Family: SNORA49

CLUSTAL W (1.83) multiple sequence alignment C_familiaris300415 -------------------------------------------------- C_porcellus300546 -------------------------------------------------- D_novemcinctus300510 -------------------------------------------------- E_telfairi300870 -------------------------------------------------- E_caballus300302 -------------------------------------------------- F_catus300260 -------------------------------------------------- G_gorilla300322 -------------------------------------------------- H_sapiens300558 -------------------------------------------------- H_sapiens300769 -------------------------------------------------- M_mulatta300537 -------------------------------------------------- M_murinus300481 -------------------------------------------------- M_musculus300886 -------------------------------------------------- M_lucifugus300738 -------------------------------------------------- O_garnettii300075 -------------------------------------------------- O_garnettii300758 -------------------------------------------------- P_troglodytes300601 -------------------------------------------------- P_pygmaeus300657 -------------------------------------------------- R_norvegicus300866 -------------------------------------------------- S_araneus300781 -------------------------------------------------- S_tridecemlineatus300283 -------------------------------------------------- S_tridecemlineatus300285 -------------------------------------------------- T_belangeri300352 -------------------------------------------------- M_musculus300775 -----CTTCCTCAGCCTTACTCCAGGGGCTTC-TTG---CCTGTAGAGTG M_lucifugus300721 -----CTCCCTCAGCCTTACTCCAGGGGCCTT-TG-----CTGTAAGGTG O_anatinus302259 -----CTTCCTCAGCCTTACTCCAGGGGCTTT-CTT--GCTCATAGAGTG O_cuniculus300239 ----AGTCATAATGTTTTATTATAAAAATTTA-------CTGTTTTAGTG O_cuniculus300443 -----CTTCCTCAGCCTTACTCCAGGGTGGTT-TTG---CCTGTAAAGTG O_garnettii300023 -----ACTCCTCAGCCTTCCTCCAAGGGCTCA--TG---CCTGCTGAGTG O_garnettii300345 -----ACTCCTCAGCCTTCCTC-AAGGGCTCA--TG---CCTGCTGAGTG O_garnettii300389 -------------------------------T--TA---CCTA-AGC--- O_garnettii300625 --------CCATCACAGCCTACAAAGGAACTT--CA---AATACAGA--- O_garnettii300666 -----CTTCCTCAGCCTGACTCCAGGGGCTTTATTTTGTCTTGTGAAATG P_troglodytes300655 -----CTTCCTCAGCCTTACTCCAGGGACTTT-TTGTTGCCTGTAAAGTG P_pygmaeus300655 -----CTTCCTCAGCCTTACTCCAGGGGCTTT-TTGTTCCCTGTAAAGTG R_norvegicus301025 -----CTTCCTCAGCCTTACTCCAGGGGCTTC-TTG---CCTGTAGAGTG S_araneus300228 TTCCCTCATCTAAATTCTATCCCAGGGGCTTT-TTG---CCTGTAGAGTG S_araneus300681 -----TTCCCTCTGTCTTCCTCCAGGGG-TTT-TTG---CCTGTAGAGTG S_araneus300917 -----CTCCCTCAGCCTTACTCCAGGGG-CTT-TTG---CCTGTAGAGTG S_tridecemlineatus300267 -----CGTCCTCAGCCTTACTCCAGGGGCTTT-TTT--GCCTGTGAAGTG T_belangeri300061 -----CTTCCTCAGCCTTACTCCAGGGGCTTT-CTG---CCCGTAGAGTG T_belangeri300063 -----CATCCTTAGCCTTACTCCAGGGGTTTT-CTG---CCCGTAGAGTG C_familiaris300415 ---------------CTCCCAGCTCTCATGATGA----ACCCATATGCCT C_porcellus300546 ---------------GCCCCATCTCTCAGGATGA----A-CCCCACGCCT D_novemcinctus300510 ---------------TTCCCAGCTCTCGTGATGA----CTCCATGTGCCT E_telfairi300870 ---------------CTCCCCGCTCTCATGATGA----GCCCATGTGCCT E_caballus300302 ---------------CCCCCAGCTCTGGTGATGA----ACCCACGTGCCT F_catus300260 ---------------CCCCCAACTCTCACGATGA----ACCCATATGCCT