Cavia_porcellus NOL5A | ||
organism | Cavia_porcellus | |
locus name | NOL5A | |
chromosome ⁄ contig | GeneScaffold_2774 | |
snoRNA list | SNORD110, SNORA51, SNORD86, SNORD56 | |
snoRNA position | 2262..2332, 3050..3181, 4038..4123, 4542..4608 | |
length | 7162 | |
sequence |
agcaggcagtcatgagttcaatccccggtaccgataaaaaggaaaaaggcaaaaaaaaa
aaaaaaagtatatatacatatatgtgtgtgtgtgtgtgtgtctattctggctaacagtcg tgagaatttaacacacaaaaacccaagaaagattaatttaccaaggcaaacactccttaa ggataaccagggtttggatttttttaactctattttttagtattatatgtgatgccgaag caagcacttaactctattatttaaaccaaaagtaaatttaaaaaccgtcacctgagcgcc cacagccagacatggaagcagctccctaatcctcggagctacttgcattgcacaacttaa ggccgaacccagccaagagcaacacgtggtcgcaagaaagagctaggtcccgtgaagcac agcaagaaatcggcgtagggagactttggggtcttctttccatattatttcctgtcacca tcttgttttcgttttttaaaataacattaaagaaaatgtaaacgcatgataaagacggga gcgggggggggggggggctagcacccgaacgctccaggcctcactctcgtccaggacagg gggaaatggggcaggcccccgggctcccgagggtggtccccgagctggacgaggggaccc caaggtctgtagccagaggtcaccagcgctgcctctgcgaccctgtctgcgatagcggcc ggactgcactgagctttgccgcccaccacatacttgctgagatcatatgggatcggacta gctgcactactgctttcccgagccattttgcagcctccaggccgggcgaaataccaccaa gaccccagcaccagttccgtcccgcgcagccgcagaaatccgaaaaggcctgttagcccg cgcttctcgccactagcacccaacctctggactataccacctggtgaatccgcctccgaa tgctcaataatggtatcgtccctggcttttgattggtcaatATGAAGAAGGCGTGGCGTT CGGAGTCAGCTTCCGCGCGCCAGAGCTTGCTAGCCGCATTGCGAGCCGGGCAAACAGCAA GCGCCATGgtgaggagtgggtgtgggttgtgggctatgcgaaggccgtggcgtgggtcaa gctttgggttccagcctgttcctgagcttggtcctgctctgagagCGGGGCCTGGTCGGC TTGGGAGCCTCGCTGACGTACGCGCCCCGGCTCCTGTTCCAGGTTCTGCTGCACGTGCTT TTCGAGCACGCGGTCGGCTACGCGCTTTTGGCGCTGAAGGAAGTGGAGGAGATCAGTCTG CTGCTGCCGCAGgtgggtgaaatctgtaagctcatccggctccactacatccttcgggct gccgagccccagcatgcaccgcgcgctcccacgtggtcggccgcgcagggtgggggggct aggctggaagcccctggagcagagagtctttaccttgattcctggttagaatcgcttaag agtgactaggtataagcctcccttactgtactccgtagcgataagttagtacttgaggtg cagggtccaggcatcggtaggttttaataatcagccgtttactgtactgtagtggtttga gcaacaaaaaaaaagtcgtccgtcattttcttcacagGTGGAGGAGTGTGTGCTCAACTT GGGCAAGTTCCACAACATCGTTCGCCTGGTGGCCTTTTGTCCATTTTCCTCTTCTCAGGT TGCCTTAGAAAATGCCAATGCAGTGTCTGAAGgtgagtgcatagggagatactgagatgt gattcctgctaatagtcctcttagtgggttaataacagtatttgcctttgagtggtttgt tacgcgtatgtgatgtgtactgggcagattttgagatttgtacgatgggatctaaaacag ttggtcctgactgctcaaggtctgacaagtatgaaagactaaatttcgatggcacacaat cccacgtgtagggtttatttccttgttggtgttataatgataaataattcctgatggaat gggtgggtgctgtgcctacctacacataagtactgtatgtagtttttttctgtgtcttcc aacttattgggaagggctattctgataaaggtcaagaaaagggggtttggtcctaggagg taaatcaggtactgaatgttcgaggacaggttatgatattcatatattttatgctggtgg ttttggacctgagtccatcttagtccattgtcaagccgggctttgcagtgatgacttgag aaatctgtcaatcccctgaatgtaatcactgatgtctccatgtctctgagcaatgcctga