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BLAST
Target RNA
About
Species
Box type
Target RNA
Organization
all
Aegilops_tauschii
Arabidopsis_thaliana
Caenorhabditis_elegans
Canis_familiaris
Cavia_porcellus
Ciona_intestinalis
Ciona_savignyi
Danio_rerio
Dasypus_novemcinctus
Drosophila_melanogaster
Echinops_telfairi
Equus_caballus
Erinaceus_europaeus
Felis_catus
Gallus_gallus
Gasterosteus_aculeatus
Gorilla_gorilla
Homo_sapiens
Hordeum_vulgare
Loxodonta_africana
Macaca_mulatta
Microcebus_murinus
Monodelphis_domestica
Mus_musculus
Myotis_lucifugus
Ornithorhynchus_anatinus
Oryctolagus_cuniculus
Oryza_sativa
Oryzias_latipes
Otolemur_garnettii
Pan_troglodytes
Physcomitrium_patens
Pongo_pygmaeus
Rattus_norvegicus
Saccharomyces_cerevisiae
Schizosaccharomyces_pombe
Sorex_araneus
Spermophilus_tridecemlineatus
Tetraodon_nigroviridis
Triticum_aestivum
Triticum_dicoccoides
Tupaia_belangeri
Xenopus_tropicalis
all
C/D
H/ACA
unknown
all
18S rRNA
28S rRNA
5.8S rRNA
U3 snoRNA
U4 snRNA
18S rRNA
18S rRNA
18SrRNA
25S rRNA
25S rRNA
25SrRNA
26S rRNA
28S rRN
28S rRNA
5'External Transcribed Spacer (ETS)
5.8S rRNA
?28S rRNA
Nonfunctional
U1 snRNA
U12 snRNA
U2 snRNA
U3
U3 snoRNA
U4 snRNA
U5 snRNA
U6 snRNA
Unknown
5.8S rRNA
all
Intronic
Mono
Poly
Keywords
Curation status
Locus View
all
curated
Species
snoRNA name
Box
Target RNA
Organization
Locus
Arabidopsis_thaliana
SnoR5a
H/ACA
18S rRNA
Poly
poly:U31a
Arabidopsis_thaliana
SnoR5b
H/ACA
18S rRNA
Poly
poly:U31b
Arabidopsis_thaliana
SnoR72
H/ACA
18S rRNA
Intronic
RPL32B
Arabidopsis_thaliana
SnoR72-2
H/ACA
18S rRNA
Intronic
resistance protein (TIR-NBS-LRR class)
Arabidopsis_thaliana
SnoR72-3
H/ACA
18S rRNA
Mono
Mono:SnoR72-3
Caenorhabditis_elegans
E01A2.9
H/ACA
18S rRNA
Intronic
E01A2.6
Canis_familiaris
SNORA40
H/ACA
Intronic
ENSCAFG00000004233
Cavia_porcellus
SNORA40
H/ACA
Intronic
LOC100722432
Cavia_porcellus
SNORA40
H/ACA
Poly
Mono:SNORA40
Cavia_porcellus
SNORA40
H/ACA
Intronic
C9orf102
Cavia_porcellus
SNORA40
H/ACA
Mono
Mono:276:SNORA40
Cavia_porcellus
SNORA40
H/ACA
Mono
Mono:425:SNORA40
Cavia_porcellus
SNORA40
H/ACA
Intronic
RASA2
Dasypus_novemcinctus
SNORA40
H/ACA
Poly
Poly:16:SNORA32
Drosophila_melanogaster
snoRNA:Psi18S-525a
H/ACA
18S rRNA
Intronic
