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BLAST
Target RNA
About
Species
Box type
Target RNA
Organization
all
Aegilops_tauschii
Arabidopsis_thaliana
Caenorhabditis_elegans
Canis_familiaris
Cavia_porcellus
Ciona_intestinalis
Ciona_savignyi
Danio_rerio
Dasypus_novemcinctus
Drosophila_melanogaster
Echinops_telfairi
Equus_caballus
Erinaceus_europaeus
Felis_catus
Gallus_gallus
Gasterosteus_aculeatus
Gorilla_gorilla
Homo_sapiens
Hordeum_vulgare
Loxodonta_africana
Macaca_mulatta
Microcebus_murinus
Monodelphis_domestica
Mus_musculus
Myotis_lucifugus
Ornithorhynchus_anatinus
Oryctolagus_cuniculus
Oryza_sativa
Oryzias_latipes
Otolemur_garnettii
Pan_troglodytes
Physcomitrium_patens
Pongo_pygmaeus
Rattus_norvegicus
Saccharomyces_cerevisiae
Schizosaccharomyces_pombe
Sorex_araneus
Spermophilus_tridecemlineatus
Tetraodon_nigroviridis
Triticum_aestivum
Triticum_dicoccoides
Tupaia_belangeri
Xenopus_tropicalis
all
C/D
H/ACA
unknown
all
18S rRNA
28S rRNA
5.8S rRNA
U3 snoRNA
U4 snRNA
18S rRNA
18S rRNA
18SrRNA
25S rRNA
25S rRNA
25SrRNA
26S rRNA
28S rRN
28S rRNA
5'External Transcribed Spacer (ETS)
5.8S rRNA
?28S rRNA
Nonfunctional
U1 snRNA
U12 snRNA
U2 snRNA
U3
U3 snoRNA
U4 snRNA
U5 snRNA
U6 snRNA
Unknown
5.8S rRNA
all
Intronic
Mono
Poly
Keywords
Curation status
Locus View
all
curated
Species
snoRNA name
Box
Target RNA
Organization
Locus
Arabidopsis_thaliana
U38-1
C/D
25S rRNA
Poly
poly:U36a-2
Arabidopsis_thaliana
U38-2
C/D
25S rRNA
Poly
poly:U36a-1
Arabidopsis_thaliana
U38-3
C/D
25S rRNA,18S rRNA
Poly
poly:U36a-3
Caenorhabditis_elegans
B0334.12 (CeN118)
C/D
26S rRNA
Mono
Mono:18:B0334.12
Canis_familiaris
SNORD38
C/D
28S rRNA
Intronic
ENSCAFG00000004745
Canis_familiaris
SNORD38
C/D
28S rRNA
Intronic
ENSCAFG00000004745
Cavia_porcellus
SNORD38
C/D
Intronic
RPS8
Dasypus_novemcinctus
SNORD38
C/D
Mono
Mono:309:SNORD38
Dasypus_novemcinctus
SNORD38
C/D
Mono
Mono:39:SNORD38
Dasypus_novemcinctus
SNORD38
C/D
Poly
Poly:19:SNORD55
Drosophila_melanogaster
snoRNA:Me28S-A1322
C/D
28S rRNA
Intronic
Ef1alpha48D
Echinops_telfairi
SNORD38
C/D
Intronic
ENSETEG00000004002
Echinops_telfairi
SNORD38
C/D
Intronic
ENSETEG00000004002
Equus_caballus
SNORD38
C/D
Intronic
ENSECAG00000015089
Equus_caballus
SNORD38
C/D
Intronic
ENSECAG00000015089
Felis_catus
SNORD38
C/D
Intronic
RPS8
Gallus_gallus
SNORD38
C/D
Intronic
Q6EE57_CHICK
Gallus_gallus
SNORD38
C/D
Intronic
Q6EE57_CHICK
Gasterosteus_aculeatus
SNORD38
C/D
Poly
Poly:8:SNORD38
Gasterosteus_aculeatus
SNORD38
C/D
Poly
Poly:8:SNORD38
Gasterosteus_aculeatus
SNORD38
C/D
Poly
Poly:8:SNORD38
Gasterosteus_aculeatus
SNORD38
C/D
Intronic
RPS8
Gorilla_gorilla
SNORD38
C/D
Intronic
DCP1A
Gorilla_gorilla
SNORD38
C/D
mono
Mono:27:SNORD38
Gorilla_gorilla
SNORD38
C/D
mono
Mono:454:SNORD38
Gorilla_gorilla
SNORD38
C/D
Intronic
RPS8
Gorilla_gorilla
SNORD38
C/D
