Family: SNORA54

CLUSTAL W (1.83) multiple sequence alignment C_familiaris300462 --AGGCACCATTCGT-GGCCTC--TTAGCCTGGCTG--TGGCTGACGGGC C_familiaris300489 --AGGCACTGTTCGT-GGCCTG--CTAGCCTGGCTG--TGGCTGGTGGGC C_porcellus300954 --TGGCACTACTCGT-AACCTT--TTAACTTGGTTG--TAGCTAATGGGT D_rerio300102 --GTGCACTGTTCGT-AACCTGTTTCAGCCTACCAGTCTGAGATTTGGGT D_novemcinctus300211 --CAGCACTGTTCGT-GACCCG--CTAGCCTGTTTG--CTGCTAACGGGT D_melanogaster300247 GCGCGTACCCTCGAT--ATTTGGGCCTTCCGTGCCA--TGGAGCTCAATC E_telfairi300025 --ATGCACTGTTCGT-AACCTG--TTATCAGATTTA--CTGCTGACGGGT E_telfairi300264 --ATGCACTGTTTGT-AACCTG--TTATCAGATTTA--CTGCTGGCGGAT E_telfairi300771 --CTGCACTGTTCGT-AACCTG--TTATCAGATTTA--CTGCTGACGGGT E_caballus300387 --GAGCACTGTTCGT-GACCTG--TTAGTCTGGCTG--TGGCTTACAGGT E_europaeus300683 --GAGCACTGTTCGT-GACCTG--CCGGCCTGGCCG--TGGCTGACGGGT F_catus300228 --AGGCACTGTTCGT-GGCCTG--TCAGTCTGGCTG--TGGCTTACGGGC G_gallus300089 --ATGCACTGTTCGT-AACCTG--TTAGCAGTGTAATTCTGTTAACGGGT G_gallus300090 --TCGCACTGCTCGT-AACCTT--TTGACAGCATATTCCTGTGAATAGGT G_gorilla301064 --GAGCACTGTTCGT-AACCCG--TTAGCCTGGCTG--TAGCTAATGGGT H_sapiens300731 --GAGCACTGTTCGT-AACCCG--TTAGCCTGGCTG--TAGCTAATGGGT M_mulatta300645 --GAGCACTGTTCGTTAACCTG--TTAGCCTGGCTG--TAGCTAATGGGT M_murinus300466 --GAGCACTGTTCGT-AACCTG--TTGACCTGACTG--TGGCTGACAGGT M_musculus300769 --CAGCACTGTTCGT-AACCTG--TCAGCCTTGCTG--TGGCTGGTGGGT M_lucifugus300096 --AAGCACTGTTCGT-GACCTG--TGGGCCGTGCTG--TGGCTAACGGGT M_lucifugus300105 --AAGCACTGTTCGT-GACCTG--TTAATCTTGCTG--TGGCTAACGGGT M_lucifugus300197 --AAGCACTGTTCGT-GACCTG--TGGGCCGTGCTG--TGGCTAACGGGT M_lucifugus300406 --AAGCACTATTCGT-GACCTG--TTGGCCGTGCTG--TGGCTAACGGGT M_lucifugus300786 --AAGCACTGTTCGT-GACCTG--TGGGCCGTGCTG--TGGCTAACGGGT M_lucifugus300966 --AAGCACTGTTCGT-GACCTG--TTAGTCTTGCTG--TGGCTAACGGGT O_cuniculus300427 --GAGCACTGTTCGT-GACCCG--ATAGCCTGGCTG--TGGCTGACGAGT O_cuniculus300507 --GAGCACTGTTTGT-AAACTG--TTAACCTGGCTG--TAG-TAACAGGT O_garnettii300477 --GGGCACTGTTTGT-AACCTG--TTGATTTGGCTA--TAGCTAATGGGC O_garnettii300608 --GAGCACTGTTCGT-AACCTG--TTGACTTGGCCA--TAGCTAACGGG- P_troglodytes300657 --GAGCACTGTTCGT-AACCCG--TTAGCCTGGCTG--TAGCTAATGGGT P_pygmaeus300732 --GAGCACTGTTCGT-AACCTG--TTAGCCTGGCTG--TAGCTAATGGGT R_norvegicus301094 --AAGCACTGTTCGT-AACCTG--TCAGTCTTGCTG--TGGCTGACGGGT S_tridecemlineatus300258 --TTGCACTGTTCGT-AACACG--TCGGCCTGGTTG--TAGCTGGCAGAT S_tridecemlineatus300343 --TTGCACTGTTCGT-AACCCT--TCAGCCTGGCTG--TGGCTGGCGGGT T_nigroviridis300033 --CTGCACCGTTCGT-AACCTGGTTCAGGTTCC--GTGTGA-ACTCGGGT * ** * C_familiaris300462 TCCATTCCAG--TGTGACA---GCAGTTCCAGCGGCACT----------T C_familiaris300489 TCCATTCCGA--TGCTACA---GCAGCTCCAGCAGCTCCAGCGGCATTGT C_porcellus300954 TCCATTCTAG--TGCCACA---GAAATTCCAATGACACG----------T D_rerio300102 TCCATTCCAG--TGCAAGATTAATAAACTCAGTGAGGCAGGGGA----GT D_novemcinctus300211 TCCATTCCAG--TGCAACA---TTATGCCCCAGAACCGACAAC------T D_melanogaster300247 TTCGCCAGGGGACGCAGAACAGTCAGGGCCAATTACTCGTTATTGC--AG E_telfairi300025 TCCATTCCAG--TGCTACA--GAAATTCCCAGAATAATATA--------A E_telfairi300264 TCCATTCCAG--TGCTACA--GAAATTCCCAGAATAATGTA--------A E_telfairi300771 TCCATTCCAG--TGCTACA--GAAATCCCCAGAATAATATA--------A E_caballus300387 TCCATTCCAG--TGCTACA---GGAGTTCCAACGACACA----------T E_europaeus300683 TCCATTCCAG--TGCCACA---GGAACTCCGGCACTGCTGTCGC-----T F_catus300228 TCCATTCCAG--TGCGACA---GCATTTCCAACGGCACG----------T G_gallus300089 TCCATTCCGG--TGCTACAT-GATAACCCCAAGATAACAGA--------A G_gallus300090 TCCATTCCAG--TGCTACA---ACAAATCCAG--TAATGGA--------A G_gorilla301064 TCCATTCCGG--TGCGATA---GCATTTCCAGCGACACA----------T H_sapiens300731 TCCATTCCGG--TGCAATA---GCATTTCCAGCGACACA----------T M_mulatta300645 TCCATTCCAG--TGCAATA---GCATTTCCAGCGACACA----------T M_murinus300466 TCCATTCCAG--TGCAACA---GCATGTCCAGGGACACA----------T M_musculus300769 TCCATTCCAG--TGCTACA---GGATTTCCAGTGACACATGAC------T M_lucifugus300096 TCCATTCCAG--TGCGACA---GCAGCCCCACTGCCAGCACAC------T M_lucifugus300105 TCCATTCCAG--TGCTACA---GCAGTCCCAGTGAACCGTGAT------T M_lucifugus300197 TCCATTCCAG--TGCGACA---GCAGCCCCACTGCCAGCACAC------T M_lucifugus300406 TCCATTCCAG--TGCTACA---GCAGCCCCACTGCCACTACAC------T M_lucifugus300786 TCCATTCCAG--TGCGACA---GCAGCCCCACTGCCAGCACAC------T M_lucifugus300966 TCCATTCCAG--TGCTACA---GCAGTCCCAGTGAACTGTGAT------T O_cuniculus300427 TCCATTCCAG--TGCCACA---GCATTGCCATGGATTGACACA------C O_cuniculus300507 TCCAGTCCAG--TGCTACG---GCATTTCCAAAGGCACA----------T O_garnettii300477 TCCATTCCAG--TGCAACA---GAATTTCCAGGGACACA----------T O_garnettii300608 TCCAT-CCAG--TGCAACA---GCATTTCCAGGGACACA----------T P_troglodytes300657 TCCATTCCGG--TGCAATA---GCATTTCCAGCGACACA----------T P_pygmaeus300732 TCCATTCCGG--TGCAATA---GCATTTCCAGCGACACA----------T R_norvegicus301094 TCCATTCCAG--TGCTACA---GGATTTCCAGTGACACATGAC------T S_tridecemlineatus300258 TCCATTTCAG--TGCCACA---GCATCTCCAGCAATACA----------T S_tridecemlineatus300343 TCCATTCCAG--TGCCACA---GCATCTCCAGCAACACA----------T T_nigroviridis300033 