Arc-p34
Drosophila_melanogaster
snoRNA:Psi18S-525b
H/ACA
18S rRNA
Intronic
Arc-p34
Drosophila_melanogaster
snoRNA:Psi18S-525c
H/ACA
18S rRNA
Intronic
Arc-p34
Drosophila_melanogaster
snoRNA:Psi18S-525d
H/ACA
18S rRNA
Intronic
Arc-p34
Drosophila_melanogaster
snoRNA:Psi18S-525e
H/ACA
18S rRNA
Intronic
Arc-p34
Drosophila_melanogaster
snoRNA:Psi18S-525f
H/ACA
18S rRNA
Intronic
Arc-p34
Drosophila_melanogaster
snoRNA:Psi18S-525g
H/ACA
18S rRNA
Intronic
Arc-p34
Drosophila_melanogaster
snoRNA:Psi18S-525h
H/ACA
18S rRNA
Intronic
Arc-p34
Drosophila_melanogaster
snoRNA:Psi18S-525i
H/ACA
18S rRNA
Intronic
Arc-p34
Drosophila_melanogaster
snoRNA:Psi18S-525j
H/ACA
18S rRNA
Intronic
Arc-p34
Drosophila_melanogaster
snoRNA:Psi18S-525k
H/ACA
18S rRNA
Intronic
Msp-300
Echinops_telfairi
SNORA40
H/ACA
Mono
Mono:250:SNORA40
Echinops_telfairi
SNORA40
H/ACA
Mono
Mono:36:SNORA40
Echinops_telfairi
SNORA40
H/ACA
Mono
Mono:366:SNORA40
Echinops_telfairi
SNORA40
H/ACA
Poly
Poly:7:SNORA32
Equus_caballus
SNORA40
H/ACA
Poly
Poly:8:SNORA40
Erinaceus_europaeus
SNORA40
H/ACA
Poly
Poly:6:SNORA48
Felis_catus
SNORA40
H/ACA
Mono
Mono:6:SNORA40
Gorilla_gorilla
SNORA40
unknown
mono
Mono:104:SNORA40
Gorilla_gorilla
SNORA40
unknown
mono
Mono:12:SNORA40
Gorilla_gorilla
SNORA40
unknown
mono
Mono:133:SNORA40
Gorilla_gorilla
SNORA40
unknown
mono
Mono:167:SNORA40
Gorilla_gorilla
SNORA40
unknown
mono
Mono:248:SNORA40
Gorilla_gorilla
SNORA40
unknown
mono
Mono:367:SNORA40
Gorilla_gorilla
SNORA40
unknown
mono
Mono:402:SNORA40
Gorilla_gorilla
SNORA40
unknown
mono
Mono:403:SNORA40
Gorilla_gorilla
SNORA40
unknown
mono
Mono:434:SNORA40
Gorilla_gorilla
SNORA40
unknown
mono
Mono:462:SNORA40
Gorilla_gorilla
SNORA40
unknown
mono
Mono:499:SNORA40
Gorilla_gorilla
SNORA40
unknown
Intronic
RAB3GAP1
Gorilla_gorilla
SNORA40
unknown
Intronic
SVOPL
Gorilla_gorilla
SNORA40
unknown
Intronic
TAF1D
Homo_sapiens
SNORA40 (ACA40)
H/ACA
28S rRNA,18S rRNA
Intronic
JOSD3
Homo_sapiens
SNORA40
H/ACA
28S rRNA,18S rRNA
Intronic
RAB3GAP1
Macaca_mulatta
SNORA40
H/ACA
Intronic
JOSD3
Macaca_mulatta
SNORA40
H/ACA
Mono
Mono:109:SNORA40
Macaca_mulatta
SNORA40
H/ACA
Mono
Mono:110:SNORA40
Macaca_mulatta
SNORA40
H/ACA
Mono
Mono:207:SNORA40
Macaca_mulatta
SNORA40
H/ACA
Mono
