG--TGGCTGGTGGGC C_porcellus300954 --TGGCACTACTCGT-AACCTT--TTAACTTGGTTG--TAGCTAATGGGT D_rerio300102 --GTGCACTGTTCGT-AACCTGTTTCAGCCTACCAGTCTGAGATTTGGGT D_novemcinctus300211 --CAGCACTGTTCGT-GACCCG--CTAGCCTGTTTG--CTGCTAACGGGT D_melanogaster300247 GCGCGTACCCTCGAT--ATTTGGGCCTTCCGTGCCA--TGGAGCTCAATC E_telfairi300025 --ATGCACTGTTCGT-AACCTG--TTATCAGATTTA--CTGCTGACGGGT E_telfairi300264 --ATGCACTGTTTGT-AACCTG--TTATCAGATTTA--CTGCTGGCGGAT E_telfairi300771 --CTGCACTGTTCGT-AACCTG--TTATCAGATTTA--CTGCTGACGGGT E_caballus300387 --GAGCACTGTTCGT-GACCTG--TTAGTCTGGCTG--TGGCTTACAGGT E_europaeus300683 --GAGCACTGTTCGT-GACCTG--CCGGCCTGGCCG--TGGCTGACGGGT F_catus300228 --AGGCACTGTTCGT-GGCCTG--TCAGTCTGGCTG--TGGCTTACGGGC G_gallus300089 --ATGCACTGTTCGT-AACCTG--TTAGCAGTGTAATTCTGTTAACGGGT G_gallus300090 --TCGCACTGCTCGT-AACCTT--TTGACAGCATATTCCTGTGAATAGGT H_sapiens300731 --GAGCACTGTTCGT-AACCCG--TTAGCCTGGCTG--TAGCTAATGGGT M_mulatta300645 --GAGCACTGTTCGTTAACCTG--TTAGCCTGGCTG--TAGCTAATGGGT M_murinus300466 --GAGCACTGTTCGT-AACCTG--TTGACCTGACTG--TGGCTGACAGGT M_musculus300769 --CAGCACTGTTCGT-AACCTG--TCAGCCTTGCTG--TGGCTGGTGGGT M_lucifugus300096 --AAGCACTGTTCGT-GACCTG--TGGGCCGTGCTG--TGGCTAACGGGT M_lucifugus300105 --AAGCACTGTTCGT-GACCTG--TTAATCTTGCTG--TGGCTAACGGGT M_lucifugus300197 --AAGCACTGTTCGT-GACCTG--TGGGCCGTGCTG--TGGCTAACGGGT M_lucifugus300406 --AAGCACTATTCGT-GACCTG--TTGGCCGTGCTG--TGGCTAACGGGT M_lucifugus300786 --AAGCACTGTTCGT-GACCTG--TGGGCCGTGCTG--TGGCTAACGGGT M_lucifugus300966 --AAGCACTGTTCGT-GACCTG--TTAGTCTTGCTG--TGGCTAACGGGT O_cuniculus300427 --GAGCACTGTTCGT-GACCCG--ATAGCCTGGCTG--TGGCTGACGAGT O_cuniculus300507 --GAGCACTGTTTGT-AAACTG--TTAACCTGGCTG--TAG-TAACAGGT O_garnettii300477 --GGGCACTGTTTGT-AACCTG--TTGATTTGGCTA--TAGCTAATGGGC O_garnettii300608 --GAGCACTGTTCGT-AACCTG--TTGACTTGGCCA--TAGCTAACGGG- P_troglodytes300657 --GAGCACTGTTCGT-AACCCG--TTAGCCTGGCTG--TAGCTAATGGGT P_pygmaeus300732 --GAGCACTGTTCGT-AACCTG--TTAGCCTGGCTG--TAGCTAATGGGT R_norvegicus301094 --AAGCACTGTTCGT-AACCTG--TCAGTCTTGCTG--TGGCTGACGGGT S_tridecemlineatus300258 --TTGCACTGTTCGT-AACACG--TCGGCCTGGTTG--TAGCTGGCAGAT S_tridecemlineatus300343 --TTGCACTGTTCGT-AACCCT--TCAGCCTGGCTG--TGGCTGGCGGGT T_nigroviridis300033 --CTGCACCGTTCGT-AACCTGGTTCAGGTTCC--GTGTGA-ACTCGGGT * ** * C_familiaris300462 TCCATTCCAG--TGTGACAGCA---GTTCCAGCGGCACT----------T C_familiaris300489 