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BLAST
Target RNA
About
Species
Box type
Target RNA
Organization
all
Aegilops_tauschii
Arabidopsis_thaliana
Caenorhabditis_elegans
Canis_familiaris
Cavia_porcellus
Ciona_intestinalis
Ciona_savignyi
Danio_rerio
Dasypus_novemcinctus
Drosophila_melanogaster
Echinops_telfairi
Equus_caballus
Erinaceus_europaeus
Felis_catus
Gallus_gallus
Gasterosteus_aculeatus
Gorilla_gorilla
Homo_sapiens
Hordeum_vulgare
Loxodonta_africana
Macaca_mulatta
Microcebus_murinus
Monodelphis_domestica
Mus_musculus
Myotis_lucifugus
Ornithorhynchus_anatinus
Oryctolagus_cuniculus
Oryza_sativa
Oryzias_latipes
Otolemur_garnettii
Pan_troglodytes
Physcomitrium_patens
Pongo_pygmaeus
Rattus_norvegicus
Saccharomyces_cerevisiae
Schizosaccharomyces_pombe
Sorex_araneus
Spermophilus_tridecemlineatus
Tetraodon_nigroviridis
Triticum_aestivum
Triticum_dicoccoides
Tupaia_belangeri
Xenopus_tropicalis
all
C/D
H/ACA
unknown
all
18S rRNA
28S rRNA
5.8S rRNA
U3 snoRNA
U4 snRNA
18S rRNA
18S rRNA
18SrRNA
25S rRNA
25S rRNA
25SrRNA
26S rRNA
28S rRN
28S rRNA
5'External Transcribed Spacer (ETS)
5.8S rRNA
?28S rRNA
Nonfunctional
U1 snRNA
U12 snRNA
U2 snRNA
U3
U3 snoRNA
U4 snRNA
U5 snRNA
U6 snRNA
Unknown
5.8S rRNA
all
Intronic
Mono
Poly
Keywords
Curation status
Locus View
all
curated
Species
snoRNA name
Box
Target RNA
Organization
Locus
Arabidopsis_thaliana
SnoR77Y-1
C/D
18S rRNA,25S rRNA
Poly
poly:U49-1
Arabidopsis_thaliana
SnoR77Y-2
C/D
18S rRNA
Poly
poly:U49-2
Arabidopsis_thaliana
SnoR77Y-3
C/D
18S rRNA
Poly
poly:U49-3
Caenorhabditis_elegans
C16D9.11 (Ce86, CeN35)
C/D
18S rRNA
Intronic
rol-3
Canis_familiaris
SNORD65
C/D
Poly
poly:SNORD49
Cavia_porcellus
SNORD65
C/D
Poly
Poly:SNORD49
Danio_rerio
SNORD65
C/D
18S rRNA
Intronic
LOC100534731
Danio_rerio
SNORD65
C/D
18S rRNA
Intronic
LOC100534731
Dasypus_novemcinctus
SNORD65
C/D
Poly
Poly:11:SNORD49
Echinops_telfairi
SNORD65
C/D
Mono
Mono:532:SNORD65
Equus_caballus
SNORD65
C/D
Poly
Poly:15:SNORD65
Erinaceus_europaeus
SNORD65
C/D
Mono
Mono:421:SNORD65
Felis_catus
SNORD65
C/D
Mono
Mono:115:SNORD65
Gallus_gallus
SNORD65
C/D
Poly
Poly:1:SNORD65
Gasterosteus_aculeatus
SNORD65
C/D
Poly
Poly:3:SNORD65
Gasterosteus_aculeatus
SNORD65
C/D
Poly
Poly:3:SNORD65
Gasterosteus_aculeatus
SNORD65
C/D
Poly
Poly:3:SNORD65
Gasterosteus_aculeatus
SNORD65
C/D
Poly
Poly:3:SNORD65
Gasterosteus_aculeatus
SNORD65
C/D
Poly
Poly:3:SNORD65
Gorilla_gorilla
SNORD65
unknown
Intronic
LOC101131455
Gorilla_gorilla
SNORD65
unknown
mono
Mono:339:SNORD65
Gorilla_gorilla
SNORD65
unknown
mono