Mono:235:SNORA40
Macaca_mulatta
SNORA40
H/ACA
Mono
Mono:276:SNORA40
Macaca_mulatta
SNORA40
H/ACA
Mono
Mono:28:SNORA40
Macaca_mulatta
SNORA40
H/ACA
Mono
Mono:66:SNORA40
Macaca_mulatta
SNORA40
H/ACA
Mono
Mono:79:SNORA40
Macaca_mulatta
SNORA40
H/ACA
Intronic
RAB3GAP1
Microcebus_murinus
SNORA40
H/ACA
Intronic
IL23R
Microcebus_murinus
SNORA40
H/ACA
Mono
Mono:118:SNORA40
Microcebus_murinus
SNORA40
H/ACA
Mono
Mono:299:SNORA40
Microcebus_murinus
SNORA40
H/ACA
Mono
Mono:311:SNORA40
Microcebus_murinus
SNORA40
H/ACA
Poly
Poly:0:SNORA25
Microcebus_murinus
SNORA40
H/ACA
Intronic
PPP3R1
Monodelphis_domestica
SNORA40
H/ACA
Poly
Poly:9:SNORA40
Mus_musculus
SNORA40 (ACA40)
H/ACA
18S rRNA,28S rRNA
Mono
Mono:201:SNORA40
Mus_musculus
SNORA40 (ACA40)
H/ACA
18S rRNA,28S rRNA
Mono
Mono:92:SNORA40
Mus_musculus
SNORA40 (ACA40)
H/ACA
18S rRNA,28S rRNA
Poly
Poly:9:SNORA40
Mus_musculus
SNORA40 (ACA40)
H/ACA
18S rRNA,28S rRNA
Intronic
Rps16
Myotis_lucifugus
SNORA40
H/ACA
Mono
Mono:460:SNORA40
Myotis_lucifugus
SNORA40
H/ACA
18S rRNA,?28S rRNA
Intronic
TAF1D
Ornithorhynchus_anatinus
SNORA40
H/ACA
Poly
Poly:SNORA40
Ornithorhynchus_anatinus
SNORA40
H/ACA
Poly
Poly:SNORA40
Oryctolagus_cuniculus
SNORA40
H/ACA
Mono
Mono:0:SNORA40
Oryctolagus_cuniculus
SNORA40
H/ACA
Mono
Mono:118:SNORA40
Oryctolagus_cuniculus
SNORA40
H/ACA
Mono
Mono:126:SNORA40
Oryctolagus_cuniculus
SNORA40
H/ACA
Mono
Mono:17:SNORA40
Oryctolagus_cuniculus
SNORA40
H/ACA
Mono
Mono:23:SNORA40
Oryctolagus_cuniculus
SNORA40
H/ACA
Mono
Mono:29:SNORA40
Oryctolagus_cuniculus
SNORA40
H/ACA
Mono
Mono:44:SNORA40
Oryctolagus_cuniculus
SNORA40
H/ACA
Intronic
SCCPDH
Otolemur_garnettii
SNORA40
H/ACA
Mono
Mono:391:SNORA40
Otolemur_garnettii
SNORA40
H/ACA
Mono
Mono:490:SNORA40
Otolemur_garnettii
SNORA40
H/ACA
Mono
Mono:59:SNORA40
Pan_troglodytes
SNORA40
H/ACA
Intronic
JOSD3
Pan_troglodytes
SNORA40
H/ACA
Mono
Mono:122:SNORA40
Pan_troglodytes
SNORA40
H/ACA
Mono
Mono:149:SNORA40
Pan_troglodytes
SNORA40
H/ACA
Mono
Mono:161:SNORA40
Pan_troglodytes
SNORA40
H/ACA
Mono
Mono:17:SNORA40
Pan_troglodytes
SNORA40
H/ACA
Mono
Mono:222:SNORA40
Pan_troglodytes
SNORA40
H/ACA
Mono
Mono:272:SNORA40
Pan_troglodytes
SNORA40
H/ACA
Mono
Mono:286:SNORA40
Pan_troglodytes
SNORA40
H/ACA
Mono