TCCATTCCGA--TGCTACAGCA---GCTCCAGCAGCTCCAGCGGCATTGT C_porcellus300954 TCCATTCTAG--TGCCACAGAA---ATTCCAATGACACG----------T D_rerio300102 TCCATTCCAG--TGCAAGATTAATAAACTCAGTGAGGCAGGGGAG----- D_novemcinctus300211 TCCATTCCAG--TGCAACATTAT--GCCCCAGAACCGACAAC-------T D_melanogaster300247 TTCGCCAGGGGACGCAGAACAGTCAGGGCCAATTACTCGTTATTGCAG-- E_telfairi300025 TCCATTCCAG--TGCTACA-GAA--ATTCCCAGAATAATATAA------- E_telfairi300264 TCCATTCCAG--TGCTACA-GAA--ATTCCCAGAATAATGTAA------- E_telfairi300771 TCCATTCCAG--TGCTACA-GAA--ATCCCCAGAATAATATAA------- E_caballus300387 TCCATTCCAG--TGCTACAGGA---GTTCCAACGACACA----------T E_europaeus300683 TCCATTCCAG--TGCCACAGGA---ACTCCGGCACTGCTGTCGC-----T F_catus300228 TCCATTCCAG--TGCGACAGCA---TTTCCAACGGCACG----------T G_gallus300089 TCCATTCCGG--TGCTACATGAT--AACCCCAAGATAACAGAA------- G_gallus300090 TCCATTCCAG--TGCTACA--AC--AAATCCAG--TAATGGAA------- H_sapiens300731 TCCATTCCGG--TGCAATAGCA---TTTCCAGCGACACA----------T M_mulatta300645 TCCATTCCAG--TGCAATAGCA---TTTCCAGCGACACA----------T M_murinus300466 TCCATTCCAG--TGCAACAGCA---TGTCCAGGGACACA----------T M_musculus300769 TCCATTCCAG--TGCTACAGGA---TTTCCAGTGACACATGAC------T M_lucifugus300096 TCCATTCCAG--TGCGACAGCA---GCCCCACTGCCAGCACAC------T M_lucifugus300105 TCCATTCCAG--TGCTACAGCA---GTCCCAGTGAACCGTGAT------T M_lucifugus300197 TCCATTCCAG--TGCGACAGCA---GCCCCACTGCCAGCACAC------T M_lucifugus300406 TCCATTCCAG--TGCTACAGCA---GCCCCACTGCCACTACAC------T M_lucifugus300786 TCCATTCCAG--TGCGACAGCA---GCCCCACTGCCAGCACAC------T M_lucifugus300966 TCCATTCCAG--TGCTACAGCA---GTCCCAGTGAACTGTGAT------T O_cuniculus300427 TCCATTCCAG--TGCCACAGCAT--TGCCATGGATTGACACA-------C O_cuniculus300507 TCCAGTCCAG--TGCTACGGCA---TTTCCAAAGGCACA----------T O_garnettii300477 TCCATTCCAG--TGCAACAGAA---TTTCCAGGGACACA----------T O_garnettii300608 TCCAT-CCAG--TGCAACAGCA---TTTCCAGGGACACA----------T P_troglodytes300657 TCCATTCCGG--TGCAATAGCA---TTTCCAGCGACACA----------T P_pygmaeus300732 TCCATTCCGG--TGCAATAGCA---TTTCCAGCGACACA----------T R_norvegicus301094 TCCATTCCAG--TGCTACAGGA---TTTCCAGTGACACATGAC------T S_tridecemlineatus300258 TCCATTTCAG--TGCCACAGCA---TCTCCAGCAATACA----------T S_tridecemlineatus300343 TCCATTCCAG--TGCCACAGCA---TCTCCAGCAACACA----------T T_nigroviridis300033 TCCATTCCGG--TGCTAGA---GCAGCTCCGGTGAGGCAGGGGGG----- * * * C_familiaris300462 GACTGACTGCA--T-CGTGGCTCTCAGGTTCAGG-TCCTGGGGACACAG