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BLAST
Target RNA
About
Species
Box type
Target RNA
Organization
all
Aegilops_tauschii
Arabidopsis_thaliana
Caenorhabditis_elegans
Canis_familiaris
Cavia_porcellus
Ciona_intestinalis
Ciona_savignyi
Danio_rerio
Dasypus_novemcinctus
Drosophila_melanogaster
Echinops_telfairi
Equus_caballus
Erinaceus_europaeus
Felis_catus
Gallus_gallus
Gasterosteus_aculeatus
Gorilla_gorilla
Homo_sapiens
Hordeum_vulgare
Loxodonta_africana
Macaca_mulatta
Microcebus_murinus
Monodelphis_domestica
Mus_musculus
Myotis_lucifugus
Ornithorhynchus_anatinus
Oryctolagus_cuniculus
Oryza_sativa
Oryzias_latipes
Otolemur_garnettii
Pan_troglodytes
Physcomitrium_patens
Pongo_pygmaeus
Rattus_norvegicus
Saccharomyces_cerevisiae
Schizosaccharomyces_pombe
Sorex_araneus
Spermophilus_tridecemlineatus
Tetraodon_nigroviridis
Triticum_aestivum
Triticum_dicoccoides
Tupaia_belangeri
Xenopus_tropicalis
all
C/D
H/ACA
unknown
all
18S rRNA
28S rRNA
5.8S rRNA
U3 snoRNA
U4 snRNA
18S rRNA
18S rRNA
18SrRNA
25S rRNA
25S rRNA
25SrRNA
26S rRNA
28S rRN
28S rRNA
5'External Transcribed Spacer (ETS)
5.8S rRNA
?28S rRNA
Nonfunctional
U1 snRNA
U12 snRNA
U2 snRNA
U3
U3 snoRNA
U4 snRNA
U5 snRNA
U6 snRNA
Unknown
5.8S rRNA
all
Intronic
Mono
Poly
Keywords
Curation status
Locus View
all
curated
Species
snoRNA name
Box
Target RNA
Organization
Locus
Caenorhabditis_elegans
R12E2.17 (CeN54)
C/D
26S rRNA
Intronic
rpn-8
Canis_familiaris
SNORD88
C/D
Mono
Mono:42:SNORD88
Canis_familiaris
SNORD88
C/D
Poly
Poly:25:SNORD88
Canis_familiaris
SNORD88
C/D
Poly
Poly:25:SNORD88
Canis_familiaris
SNORD88
C/D
Poly
Poly:25:SNORD88
Cavia_porcellus
SNORD88
C/D
Poly
Poly:SNORD88
Cavia_porcellus
SNORD88
C/D
Poly
Poly:SNORD88
Cavia_porcellus
SNORD88
C/D
Poly
Poly:SNORD88
Cavia_porcellus
SNORD88
C/D
Poly
Poly:SNORD88
Cavia_porcellus
SNORD88
C/D
Poly
Poly:SNORD88
Danio_rerio
SNORD88
C/D
28S rRNA
Intronic
si:dkey-105i19.5
Dasypus_novemcinctus
SNORD88
C/D
Mono
Mono:113:SNORD88
Dasypus_novemcinctus
SNORD88
C/D
Mono
Mono:242:SNORD88
Dasypus_novemcinctus
SNORD88
C/D
Mono
Mono:268:SNORD88
Dasypus_novemcinctus
SNORD88
C/D
Mono
Mono:302:SNORD88
Dasypus_novemcinctus
SNORD88
C/D
Mono
Mono:371:SNORD88
Echinops_telfairi
SNORD88
C/D
Mono
Mono:217:SNORD88
Echinops_telfairi
SNORD88
C/D
Mono
Mono:364:SNORD88
Echinops_telfairi
SNORD88
C/D
Mono
Mono:374:SNORD88
Echinops_telfairi
SNORD88
C/D
Mono
Mono:588:SNORD88
Equus_caballus
SNORD88
C/D
Poly
Poly:11:SNORD88
Equus_caballus
SNORD88
C/D
Poly
Poly:11:SNORD88
Equus_caballus
SNORD88
C/D
Poly
Poly:11:SNORD88
Equus_caballus
SNORD88
C/D
Poly
Poly:11:SNORD88
Erinaceus_europaeus
SNORD88
C/D
Mono
Mono:309:SNORD88
Erinaceus_europaeus
SNORD88
C/D
Poly
Poly:5:SNORD88
Erinaceus_europaeus
SNORD88
C/D
Poly
Poly:5:SNORD88
Gorilla_gorilla
SNORD88
unknown
Intronic
C19H19orf48
Gorilla_gorilla
SNORD88
unknown
Intronic
C19H19orf48
Gorilla_gorilla
SNORD88
unknown
Intronic
C19H19orf48
Gorilla_gorilla
SNORD88
unknown
mono
Mono:13:SNORD88
Homo_sapiens
SNORD88A (HBII-180A)
C/D
28S rRNA
Intronic
C19orf48
Homo_sapiens
SNORD88B (HBII-180B)
C/D
28S rRNA
Intronic
C19orf48
Homo_sapiens
SNORD88C (HBII-180C)
C/D
28S rRNA
Intronic