aggggaaacctgtaagcatgccatcctgtcatgctctgtgggaccagcataagctgaagt gataaatgagatcttttttgtaatgtaagcagtcttcagagttttagtggaagctctgtt cttttccctgagGCATTGTTCATGAGGACCTCCGTCTGCTCCTGGAGACCCACCTGCCGG CCAAAAAGAAGAAAGTACTCTTGGGGGTTGGGGACCCCAAGATTGGTGCTGCTATACAGG AGGAGTTGGGATACACCTGCCAGACTGGAGGCGTGATAGCAGAGATCCTGCGAGgtgaag tactcctgcagttcttgacaactttaaggggggttctggaaacatactaggatcctggag gttgcttctgggaatgcctaccctctgggtgtgggaacaagcctaagtcccctgctaaca gtcctaccttattcttagGAGTTCGTCTGCACTTCCATAACCTGGTTAAGGGTCTGACAG ATCTGTCAGCTTGTAAAGCCCAGCTAGGGCTGGGACACAGCTACTCTCGTGCCAAAGTAA AATTTAATGTGAACCGGGTAGACAACATGATCATCCAGTCCATCAGCCTCCTGGACCAGC TGGACAAAGACATCAATACCTTTTCTATGCGTGTCAGgtaaagtgcagtatttgatctgt agtttagctaatttttcatcctgagggtgggaccatgtgggctacagtagtgcctcctgg tgcttaccacaggcagtgttcttacactgactgtatagaaaaaggaggaagagtaaacct gccccatgtacacctcagcccaggccttgtgccttgtctgtattgtgaatggggaaacat aaggcctgaggcagatttgaatctgacttactctgtaatctccggataacacaggcatgg aaaaggttaaaggtgtggcagctgggccagagtgattattctcctttgcagGGAGTGGTA TGGGTATCACTTTCCAGAGCTGGTGAAGATCATCAATGACAATGCTACCTATTGCCGCCT TGCTCAATTCATTGGAAACCGAAGGGAGCTGAATGAGGAAAAATTAGAGAAGCTGGAGGA GCTCACAATGGATGGAGCCAAGGCTAAGGCTATCCTGGATGCCTCGAGGTCCTCCATGGg tcagtgcaaaaggctagcagctggcaaaaggtacgggactccgaatctctagcctttgtt cacactaggtgtttcctagGCATGGACATATCTGCCATCGACTTGATAAACATCGAGAGC TTCTCCAGTCGAGTGGTGTCTTTGTCAGAGTACCGCCAGAGCCTACACACTTACCTCCGC TCCAAGATGAGCCAAGTAGCCCCCAGCCTGTCAGCCCTAATTGGGGAAGCGgtgcgtcat ggggaacacacatggtggggagcaagagtgctaccattcacactgctatatttttagacc cacaatgtcttttccagttgggtgtaatggggaggaggagagcaggggttgtgcagctca ggtcagcaatttctacttccttaaatttttctccagGTAGGCGCACGTCTCATTGCTCAT GCTGGCAGCCTCACCAACCTGGCCAAGTATCCAGCATCCACAGTACAGATCCTTGGGGCT GAAAAGGCCCTGTTCAGgtacccgtgagggcacctgcccagatcaggtgccacttctggt gcgcactgcttatatgggaatcacagtgatggctaatcagggtgccctgacccatgcaga cctctgatatgggggtgatggccagtcctggtgtctgagtgattcccagggcccagcaaa gggatcaagcttccaggtcagcgacattggatgtcttccatctgcctctgggagttgtgg gttgatgtgttaacagtccagcccagcctgaggcttggctcatgctggagatttggaaag ggagggtttgggaggaactaccttggctgataggattgaattaaattctccactaaatat tctcagAGCCCTGAAGACAAGGGGTAACACACCAAAATATGGACTCATTTTCCACTCTAC CTTCATTGGCCGAGCAGCTGCCAAGAACAAAGGCCGCATCTCCCGATACCTGGCGAACAA GTGCAGTATTGCCTCCAGAATCGATTGCTTCTCTGgtatgggtggaagggttggcaattg gtagggctgggaggaaaagggtgctgagtaccttagcagcttctacaatgatggtaatat ttttcgtcaacagagttctaatgagtgttgatatattgggtctgagtgaagctgagtgtt gagggaattctgaggggtggtttatcactttggaggttaactagcttttctcccccacac acccacaatcagAGGTGCCCACCAGTGTATTTGGGGAGAAGCTTCGGGAACAAGTTGAAG AGCGCCTGTCCTTCTATGAGACTGGAGAGATTCCACGAAAGAATCTGGATGTCATGAAGG AGGCAATGGTTCAGgtcagtgggctctgctgggtggtagaaaaacagttggctgctggag gtgatgaactgtcttgacctgatcttgtataatggaggccaaaaaaaactgatttaatga