C_familiaris300489 GACTGAATGAC--T-CGTGGCTCTCAGTTTCAGG-TCCTGGGGACATGG C_porcellus300954 GACTGGCTGACA-CTAGTGTCTTTCAGTTTCAGGGAATTGGAGACAAAT D_rerio300102 TGGTGCCTCATTTGTGCTTTCTCCCTG-TTCACT-CTCTGATGACATTC D_novemcinctus300211 GACTGACTGGC--CGTGTGGCTCGCAGTTTTGGG-TCCTGGAGACACAG D_melanogaster300247 GCATTAGAAGCCATTGCGGTCCTGCATCTCCAAA-TATTGGCCACAGTT E_telfairi300025 GACTGACAAAACGTGTCTGTCTGAT---TTTATA-TTTGGGAGACAAAG E_telfairi300264 GACTGACAAAACTTGTCTGTCTGAT---TTTATA-TTTGGGAGACAAGG E_telfairi300771 GACTGACAAAACCCGTCTGTCTGAT---TTTATA-TTTGGGAGACAA-- E_caballus300387 GACTGACTGAC--T-GGTGGCTCTCAGCTTCAGG-TCTTGGAGACAAAG E_europaeus300683 CACCGACTGCC--C-CGAGGCTCTCGGTTTCAGG-TGCCGGAGACACTG F_catus300228 GACTGACTGAC--T-CGTGGCTCTCAGTTTCAGG-TCCTGGGGACACAA G_gallus300089 GGCTGGCTG--TTTGTTTGCCTGTTCCCTTTAT--TTTGGGGGACATAA G_gallus300090 GGCTGACAGACTCCATGTCCCT------TCCGTA-TTTGG-AGACATTC H_sapiens300731 GACTGACTGAC--T-GGTGGCTTTCAGTTTCAGG-TCTTGGAGACAAAT M_mulatta300645 GACTGACTGAC--T-GGTGGCTTTCAGTTTCAGG-TCTTGGAGACAAAT M_murinus300466 GACTGACTGGC--T-GATGGCTTTCAGTTTCAGG-TCTTGGAAACAAAT M_musculus300769 GACTGGCTGGC--T-AGTGGCTTTCAGTTTCAGG-TCTTGGAGACACAC M_lucifugus300096 GACCGCCTGA---T-GGTG-CTCTCAGTGTCAGG-TCTTGGACACAAGC M_lucifugus300105 GACTGACTGAC--T-GGTGGCTCTCAGTTTCAGG-TCTTGGAGACAAGC M_lucifugus300197 GACCGCCTGA---T-GGTG-CTCTCAGTGTCAGG-TCTTGGACACAAGC M_lucifugus300406 GACCGCCTGA---T-GGTGGCTCTCAGTTTCAGG-TCTTGGAGACAAGC M_lucifugus300786 GACCGCCTGA---T-GGTG-CTCTCAGTGTCAGG-TCTTGGACACAAGC M_lucifugus300966 GACTGACTGAC--T-GGTGGCTCTCAGTTTCGGG-TCTTGGAGACAAGC O_cuniculus300427 GACTGACTGCC--T-GGTGGCTTCCGGTTTCAG--TCCTGGAGACAAAT O_cuniculus300507 AACTGACTGAC--T-AGTGGCTTTCAGTTTCAGG-TCTTGGAGACAAAC O_garnettii300477 AACTGACTGAT--T-GGTGGATTTTGATTTGGGG-TCTTGGAGACATGC O_garnettii300608 GACTGACTGAC--T-GGTGGCTTTCAGTTTCAGG-TCTTGGAGACAAAT P_troglodytes300657 GACTGACTGAC--T-GGTGGCTTTCAGTTTCAGG-TCTTGGAGACAAAT P_pygmaeus300732 GACTGACTGAC--T-GGTGACTTTCAGTTTCAGG-TCTTGGGGACAAAT R_norvegicus301094 GACTGGCTGGC--T-AGTGGCTTTCAGTTTCAGG-TCTTGGAGACATAT S_tridecemlineatus300258 AACTGAC------C-AGTGGCTTTCAGTTTCAGG-TCTTGGAGTCAGTG S_tridecemlineatus300343 GACTGACTGAC--C-AGTGGCTTTCAGTTTCAGG-TCTTGGAGACAGTG T_nigroviridis300033 CGGCGCCCTCCTGCGCCCTGCTCCCCG-TTCACT-CTCCGGGAACACCG * **

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