Mono:404:SNORD65
Gorilla_gorilla
SNORD65
unknown
mono
Mono:435:SNORD65
Gorilla_gorilla
SNORD65
unknown
mono
Mono:463:SNORD65
Homo_sapiens
SNORD65 (HBII-135)
C/D
18S rRNA
Intronic
C17orf45
Loxodonta_africana
SNORD65
C/D
Mono
Mono:23:SNORD65
Loxodonta_africana
SNORD65
C/D
Mono
Mono:88:SNORD65
Macaca_mulatta
SNORD65
C/D
Mono
Mono:191:SNORD65
Macaca_mulatta
SNORD65
C/D
Mono
Mono:257:SNORD65
Macaca_mulatta
SNORD65
C/D
Mono
Mono:69:SNORD65
Macaca_mulatta
SNORD65
C/D
Poly
Poly:17:SNORD65
Microcebus_murinus
SNORD65
C/D
Mono
Mono:209:SNORD65
Microcebus_murinus
SNORD65
C/D
Mono
Mono:219:SNORD65
Microcebus_murinus
SNORD65
C/D
Mono
Mono:277:SNORD65
Monodelphis_domestica
SNORD65
C/D
Poly
Poly:6:SNORD49
Monodelphis_domestica
SNORD65
C/D
Poly
Poly:6:SNORD49
Mus_musculus
SNORD65
C/D
18S rRNA
Poly
AV478545
Myotis_lucifugus
SNORD65
C/D
18S rRNA
Poly
Poly:31:SNORD49
Ornithorhynchus_anatinus
SNORD65
C/D
Intronic
ENSOANG00000022271
Ornithorhynchus_anatinus
SNORD65
C/D
Mono
Mono:SNORD65
Ornithorhynchus_anatinus
SNORD65
C/D
Intronic
ENSOANG00000022271
Oryctolagus_cuniculus
SNORD65
C/D
Mono
Mono:226:SNORD65
Oryctolagus_cuniculus
SNORD65
C/D
Mono
Mono:228:SNORD65
Oryzias_latipes
SNORD65
C/D
Poly
Poly:1:SNORD49
Oryzias_latipes
SNORD65
C/D
Poly
Poly:1:SNORD49
Otolemur_garnettii
SNORD65
C/D
Mono
Mono:405:SNORD65
Otolemur_garnettii
SNORD65
C/D
Mono
Mono:407:SNORD65
Otolemur_garnettii
SNORD65
C/D
Mono
Mono:477:SNORD65
Pan_troglodytes
SNORD65
C/D
Intronic
C17orf45
Pan_troglodytes
SNORD65
C/D
Mono
Mono:10:SNORD65
Pan_troglodytes
SNORD65
C/D
Mono
Mono:105:SNORD65
Pan_troglodytes
SNORD65
C/D
Mono
Mono:140:SNORD65
Pan_troglodytes
SNORD65
C/D
Mono
Mono:72:SNORD65
Pongo_pygmaeus
SNORD65
C/D
Intronic
C17orf45
Pongo_pygmaeus
SNORD65
C/D
Mono
Mono:11:SNORD65
Pongo_pygmaeus
SNORD65
C/D
Mono
Mono:121:SNORD65
Pongo_pygmaeus
SNORD65
C/D
Mono
Mono:192:SNORD65
Pongo_pygmaeus
SNORD65
C/D
Mono
Mono:210:SNORD65
Rattus_norvegicus
SNORD65
C/D
Intronic
Ank3
Rattus_norvegicus
SNORD65
C/D
Poly
Poly:8:SNORD49
Saccharomyces_cerevisiae
snR77 (Z7)
C/D
18S rRNA
Poly
Poly:3:snR78
Spermophilus_tridecemlineatus
SNORD65
C/D
Mono
Mono:164:SNORD65
Tetraodon_nigroviridis
SNORD65
C/D
18S rRNA
Poly
Poly:SNORD65
Tetraodon_nigroviridis
SNORD65
C/D
18S rRNA
Poly
Poly:SNORD65
Tupaia_belangeri
SNORD65
C/D
Mono
Mono:202:SNORD65
Tupaia_belangeri
SNORD65
C/D
Mono
Mono:77:SNORD65
Xenopus_tropicalis
SNORD65
C/D
Poly
Poly:4:snoR38
Xenopus_tropicalis
SNORD65
C/D
Poly
Poly:4:snoR38
Xenopus_tropicalis
SNORD65
C/D
Poly
Poly:4:snoR38
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