G_gorilla300322 ---------------CCCCTGTCTCTCATGATGA----ACACATATGCCT H_sapiens300558 ---------------CCCCTATCTCTCATGATGA----ACACATATGCCT H_sapiens300769 -----------------CCACATGCGGCTGATGA-----CAGCACTTCTG M_mulatta300537 ---------------CCCCCTTCTCTTATGATGA----ACACATGTGCCT M_murinus300481 ---------------TGCCCATCTCTTATGATGA----AACCGTTTGCCT M_musculus300886 -----------------CTCCTGTCTGATGATGA-----GCCC-ATTGCC M_lucifugus300738 ---------------CCCCCAGCTCTCTTGATGA----ACCCATGTGCCT O_garnettii300075 ----------------------CTCTTATGATGA----ACCCATTTGCTT O_garnettii300758 ---------------CCCCCGTCTCTTATGATGA----ACCCATTTGCTT P_troglodytes300601 ---------------CCCCTATCTCTCATGATGA----ACACATATGCCT P_pygmaeus300657 ---------------TCCCTATCTCTCATGATGA----ACACATATGCCT R_norvegicus300866 -----------------CTCCTGTCTCATGATGA-----TCCCCACTGCC S_araneus300781 ---------------TCCCCAAGTCTAATGATGAT---ACCCAATTTCCT S_tridecemlineatus300283 --------------------TGCTTTTATGATGA----AACCATGTGCTT S_tridecemlineatus300285 ---------------TCCTTGTCTCTCATGATGA----AACCCTGTGCCT T_belangeri300352 ---------------CCCCCATCTCTCAGGATGA----GCCCCTCTGCCT M_musculus300775 CCCTG-----GCATTGCCTGAGGATAGAGGAGA-----AAGCACAGCTCC M_lucifugus300721 CCCTG-----GCATTGCCTGGGGGCACACGAAA-----AAGCGCACATCC O_anatinus302259 CCCTG-----GCATTGCCTGAGGATAAATCAAA-----AAGCCCATATCC O_cuniculus300239 CCCTG-----GCATTGCCTAAGGATAGATAAGA-----AAGCACAAATCC O_cuniculus300443 CCCTG-----GCATTGCCTGAGGATAGATGAGA-----AAGCACAGATCC O_garnettii300023 CCCTG-----GCATTGTCTGAGGATAGTCCAGC-----AAGCAC-CGTCC O_garnettii300345 CCCTG-----GCATTGTCTGAGGATAGTCCAGC-----AAGCAC-CGTCC O_garnettii300389 --CTG-----GCATTGCCCGAGGATGGACGAGC-----AAGCACACATCC O_garnettii300625 --ACA-----TCATTGCCTGAGGATAGACAAGC-----AAGCTCACGTCC O_garnettii300666 CCCTG-----GTATTGCCTGAGGATAGACGAGA-----AAGCACATGTCC P_troglodytes300655 CTCTG-----GCATTGCCTGAGGATAGATGAGA-----AAGCACATATCC P_pygmaeus300655 CCCTG-----GCATTGCCTGAGGATAGATGAGA-----AAGCACATATCC R_norvegicus301025 CCCTG-----GCATTGCCTGAGGATAGAGGAGA-----AAGCACAGCTCC S_araneus300228 CTCTG-----GCATTACCTGAGGGTA-ATGTGTGGGAAAAGTGCAATTCC S_araneus300681 CCCTG-----GCAATGACTGAGGGTACAGGAAAAGGAAAAGTAGACTTCC S_araneus300917 CCCTG-----GCATTGCCTGAGGGTACAGGAAA------AGCGCACTTCC S_tridecemlineatus300267 CCCTG-----GCATTGCCTGAGGATATAAGAGA-----AAGCACGTG--C T_belangeri300061 CCCTG-----GCATTGCCTGAGGAGACA-GCGA-----GAGCACGTTTCC T_belangeri300063 CCCTGCCCTGACATTGCCTGAGGAGAGA-GCGA-----GAGCACGTTCCC C_familiaris300415 CTGAGCTGCCATGATTCT--GGCTTCAAAGTAAACGCTCTGAAGAGATGG C_porcellus300546 CTGAGCCTCCATGATTCT--GGCTTCAAAGTAAACGCTCTGAAGAGACGG D_novemcinctus300510 CTGAGCTGCCATGATTCT--GGCTTCAAAGTAAACGCTCTGAAGAGATGG E_telfairi300870 CTGAGCTGCCGTGATTCA--GGCTTCAAAGTAAACGCTCTGAAGAAATGG E_caballus300302 CTGAGCTGTCGTGATTTT--GGCTTCAAAGTAAACGCTCTGAAGAGATGG F_catus300260 CTGAGTTGCCATGATTCT--GGCTTCAAAGTAAACGCTCTGAAGAGATGG G_gorilla300322 CTGAGCTGCTGTGATTTCT-GGCTTCAAAGTAAACGCTCTGAAGAAGAGA H_sapiens300558 CTGAGCTGCTGTGATTTCT-GGCTTCAAAGTAAACGCTCTGAAGAAGAGA H_sapiens300769 CTGAGACGCTGTGATTGCT-CTGTCCAAAGTAAACGCCCTGACGCACTGT M_mulatta300537 CTGAGCTGCTGTGATTTCT-GGCTTCAAAGTAAACGCTCTGAAGAAGAGA M_murinus300481 CTGAGCTGCCATGATTTT--GGCTTCAAAGTAAACGCTCTGAAGAAGAGT M_musculus300886 CTGAGCTCTTGTGAT-GCT-GGCTTCAAAGTAAACGCTCTGAAGTGAAGG M_lucifugus300738 CTGAGCTGCCATGATTCT--GGCTTCAAAGTAAACGCTCTGAAGAGATGG