C19orf48
Loxodonta_africana
SNORD88
C/D
Mono
Mono:24:SNORD88
Loxodonta_africana
SNORD88
C/D
Mono
Mono:49:SNORD88
Loxodonta_africana
SNORD88
C/D
Poly
Poly:13:SNORD88
Loxodonta_africana
SNORD88
C/D
Poly
Poly:13:SNORD88
Macaca_mulatta
SNORD88
C/D
Mono
Mono:153:SNORD88
Macaca_mulatta
SNORD88
C/D
Poly
Poly:2:SNORD88
Macaca_mulatta
SNORD88
C/D
Poly
Poly:2:SNORD88
Macaca_mulatta
SNORD88
C/D
Poly
Poly:2:SNORD88
Microcebus_murinus
SNORD88
C/D
Mono
Mono:300:SNORD88
Microcebus_murinus
SNORD88
C/D
Poly
Poly:2:SNORD88
Microcebus_murinus
SNORD88
C/D
Poly
Poly:2:SNORD88
Microcebus_murinus
SNORD88
C/D
Poly
Poly:8:SNORD88
Microcebus_murinus
SNORD88
C/D
Poly
Poly:8:SNORD88
Microcebus_murinus
SNORD88
C/D
Poly
Poly:9:SNORD88
Microcebus_murinus
SNORD88
C/D
Poly
Poly:9:SNORD88
Monodelphis_domestica
SNORD88
C/D
Mono
Mono:23:SNORD88
Mus_musculus
SNORD88
C/D
28S rRNA
Intronic
2410002F23Rik
Mus_musculus
SNORD88
C/D
28S rRNA
Intronic
2410002F23Rik
Mus_musculus
SNORD88
C/D
28S rRNA
Intronic
2410002F23Rik
Mus_musculus
SNORD88
C/D
28S rRNA
Intronic
2410002F23Rik
Myotis_lucifugus
SNORD88
C/D
28S rRNA
Intronic
LOC102418972
Myotis_lucifugus
SNORD88
C/D
28S rRNA
Intronic
LOC102418972
Myotis_lucifugus
SNORD88
C/D
28S rRNA
Intronic
LOC102418972
Myotis_lucifugus
SNORD88
C/D
28S rRNA
Intronic
LOC102418972
Myotis_lucifugus
SNORD88
C/D
28S rRNA
Intronic
LOC102418972
Myotis_lucifugus
SNORD88
C/D
28S rRNA
Intronic
LOC102418972
Myotis_lucifugus
SNORD88
C/D
28S rRNA
Intronic
LOC106696001
Myotis_lucifugus
SNORD88
C/D
28S rRNA
Intronic
LOC106696001
Ornithorhynchus_anatinus
SNORD88
C/D
Mono
Mono:SNORD88
Oryctolagus_cuniculus
SNORD88
C/D
Mono
Mono:182:SNORD88
Oryzias_latipes
SNORD88
C/D
Mono
Mono:4:SNORD88
Otolemur_garnettii
SNORD88
C/D
Mono
Mono:306:SNORD88
Pan_troglodytes
SNORD88
C/D
Intronic
C19orf48
Pan_troglodytes
SNORD88
C/D
Intronic
C19orf48
Pan_troglodytes
SNORD88
C/D
Mono
Mono:177:SNORD88
Pan_troglodytes
SNORD88
C/D
Mono
Mono:212:SNORD88
Pongo_pygmaeus
SNORD88
C/D
Mono
Mono:335:SNORD88
Pongo_pygmaeus
SNORD88
C/D
Mono
Mono:77:SNORD88
Pongo_pygmaeus
SNORD88
C/D
Poly
Poly:9:SNORD88
Pongo_pygmaeus
SNORD88
C/D
Poly
Poly:9:SNORD88
Pongo_pygmaeus
SNORD88
C/D
Poly
Poly:9:SNORD88
Rattus_norvegicus
SNORD88
C/D
Mono
Mono:579:SNORD88
Rattus_norvegicus
SNORD88
C/D
Poly
Poly:12:SNORD88
Rattus_norvegicus
SNORD88
C/D
Poly
Poly:12:SNORD88
Rattus_norvegicus
SNORD88
C/D
Intronic
RGD1309326
Rattus_norvegicus
SNORD88
C/D
Intronic
RGD1309326
Saccharomyces_cerevisiae
snR76 (Z6)
C/D
25S rRNA
Poly
Poly:3:snR78
Spermophilus_tridecemlineatus
SNORD88
C/D
Mono
Mono:38:SNORD88
Spermophilus_tridecemlineatus
SNORD88
C/D
Poly
Poly:2:SNORD88
Spermophilus_tridecemlineatus
SNORD88
C/D
Poly
Poly:2:SNORD88
Tetraodon_nigroviridis
SNORD88
C/D
28S rRNA
Intronic
Poly:SNORD88
Tetraodon_nigroviridis
SNORD88
C/D
28S rRNA
Intronic
Poly:SNORD88
Tetraodon_nigroviridis
SNORD88
C/D
28S rRNA
Intronic
Poly:SNORD88
Tupaia_belangeri
SNORD88
C/D
Mono
Mono:2:SNORD88
Tupaia_belangeri
SNORD88
C/D
Mono
Mono:48:SNORD88
Tupaia_belangeri
SNORD88
C/D
Poly
Poly:15:SNORD88
Tupaia_belangeri
SNORD88
C/D
Poly
Poly:15:SNORD88
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