gcctgatccagtaatgctggaagactatatagtgagacatggaactccaggccttttcag cactttgcttttgccagGCAGAGGAAGCTGCTGCTGAAATCACCAGGAAGCTGGCGAAAC AGGAGAAGAAGCGCTTAAAGAAGGAAAAGAAGCGCCTGGCTGCACTGGCCGCTTTGGCAT CTTCAGAAAACAGTAACACTCCAGAGGAACATGAGgtcagtcttggcaagtcagccctct aggatcctaggctgtgggttttcagcagaactgaaggtgtgctgcctgcctcagcccagt ctggagtccaggcttttggattgaaatatctaaaaaactacctcttgattctacatagga aggagataggtgctgagacaacttgctcaagagcccagagagctggttatagtgcacgcc tgttccctgggcaagttgtgttctgtcctcagctgcttcccagggactcttcagtaaatt actgctctgcttattctcagatgtatccagaaatggtatgatttcacagttggcatgggt gcagggaagtttccagtgtgccaggctagaatatttctctaaaggcatttagtgccattt gcaacatggtttgtttttcctttgtaatttggctgatagatccactgtgaccagcatgga gggtttttgtataagttagaggactgaagaaattctctttacatgttctccttcacttgt aattgggggtagctctaggggtggctttccaatgttactggcctccccagaagcatggac agtttgcttttctgccatgactttaatgggggaatgcacacacacatcctagataatacc tcttactgccttttcttggctttagGAGACTCAGGAAAAACCCAAAAAGAAAAAAAAGCA AAAACTCCAAGAGGTGCCTCAGGAGAACGGAATGGATGATCCATCTGTCTCTGTTTCCAA ACCCAAGAAAAAGAAATCTTTTTCCAAGGAAGAGTTGATTAATAGTGATATGGAAGAGAC AGCTGGTGGCAGCACAAGTCCACCCAAGAAGAAGAAGAAGTCTTTACCCAAGGAGGAAAC TGCTAGTGAACCAGAAGAGGCAGCCAGGAGTGTCCCCAAGAAAAAGAGAAAACTTTCTTC AAAGGAAGAACCAGTCAGCAGTGGGCCTGAGGAGGCTGCTGCCAATAAGGGCAGTGCCAA GAAAAAGAAGAAAAAGCTTCAGAGAACTTCCCAGGAGGATTAGaatggacattattccct ggggggtgggagtggggtgtgcccccacagtgacacttccctttccattccctaagtccc agtcaataaaaataaatccacaaaaaattggttattacataggttttattgaacgcctta tgtgggtgtgggcaggacctatgggtgggacagggcatcaatgacagcctcagtgaagtc gtggcaagtggcatagccacccatgtcagaggtccgaacctgttggggagaatggtcatc atcctgtggccaaggccccatcctgataaccccaccacatcacccagcatacacagctcc ctaaggaagccagcctcaggacgacctaggcactgcctaggaaagccattatggtccact gtctagaggtcaaggtctccactggtccactgaactgaagggatgggtgtgtaggtagta atggtccttgtgaggttggagggattaaagggctctagaccccatgggggtgtagatggc cgatgacagacttgatgaagtccgttgtggtactgtagccgcccatgtctcgagtccgca cctacagccaccaccggcaacagccgtggggaaaaaaagaagagagcccatgaagcaggg tagggcaatgtgatcagagacctgggacctaggaccccaaagtgctggagggccagaaaa gactgctacagtagagatgaaagaggctgcaaggtgaggggaaaggagctgcttgttctg agccagagctatgctacagaggctgagcagaagggagcaattgtaaagtgcccaccagag agggtgaggttacctcaggaaacgacaaaagtccaggagagaaaaaaggaagtgatgggc ttccaagcaaggagaagaaagtgaggctggcacctcaccctgcctgcttttggccccgct gcaccaccccaaatagctacacccttctgcattcagatggcccatgaaaggggcaatgga tacagcagaagagggcatagcac
Untranslated Region
Coding Sequence snoRNA |
|
exon position | 1001..1087, 1185..1331, 1657..1771, 2472..2633, 2778..2976, 3291..3478, 3559..3710, 3876..3976, 4326..4474, 4692..4813, 4997..5134, 5785..6162 | |
CDS position | 1001..1087, 1185..1331, 1657..1771, 2472..2633, 2778..2976, 3291..3478, 3559..3710, 3876..3976, 4326..4474, 4692..4813, 4997..5134, 5785..6162 | |
accession no |