Intronic
RPS8
Homo_sapiens
SNORD38A (U38A)
C/D
28S rRNA
Intronic
RPS8
Homo_sapiens
SNORD38B
C/D
28S rRNA
Intronic
DCP1A
Homo_sapiens
SNORD38B (U38B)
C/D
28S rRNA
Intronic
RPS8
Loxodonta_africana
SNORD38
C/D
Poly
Poly:33:SNORD38
Macaca_mulatta
SNORD38
C/D
Intronic
DCP1A
Macaca_mulatta
SNORD38
C/D
Intronic
ENSMMUG00000015270
Macaca_mulatta
SNORD38
C/D
Intronic
ENSMMUG00000015270
Macaca_mulatta
SNORD38
C/D
Mono
Mono:190:SNORD38
Macaca_mulatta
SNORD38
C/D
Mono
Mono:312:SNORD38
Microcebus_murinus
SNORD38
C/D
Intronic
RPS8
Microcebus_murinus
SNORD38
C/D
Intronic
RPS8
Monodelphis_domestica
SNORD38
C/D
Intronic
ENSMODG00000002583
Monodelphis_domestica
SNORD38
C/D
Intronic
ENSMODG00000002583
Mus_musculus
SNORD38
C/D
28S rRNA
Mono
Mono:199:SNORD38
Mus_musculus
SNORD38
C/D
28S rRNA
Intronic
Rps8
Mus_musculus
SNORD38
C/D
28S rRNA
Intronic
Rps8
Myotis_lucifugus
SNORD38
C/D
28S rRNA
Intronic
RPS8
Myotis_lucifugus
SNORD38
C/D
28S rRNA
Intronic
RPS8
Ornithorhynchus_anatinus
SNORD38
C/D
Intronic
ENSOANG00000033332
Oryctolagus_cuniculus
SNORD38
C/D
Intronic
ENSOCUG00000012476
Oryctolagus_cuniculus
SNORD38
C/D
Intronic
ENSOCUG00000012476
Oryzias_latipes
SNORD38
C/D
Intronic
ACADM
Oryzias_latipes
SNORD38
C/D
Intronic
ACADM
Otolemur_garnettii
SNORD38
C/D
Intronic
ENSOGAG00000015930
Otolemur_garnettii
SNORD38
C/D
Mono
Mono:309:SNORD38
Otolemur_garnettii
SNORD38
C/D
Mono
Mono:397:SNORD38
Otolemur_garnettii
SNORD38
C/D
Intronic
RPS8
Pan_troglodytes
SNORD38
C/D
Intronic
DCP1A
Pan_troglodytes
SNORD38
C/D
Mono
Mono:104:SNORD38
Pan_troglodytes
SNORD38
C/D
Mono
Mono:306:SNORD38
Pan_troglodytes
SNORD38
C/D
Intronic
XR_021380.1
Pan_troglodytes
SNORD38
C/D
Intronic
XR_021380.1
Pongo_pygmaeus
SNORD38
C/D
Intronic
DCP1A
Pongo_pygmaeus
SNORD38
C/D
Mono
Mono:209:SNORD38
Pongo_pygmaeus
SNORD38
C/D
Mono
Mono:232:SNORD38
Pongo_pygmaeus
SNORD38
C/D
Intronic
RPS8
Pongo_pygmaeus
SNORD38
C/D
Intronic
RPS8
Rattus_norvegicus
SNORD38
C/D
Intronic
Rps8
Rattus_norvegicus
SNORD38
C/D
Intronic
Rps8
Saccharomyces_cerevisiae
snR61 (Z11)
C/D
25S rRNA
Poly
Poly:2:snR61
Sorex_araneus
SNORD38
C/D
Intronic
ENSSARG00000000899
Sorex_araneus
SNORD38
C/D
Intronic
ENSSARG00000000899
Sorex_araneus
SNORD38
C/D
Mono
Mono:461:SNORD38
Sorex_araneus
SNORD38
C/D
Mono
Mono:514:SNORD38
Spermophilus_tridecemlineatus
SNORD38
C/D
Intronic
ENSSTOG00000006322
Spermophilus_tridecemlineatus
SNORD38
C/D
Intronic
ENSSTOG00000006322
Tetraodon_nigroviridis
snosnR61
C/D
28S rRNA
Intronic
rps8a
Tupaia_belangeri
SNORD38
C/D
Intronic
ENSTBEG00000000418
Tupaia_belangeri
SNORD38
C/D
Intronic
ENSTBEG00000000418
Xenopus_tropicalis
SNORD38
C/D
Intronic
rps8
Xenopus_tropicalis
SNORD38
C/D
Intronic
rps8
Xenopus_tropicalis
SNORD38
C/D
Intronic
rps8
Xenopus_tropicalis
SNORD38
C/D
Intronic
rps8
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