TCCATTCCGG--TGCTAGA---GCAGCTCCGGTGAGGCAGGGGG----GC * * * * * C_familiaris300462 GACTGACTGCA--TCGTGGCTCTCAGGTT-CAGGTCCTGGGGACACAG C_familiaris300489 GACTGAATGAC--TCGTGGCTCTCAGTTT-CAGGTCCTGGGGACATGG C_porcellus300954 GACTGGCTGACACTAGTGTCTTTCAGTTTCAGGGAATTGGAGACAAAT D_rerio300102 GGTGCCTCATTTGTGCTTTCTCCCTGTTC--ACTCTCTGATGACATTC D_novemcinctus300211 GACTGACTGGC-CGTGTGGCTCGCAGTTT-TGGGTCCTGGAGACACAG D_melanogaster300247 GCATTAGAAGCCATTGCGGTCCTGCATCTCCAAATATTGGCCACAGTT E_telfairi300025 GACTGACAAAACGTGTCTGTCTGAT---TTTATATTTGGGAGACAAAG E_telfairi300264 GACTGACAAAACTTGTCTGTCTGAT---TTTATATTTGGGAGACAAGG E_telfairi300771 GACTGACAAAACCCGTCTGTCTGAT---TTTATATTTGGGAGACAA-- E_caballus300387 GACTGACTGAC--TGGTGGCTCTCAGCTT-CAGGTCTTGGAGACAAAG E_europaeus300683 CACCGACTGCC--CCGAGGCTCTCGGTTT-CAGGTGCCGGAGACACTG F_catus300228 GACTGACTGAC--TCGTGGCTCTCAGTTT-CAGGTCCTGGGGACACAA G_gallus300089 GGCTGGCTG--TTTGTTTGCCTGTTCCCTTTAT-TTTGGGGGACATAA G_gallus300090 GGCTGACAGACTCCATGTCCCT------TCCGTATTTGG-AGACATTC G_gorilla301064 GACTGACTGAC--TGGTGGCTTTCAGTTT-CAGGTCTTGGAGACAAAT H_sapiens300731 GACTGACTGAC--TGGTGGCTTTCAGTTT-CAGGTCTTGGAGACAAAT M_mulatta300645 GACTGACTGAC--TGGTGGCTTTCAGTTT-CAGGTCTTGGAGACAAAT M_murinus300466 GACTGACTGGC--TGATGGCTTTCAGTTT-CAGGTCTTGGAAACAAAT M_musculus300769 GACTGGCTGGC--TAGTGGCTTTCAGTTT-CAGGTCTTGGAGACACAC M_lucifugus300096 GACCGCCTGA---TGGTG-CTCTCAGTGT-CAGGTCTTGGACACAAGC M_lucifugus300105 GACTGACTGAC--TGGTGGCTCTCAGTTT-CAGGTCTTGGAGACAAGC M_lucifugus300197 GACCGCCTGA---TGGTG-CTCTCAGTGT-CAGGTCTTGGACACAAGC M_lucifugus300406 GACCGCCTGA---TGGTGGCTCTCAGTTT-CAGGTCTTGGAGACAAGC M_lucifugus300786 GACCGCCTGA---TGGTG-CTCTCAGTGT-CAGGTCTTGGACACAAGC M_lucifugus300966 GACTGACTGAC--TGGTGGCTCTCAGTTT-CGGGTCTTGGAGACAAGC O_cuniculus300427 GACTGACTGCC--TGGTGGCTTCCGGTTT--CAGTCCTGGAGACAAAT O_cuniculus300507 AACTGACTGAC--TAGTGGCTTTCAGTTT-CAGGTCTTGGAGACAAAC O_garnettii300477 AACTGACTGAT--TGGTGGATTTTGATTT-GGGGTCTTGGAGACATGC O_garnettii300608 GACTGACTGAC--TGGTGGCTTTCAGTTT-CAGGTCTTGGAGACAAAT P_troglodytes300657 GACTGACTGAC--TGGTGGCTTTCAGTTT-CAGGTCTTGGAGACAAAT P_pygmaeus300732 GACTGACTGAC--TGGTGACTTTCAGTTT-CAGGTCTTGGGGACAAAT R_norvegicus301094 GACTGGCTGGC--TAGTGGCTTTCAGTTT-CAGGTCTTGGAGACATAT S_tridecemlineatus300258 AACTGAC------CAGTGGCTTTCAGTTT-CAGGTCTTGGAGTCAGTG S_tridecemlineatus300343 GACTGACTGAC--CAGTGGCTTTCAGTTT-CAGGTCTTGGAGACAGTG T_nigroviridis300033 GGCGCCCTCCTGCGCCCTGCTCCCCGTTC--ACTCTCCGGGAACACCG * **