O_garnettii300075 CTGAGCTACTGTGATTT---GTCATTAAATTTAGCCTTTTAATCTGTAAA O_garnettii300758 CTGAGCTGCTGTGATTTTT-GGCTTCAAAGTAAACGCGCTGAAGAAGAGT P_troglodytes300601 CTGAGCTGCTGTGATTTCT-GGCTTCAAAGTAAACGCTCTGAAGAAGAGA P_pygmaeus300657 CTGAGCTGCTGTGATTTCT-GGCTTCAAAGTAAACGCTCTGAAGAAGAGA R_norvegicus300866 CTGAGCTGTTGTGAT-GCA-GGCTTCAAAGTAAACGCTCTGAAGCAATGG S_araneus300781 CTGAGCCACTGTTATTCT--GGCTTCAAAGTAAATGCTCTGATGAGATGG S_tridecemlineatus300283 CTGAGCTGCCATGATTCT--GGCTTCAAAGTAAATGCTCTGAAGAGTTGG S_tridecemlineatus300285 CTGAGCTGCCATGATTCT--GGCTTCAAAGTAAACGCTCTGAAGAGACAG T_belangeri300352 CTGAGCTGCCATGATTCT--GGCTTCAAAGTAAACGCTCTGAAGAGAGGG M_musculus300775 CTCCCT-AGCAAGACTCTG---CTTTCTTGTGGGGCCTACAGATTGGGCT M_lucifugus300721 CTCCCC-AGGAAGGCTCCG---TTCTCCTGTGGGGCCTACTGATTGCGCT O_anatinus302259 CTCCCC-AGTAGGAGCCTGA--TTTTCCTTTGGGGCCTACAGTTTGGGCT O_cuniculus300239 CTTCCC-ACGAAGATTCAAACTTCTTCTTCTGAGGCCTACAGATTGACCT O_cuniculus300443 CTCCCC-AGGAAGA-TTTGA--ACTTCTTTTGGGGCCTACAGTTTGAGCT O_garnettii300023 TCCCC--AGTGAGACTCTG---CTAACTTTTGGGGCCTGCTAGGTGAGCT O_garnettii300345 TCCCC--AGTGAGACTCTG---CTAACTTTTGGGGCCTGCTAGGTGAGCT O_garnettii300389 CTCCCC-AGTAAAACCCCG---CTATCTTTGGGGGCCTAGAAGGTGCGCT O_garnettii300625 CTCCCCCAGTAAGACTTTG---CTATCTTTTGGGGCCTACAAGGTGAGCT O_garnettii300666 TTCTCT-GCCAAGACTCTG---TTTTCTTTAAGGGCCTACGCGTTAAGCT P_troglodytes300655 CTCCCC-AGTAAGACGCTG---TTTTCTTTTGGGGCCTACAAGTTGAGCT P_pygmaeus300655 CTCCCC-AGTAAGACACTG---TTTTCTTTTGGGGCCTACAAGTTGAGCT R_norvegicus301025 CTCCCT-AGCAAGACTCTG---CTTTCTTGTGGGGCCTACAGATTGGGCT S_araneus300228 CT-TCC-AGGAAGACTATT------TCTATTTGGGCCTACAAGGTGAGTT S_araneus300681 TTCTTC-AGGATGACCATT------TCCATTGGGACCTACAAGGTGA-CT S_araneus300917 CTCCCC-AGGAAGACTGTG------TCCACTGGGGCCTACAAGGTGAGCT S_tridecemlineatus300267 CTCCCC-A-CAAGGCTCTG-----ATCTCGTGGG--CCACAGGCTGAGCT T_belangeri300061 CTCCCC-AGGAAGACACTG----T--TCTGTGGGGCCTA-AAAC-GAGCT T_belangeri300063 CTCCCC-AGAAACATGCTG----TGTTCTGTGAGGCCTATGAAT-GAGTT C_familiaris300415 AGCAGAGG------------------------------------------ C_porcellus300546 G-CAGAGG------------------------------------------ D_novemcinctus300510 -GCAGAGG------------------------------------------ E_telfairi300870 AGCCGAGC------------------------------------------ E_caballus300302 GGCAGAAG------------------------------------------ F_catus300260 GGCGGAGG------------------------------------------ G_gorilla300322 TGGGG--------------------------------------------- H_sapiens300558 TGGGG--------------------------------------------- H_sapiens300769 GG------------------------------------------------ M_mulatta300537 TGGGG--------------------------------------------- M_murinus300481 CAGGA--------------------------------------------- M_musculus300886 AGCAGGGC------------------------------------------ M_lucifugus300738 GGCAAAGG------------------------------------------ O_garnettii300075 GGC----------------------------------------------- O_garnettii300758 TGGGA--------------------------------------------- P_troglodytes300601 TGGGG--------------------------------------------- P_pygmaeus300657 TGGGG--------------------------------------------- R_norvegicus300866 AGCAAGGC------------------------------------------ S_araneus300781 GG------------------------------------------------ S_tridecemlineatus300283 GGAAAAGA------------------------------------------ S_tridecemlineatus300285 G-CAGAGG------------------------------------------ T_belangeri300352 GGCTTCCTCAGCCTTACTCCAGGGACTTTCTTGTCCATAGAGTGCCCTGG M_musculus300775 GACAGC-------------------------------------------- M_lucifugus300721 GACAGC-------------------------------------------- O_anatinus302259 GACACA-------------------------------------------- O_cuniculus300239 AATAGC-------------------------------------------- O_cuniculus300443 GACAGT-------------------------------------------- O_garnettii300023 GATGGT-------------------------------------------- O_garnettii300345 GATGGT-------------------------------------------- O_garnettii300389 GACAGT-------------------------------------------- O_garnettii300625 GACAGT-------------------------------------------- O_garnettii300666 GACAGT-------------------------------------------- P_troglodytes300655 GACAGT-------------------------------------------- P_pygmaeus300655 GACAGT-------------------------------------------- R_norvegicus301025 GACAGC-------------------------------------------- S_araneus300228 GACAGT-------------------------------------------- S_araneus300681 GACAGT-------------------------------------------- S_araneus300917 GACAGC-------------------------------------------- S_tridecemlineatus300267 GACAGT-------------------------------------------- T_belangeri300061 GACAGG-------------------------------------------- T_belangeri300063 GACAGT-------------------------------------------- C_familiaris300415 -------------------------------------------------- C_porcellus300546 -------------------------------------------------- D_novemcinctus300510 -------------------------------------------------- E_telfairi300870 -------------------------------------------------- E_caballus300302 -------------------------------------------------- F_catus300260 -------------------------------------------------- G_gorilla300322 -------------------------------------------------- H_sapiens300558 -------------------------------------------------- H_sapiens300769 -------------------------------------------------- M_mulatta300537 -------------------------------------------------- M_murinus300481 -------------------------------------------------- M_musculus300886 -------------------------------------------------- M_lucifugus300738 -------------------------------------------------- O_garnettii300075 -------------------------------------------------- O_garnettii300758 -------------------------------------------------- P_troglodytes300601 -------------------------------------------------- P_pygmaeus300657 -------------------------------------------------- R_norvegicus300866 -------------------------------------------------- S_araneus300781 -------------------------------------------------- S_tridecemlineatus300283 -------------------------------------------------- S_tridecemlineatus300285 -------------------------------------------------- T_belangeri300352 CATTGCCTGAGGAGAAAGCAGAAAGCACATTTCCCTCCCCATTAAGAGCC M_musculus300775 -------------------------------------------------- M_lucifugus300721 -------------------------------------------------- O_anatinus302259 -------------------------------------------------- O_cuniculus300239 -------------------------------------------------- O_cuniculus300443 -------------------------------------------------- O_garnettii300023 -------------------------------------------------- O_garnettii300345 -------------------------------------------------- O_garnettii300389 -------------------------------------------------- O_garnettii300625 -------------------------------------------------- O_garnettii300666 -------------------------------------------------- P_troglodytes300655 -------------------------------------------------- P_pygmaeus300655 -------------------------------------------------- R_norvegicus301025 -------------------------------------------------- S_araneus300228 -------------------------------------------------- S_araneus300681 -------------------------------------------------- S_araneus300917 -------------------------------------------------- S_tridecemlineatus300267 -------------------------------------------------- T_belangeri300061 -------------------------------------------------- T_belangeri300063 -------------------------------------------------- C_familiaris300415 ------------------------------------- C_porcellus300546 ------------------------------------- D_novemcinctus300510 ------------------------------------- E_telfairi300870 ------------------------------------- E_caballus300302 ------------------------------------- F_catus300260 ------------------------------------- G_gorilla300322 ------------------------------------- H_sapiens300558 ------------------------------------- H_sapiens300769 ------------------------------------- M_mulatta300537 ------------------------------------- M_murinus300481 ------------------------------------- M_musculus300886 ------------------------------------- M_lucifugus300738 ------------------------------------- O_garnettii300075 ------------------------------------- O_garnettii300758 ------------------------------------- P_troglodytes300601 ------------------------------------- P_pygmaeus300657 ------------------------------------- R_norvegicus300866 ------------------------------------- S_araneus300781 ------------------------------------- S_tridecemlineatus300283 ------------------------------------- S_tridecemlineatus300285 ------------------------------------- T_belangeri300352 TGATCTTCTTTTGGGGCCTACATTTGGAGCTGACATT M_musculus300775 ------------------------------------- M_lucifugus300721 ------------------------------------- O_anatinus302259 ------------------------------------- O_cuniculus300239 ------------------------------------- O_cuniculus300443 ------------------------------------- O_garnettii300023 ------------------------------------- O_garnettii300345 ------------------------------------- O_garnettii300389 ------------------------------------- O_garnettii300625 ------------------------------------- O_garnettii300666 ------------------------------------- P_troglodytes300655 ------------------------------------- P_pygmaeus300655 ------------------------------------- R_norvegicus301025 ------------------------------------- S_araneus300228 ------------------------------------- S_araneus300681 ------------------------------------- S_araneus300917 ------------------------------------- S_tridecemlineatus300267 ------------------------------------- T_belangeri300061 ------------------------------------- T_belangeri300063 -------------------------------------