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BLAST
Target RNA
About
Species
Box type
Target RNA
Organization
all
Aegilops_tauschii
Arabidopsis_thaliana
Caenorhabditis_elegans
Canis_familiaris
Cavia_porcellus
Ciona_intestinalis
Ciona_savignyi
Danio_rerio
Dasypus_novemcinctus
Drosophila_melanogaster
Echinops_telfairi
Equus_caballus
Erinaceus_europaeus
Felis_catus
Gallus_gallus
Gasterosteus_aculeatus
Gorilla_gorilla
Homo_sapiens
Hordeum_vulgare
Loxodonta_africana
Macaca_mulatta
Microcebus_murinus
Monodelphis_domestica
Mus_musculus
Myotis_lucifugus
Ornithorhynchus_anatinus
Oryctolagus_cuniculus
Oryza_sativa
Oryzias_latipes
Otolemur_garnettii
Pan_troglodytes
Physcomitrium_patens
Pongo_pygmaeus
Rattus_norvegicus
Saccharomyces_cerevisiae
Schizosaccharomyces_pombe
Sorex_araneus
Spermophilus_tridecemlineatus
Tetraodon_nigroviridis
Triticum_aestivum
Triticum_dicoccoides
Tupaia_belangeri
Xenopus_tropicalis
all
C/D
H/ACA
unknown
all
18S rRNA
28S rRNA
5.8S rRNA
U3 snoRNA
U4 snRNA
18S rRNA
18S rRNA
18SrRNA
25S rRNA
25S rRNA
25SrRNA
26S rRNA
28S rRN
28S rRNA
5'External Transcribed Spacer (ETS)
5.8S rRNA
?28S rRNA
Nonfunctional
U1 snRNA
U12 snRNA
U2 snRNA
U3
U3 snoRNA
U4 snRNA
U5 snRNA
U6 snRNA
Unknown
5.8S rRNA
all
Intronic
Mono
Poly
Keywords
Curation status
Locus View
all
curated
Species
snoRNA name
Box
Target RNA
Organization
Locus
Arabidopsis_thaliana
SnoR15
C/D
18S rRNA,25S rRNA
Poly
Poly:U61-2
Arabidopsis_thaliana
U55
C/D
25S rRNA
Poly
Poly:U61
Canis_familiaris
SNORD55
C/D
28S rRNA
Intronic
ENSCAFG00000004745
Cavia_porcellus
SNORD55
C/D
Intronic
RPS8
Dasypus_novemcinctus
SNORD55
C/D
Poly
Poly:19:SNORD55
Echinops_telfairi
SNORD55
C/D
Intronic
ENSETEG00000004002
Echinops_telfairi
SNORD55
C/D
Intronic
VPS13B
Equus_caballus
SNORD55
C/D
Mono
Mono:23:SNORD55
Erinaceus_europaeus
SNORD55
C/D
Intronic
ENSEEUG00000009512
Erinaceus_europaeus
SNORD55
C/D
Intronic
ENSEEUG00000009512
Homo_sapiens
SNORD55 (U55,U39)
C/D
28S rRNA
Intronic
RPS8
Loxodonta_africana
SNORD55
C/D
Poly
Poly:33:SNORD38
Macaca_mulatta
SNORD55
C/D
Intronic
ENSMMUG00000015270
Macaca_mulatta
SNORD55
C/D
Mono
Mono:115:SNORD55
Macaca_mulatta
SNORD55
C/D
Mono
Mono:217:SNORD55
Microcebus_murinus
SNORD55
C/D
Mono
Mono:297:SNORD55
Microcebus_murinus
SNORD55
C/D
Mono
Mono:40:SNORD55
Microcebus_murinus
SNORD55
C/D
Mono
Mono:75:SNORD55
Microcebus_murinus
SNORD55
C/D
Intronic
RPS8
Monodelphis_domestica
SNORD55
C/D
Intronic
ENSMODG00000002583
Mus_musculus
SNORD55
C/D
28S rRNA
Intronic
Rps8
Myotis_lucifugus
SNORD55
C/D
Mono
Mono:345:SNORD55
Myotis_lucifugus
SNORD55
C/D
28S rRNA
Intronic
RPS8
Otolemur_garnettii
SNORD55
C/D
Mono
Mono:185:SNORD55
Otolemur_garnettii
SNORD55
C/D
Mono
Mono:422:SNORD55
Otolemur_garnettii
SNORD55
C/D
Intronic
RPS8
Pan_troglodytes
SNORD55
C/D
Mono
Mono:141:SNORD55
Pan_troglodytes
SNORD55
C/D
Mono
Mono:288:SNORD55
Pan_troglodytes
SNORD55
C/D
Intronic
RAMP1
Pan_troglodytes
SNORD55
C/D
Intronic
XR_021380.1
Pongo_pygmaeus
SNORD55
C/D
Mono
Mono:101:SNORD55
Pongo_pygmaeus
SNORD55
C/D
Mono
Mono:306:SNORD55
Pongo_pygmaeus
SNORD55
C/D
Intronic
RAMP1
Pongo_pygmaeus
SNORD55
C/D
Intronic
RPS8
Rattus_norvegicus
SNORD55
C/D
Mono
Mono:189:SNORD55
Sorex_araneus
SNORD55
C/D
Intronic
ENSSARG00000000899
Spermophilus_tridecemlineatus
SNORD55
C/D
Intronic
ENSSTOG00000006322
Tupaia_belangeri
SNORD55
C/D
Mono
Mono:152:SNORD55
Tupaia_belangeri
SNORD55
C/D
Mono
Mono:182:SNORD55
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