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BLAST
Target RNA
About
Species
Box type
Target RNA
Organization
all
Aegilops_tauschii
Arabidopsis_thaliana
Caenorhabditis_elegans
Canis_familiaris
Cavia_porcellus
Ciona_intestinalis
Ciona_savignyi
Danio_rerio
Dasypus_novemcinctus
Drosophila_melanogaster
Echinops_telfairi
Equus_caballus
Erinaceus_europaeus
Felis_catus
Gallus_gallus
Gasterosteus_aculeatus
Gorilla_gorilla
Homo_sapiens
Hordeum_vulgare
Loxodonta_africana
Macaca_mulatta
Microcebus_murinus
Monodelphis_domestica
Mus_musculus
Myotis_lucifugus
Ornithorhynchus_anatinus
Oryctolagus_cuniculus
Oryza_sativa
Oryzias_latipes
Otolemur_garnettii
Pan_troglodytes
Physcomitrium_patens
Pongo_pygmaeus
Rattus_norvegicus
Saccharomyces_cerevisiae
Schizosaccharomyces_pombe
Sorex_araneus
Spermophilus_tridecemlineatus
Tetraodon_nigroviridis
Triticum_aestivum
Triticum_dicoccoides
Tupaia_belangeri
Xenopus_tropicalis
all
C/D
H/ACA
unknown
all
18S rRNA
28S rRNA
5.8S rRNA
U3 snoRNA
U4 snRNA
18S rRNA
18S rRNA
18SrRNA
25S rRNA
25S rRNA
25SrRNA
26S rRNA
28S rRN
28S rRNA
5'External Transcribed Spacer (ETS)
5.8S rRNA
?28S rRNA
Nonfunctional
U1 snRNA
U12 snRNA
U2 snRNA
U3
U3 snoRNA
U4 snRNA
U5 snRNA
U6 snRNA
Unknown
5.8S rRNA
all
Intronic
Mono
Poly
Keywords
Curation status
Locus View
all
curated
Species
snoRNA name
Box
Target RNA
Organization
Locus
Arabidopsis_thaliana
SnoR37-1
C/D
25S rRNA
Poly
Poly:SnoR37-1
Arabidopsis_thaliana
SnoR37-2
C/D
25S rRNA
Poly
poly:SnoR37-2
Arabidopsis_thaliana
U53
C/D
25S rRNA
Intronic
AT3G14470
Caenorhabditis_elegans
B0041.9
C/D
26S rRNA
Intronic
rpl-4
Caenorhabditis_elegans
T10B9.11
C/D
26S rRNA
Mono
Mono:16:T10B9.11
Canis_familiaris
SNORD52
C/D
28S rRNA
Mono
Mono:110:SNORD52
Canis_familiaris
SNORD52
C/D
28S rRNA
Poly
Poly:15:SNORD48
Canis_familiaris
SNORD53
C/D
28S rRNA
Intronic
WDR43
Canis_familiaris
SNORD53
C/D
Unknown
Intronic
WDR43
Cavia_porcellus
SNORD52
C/D
Mono
Mono:72:SNORD52
Cavia_porcellus
SNORD53
C/D
Intronic
WDR43
Cavia_porcellus
SNORD53
C/D
Intronic
WDR43
Danio_rerio
SNORD52
C/D
28S rRNA
Intronic
si:ch211-152p11.8
Danio_rerio
SNORD52
C/D
28S rRNA
Intronic
si:ch211-152p11.8
Danio_rerio
SNORD52
C/D
28S rRNA
Intronic
si:ch211-152p11.8
Danio_rerio
SNORD52
C/D
28S rRNA
Intronic
si:ch211-152p11.8
Danio_rerio
SNORD52
C/D
28S rRNA
Intronic
si:ch211-152p11.8
Danio_rerio
SNORD52
C/D
28S rRNA
Intronic
si:ch211-152p11.8
Danio_rerio
SNORD52
C/D
28S rRNA
Intronic
si:ch211-152p11.8
Danio_rerio
SNORD52
C/D
28S rRNA
Intronic
si:ch211-152p11.8
Danio_rerio
SNORD53_SNORD92
C/D
28S rRNA
Intronic
arid4a
Danio_rerio
SNORD53_SNORD92
C/D
28S rRNA
Intronic
arid4a
Danio_rerio
SNORD53_SNORD92
C/D
28S rRNA
Intronic
arid4a
Danio_rerio
SNORD53_SNORD92
C/D
28S rRNA
Intronic
arid4a
Danio_rerio
SNORD53_SNORD92
C/D
28S rRNA
Intronic
arid4a
Dasypus_novemcinctus
SNORD52
C/D
Mono
Mono:158:SNORD52
Echinops_telfairi
SNORD52
C/D
Intronic
C6orf48
Echinops_telfairi
SNORD53