Mono:299:SNORA40
Pan_troglodytes
SNORA40
H/ACA
Mono
Mono:46:SNORA40
Pan_troglodytes
SNORA40
H/ACA
Mono
Mono:5:SNORA40
Pan_troglodytes
SNORA40
H/ACA
Intronic
RAB3GAP1
Pongo_pygmaeus
SNORA40
H/ACA
Mono
Mono:134:SNORA40
Pongo_pygmaeus
SNORA40
H/ACA
Mono
Mono:187:SNORA40
Pongo_pygmaeus
SNORA40
H/ACA
Mono
Mono:199:SNORA40
Pongo_pygmaeus
SNORA40
H/ACA
Mono
Mono:225:SNORA40
Pongo_pygmaeus
SNORA40
H/ACA
Mono
Mono:283:SNORA40
Pongo_pygmaeus
SNORA40
H/ACA
Mono
Mono:288:SNORA40
Pongo_pygmaeus
SNORA40
H/ACA
Mono
Mono:330:SNORA40
Pongo_pygmaeus
SNORA40
H/ACA
Mono
Mono:37:SNORA40
Pongo_pygmaeus
SNORA40
H/ACA
Mono
Mono:69:SNORA40
Pongo_pygmaeus
SNORA40
H/ACA
Mono
Mono:97:SNORA40
Pongo_pygmaeus
SNORA40
H/ACA
Poly
Poly:21:SNORA25
Pongo_pygmaeus
SNORA40
H/ACA
Poly
Poly:7:SNORA40
Pongo_pygmaeus
SNORA40
H/ACA
Poly
Poly:7:SNORA40
Pongo_pygmaeus
SNORA40
H/ACA
Intronic
Q5RF09_PONPY
Rattus_norvegicus
SNORA40
H/ACA
Intronic
Josd3
Rattus_norvegicus
SNORA40
H/ACA
Mono
Mono:76:SNORA40
Rattus_norvegicus
SNORA40
H/ACA
Intronic
Psmc1
Rattus_norvegicus
SNORA40
H/ACA
Intronic
Rps16
Sorex_araneus
SNORA40
H/ACA
Mono
Mono:105:SNORA40
Sorex_araneus
SNORA40
H/ACA
Mono
Mono:811:SNORA40
Sorex_araneus
SNORA40
H/ACA
Intronic
NCOA6
Sorex_araneus
SNORA40
H/ACA
Poly
Poly:10:SNORA40
Spermophilus_tridecemlineatus
SNORA40
H/ACA
Intronic
ARHGAP29
Spermophilus_tridecemlineatus
SNORA40
H/ACA
Mono
Mono:144:SNORA40
Spermophilus_tridecemlineatus
SNORA40
H/ACA
Mono
Mono:194:SNORA40
Spermophilus_tridecemlineatus
SNORA40
H/ACA
Mono
Mono:196:SNORA40
Spermophilus_tridecemlineatus
SNORA40
H/ACA
Mono
Mono:65:SNORA40
Spermophilus_tridecemlineatus
SNORA40
H/ACA
Poly
Poly:10:SNORA25
Tupaia_belangeri
SNORA40
H/ACA
Intronic
ENSTBEG00000013929
Tupaia_belangeri
SNORA40
H/ACA
Mono
Mono:138:SNORA40
Tupaia_belangeri
SNORA40
H/ACA
Mono
Mono:14:SNORA40
Tupaia_belangeri
SNORA40
H/ACA
Mono
Mono:15:SNORA40
Tupaia_belangeri
SNORA40
H/ACA
Mono
Mono:200:SNORA40
Tupaia_belangeri
SNORA40
H/ACA
Mono
Mono:209:SNORA40
Tupaia_belangeri
SNORA40
H/ACA
Mono
Mono:223:SNORA40
Tupaia_belangeri
SNORA40
H/ACA
Mono
Mono:92:SNORA40
Tupaia_belangeri
SNORA40
H/ACA
Poly
Poly:16:SNORA25
Tupaia_belangeri
SNORA40
H/ACA
Intronic
STAU2
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