C/D
Intronic
WDR43
Equus_caballus
SNORD52
C/D
Poly
Poly:17:SNORD48
Equus_caballus
SNORD53
C/D
Intronic
WDR43
Equus_caballus
SNORD53
C/D
Intronic
WDR43
Erinaceus_europaeus
SNORD52
C/D
Intronic
ENSEEUG00000008454
Erinaceus_europaeus
SNORD53
C/D
Intronic
WDR43
Erinaceus_europaeus
SNORD53
C/D
Intronic
WDR43
Felis_catus
SNORD52
C/D
Poly
Poly:21:SNORD48
Felis_catus
SNORD53
C/D
Mono
Mono:24:SNORD53
Gallus_gallus
SNORD53
C/D
Intronic
NP_001006396.1
Homo_sapiens
SNORD52 (U52)
C/D
28S rRNA
Intronic
C6orf48
Homo_sapiens
SNORD53 (U53)
C/D
28S rRNA
Intronic
WDR43
Loxodonta_africana
SNORD52
C/D
Intronic
C6orf48
Loxodonta_africana
SNORD53
C/D
Intronic
WDR43
Macaca_mulatta
SNORD52
C/D
Poly
Poly:8:SNORD48
Macaca_mulatta
SNORD53
C/D
Intronic
WDR43
Macaca_mulatta
SNORD53
C/D
Intronic
WDR43
Microcebus_murinus
SNORD52
C/D
Intronic
C6orf48
Microcebus_murinus
SNORD53
C/D
Intronic
WDR43
Microcebus_murinus
SNORD53
C/D
Intronic
WDR43
Monodelphis_domestica
SNORD52
C/D
Poly
Poly:5:SNORD48
Monodelphis_domestica
SNORD53
C/D
Intronic
WDR43
Monodelphis_domestica
SNORD53
C/D
Intronic
WDR43
Mus_musculus
SNORD52
C/D
28S rRNA
Poly
Poly:10:SNORD52
Mus_musculus
SNORD52
C/D
28S rRNA
Poly
Poly:10:SNORD52
Mus_musculus
SNORD53
C/D
28S rRNA
Intronic
Wdr43
Mus_musculus
SNORD53
C/D
28S rRNA
Intronic
Wdr43
Myotis_lucifugus
SNORD52
C/D
28S rRNA
Intronic
LOC106694713
Myotis_lucifugus
SNORD52
C/D
28S rRNA
Mono
Mono:434:SNORD52
Myotis_lucifugus
SNORD52
C/D
28S rRNA
Mono
Mono:535:SNORD52
Myotis_lucifugus
SNORD53
C/D
28S rRNA
Intronic
WDR43
Myotis_lucifugus
SNORD53
C/D
28S rRNA
Intronic
WDR43
Oryctolagus_cuniculus
SNORD52
C/D
Intronic
C6orf48
Oryctolagus_cuniculus
SNORD53
C/D
Mono
Mono:153:SNORD53
Oryctolagus_cuniculus
SNORD53
C/D
Intronic
WDR43
Otolemur_garnettii
SNORD53
C/D
Intronic
WDR43
Otolemur_garnettii
SNORD53
C/D
Intronic
WDR43
Pan_troglodytes
SNORD52
C/D
Intronic
C6orf48
Pan_troglodytes
SNORD53
C/D
Intronic
WDR43
Pan_troglodytes
SNORD53
C/D
Intronic
WDR43
Pongo_pygmaeus
SNORD52
C/D
Intronic
ENSPPYG00000016464
Pongo_pygmaeus
SNORD53
C/D
Intronic
WDR43
Pongo_pygmaeus
SNORD53
C/D
Intronic
WDR43
Rattus_norvegicus
SNORD52
C/D
Poly
Poly:5:SNORD48
Rattus_norvegicus
SNORD53
C/D
Intronic
LOC362703
Rattus_norvegicus
SNORD53
C/D
Intronic
LOC362703
Saccharomyces_cerevisiae
snR78 (Z8)
C/D
25S rRNA
Poly
Poly:3:snR78
Sorex_araneus
SNORD52
C/D
Intronic
ENSSARG00000006697
Sorex_araneus
SNORD53
C/D
Intronic
WDR43
Sorex_araneus
SNORD53
C/D
Intronic
WDR43
Spermophilus_tridecemlineatus
SNORD52
C/D
Intronic
C6orf48
Spermophilus_tridecemlineatus
SNORD52
C/D
Mono
Mono:185:SNORD52
Spermophilus_tridecemlineatus
SNORD53
C/D
Intronic
WDR43
Tupaia_belangeri
SNORD52
C/D
Intronic
ENSTBEG00000005310
Tupaia_belangeri
SNORD53
C/D
Intronic
WDR43
Tupaia_belangeri
SNORD53
C/D
Intronic
WDR43
Xenopus_tropicalis
SNORD53
C/D
Mono
Mono:5:SNORD53
Copyright © 2008 Medical Biology, Faculty of Medicine, University of Miyazaki, All rights reserved
