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BLAST
Target RNA
About
Species
Box type
Target RNA
Organization
all
Aegilops_tauschii
Arabidopsis_thaliana
Caenorhabditis_elegans
Canis_familiaris
Cavia_porcellus
Ciona_intestinalis
Ciona_savignyi
Danio_rerio
Dasypus_novemcinctus
Drosophila_melanogaster
Echinops_telfairi
Equus_caballus
Erinaceus_europaeus
Felis_catus
Gallus_gallus
Gasterosteus_aculeatus
Gorilla_gorilla
Homo_sapiens
Hordeum_vulgare
Loxodonta_africana
Macaca_mulatta
Microcebus_murinus
Monodelphis_domestica
Mus_musculus
Myotis_lucifugus
Ornithorhynchus_anatinus
Oryctolagus_cuniculus
Oryza_sativa
Oryzias_latipes
Otolemur_garnettii
Pan_troglodytes
Physcomitrium_patens
Pongo_pygmaeus
Rattus_norvegicus
Saccharomyces_cerevisiae
Schizosaccharomyces_pombe
Sorex_araneus
Spermophilus_tridecemlineatus
Tetraodon_nigroviridis
Triticum_aestivum
Triticum_dicoccoides
Tupaia_belangeri
Xenopus_tropicalis
all
C/D
H/ACA
unknown
all
18S rRNA
28S rRNA
5.8S rRNA
U3 snoRNA
U4 snRNA
18S rRNA
18S rRNA
18SrRNA
25S rRNA
25S rRNA
25SrRNA
26S rRNA
28S rRN
28S rRNA
5'External Transcribed Spacer (ETS)
5.8S rRNA
?28S rRNA
Nonfunctional
U1 snRNA
U12 snRNA
U2 snRNA
U3
U3 snoRNA
U4 snRNA
U5 snRNA
U6 snRNA
Unknown
5.8S rRNA
all
Intronic
Mono
Poly
Keywords
Curation status
Locus View
all
curated
Species
snoRNA name
Box
Target RNA
Organization
Locus
Arabidopsis_thaliana
U31a
C/D
25S rRNA,18S rRNA
Poly
poly:U31a
Arabidopsis_thaliana
U31b
C/D
25S rRNA,18S rRNA
Poly
poly:U31b
Caenorhabditis_elegans
C27H5.9 (CeN63, Cb75)
C/D
26S rRNA
Poly
Poly:C27H5.10
Canis_familiaris
SNORD31
C/D
28S rRNA
Poly
Poly:24:SNORD25
Cavia_porcellus
SNORD31
C/D
28S rRNA
Poly
Poly:11:SNORD22
Danio_rerio
SNORD31
C/D
28S rRNA
Intronic
wu:fc55g01
Danio_rerio
SNORD31
C/D
28S rRNA
Intronic
wu:fc55g01
Danio_rerio
SNORD31
C/D
28S rRNA
Intronic
wu:fc55g01
Dasypus_novemcinctus
SNORD31
C/D
Poly
Poly:21:SNORD22
Drosophila_melanogaster
snoRNA:Me28S-G3081a
C/D
28S rRNA
Intronic
Uhg1
Drosophila_melanogaster
snoRNA:U31:54Eb
C/D
28S rRNA
Intronic
Uhg1
Drosophila_melanogaster
snoRNA:U31:54Ec
C/D
28S rRNA
Intronic
Uhg1
Drosophila_melanogaster
snoRNA:U31:54Ed
C/D
28S rRNA
Intronic
Uhg1
Equus_caballus
SNORD31
C/D
Poly
Poly:20:SNORD22
Erinaceus_europaeus
SNORD31
C/D
Mono
Mono:193:SNORD31
Erinaceus_europaeus
SNORD31
C/D
Mono
Mono:483:SNORD31
Felis_catus
SNORD31
C/D
Poly
Poly:26:SNORD22
Gasterosteus_aculeatus
SNORD31
C/D
Intronic
ENSGACG00000019819
Gasterosteus_aculeatus
SNORD31
C/D
Intronic
ENSGACG00000019819
Gasterosteus_aculeatus
SNORD31
C/D
Intronic
ENSGACG00000019819
Gasterosteus_aculeatus
SNORD31
C/D
Poly
Poly:2:SNORD31
Gasterosteus_aculeatus
SNORD31
C/D
Poly
Poly:2:SNORD31
Gorilla_gorilla
SNORD31
C/D
Intronic
LOC101131283
Gorilla_gorilla
SNORD31
C/D
Intronic
NALF1
Homo_sapiens
SNORD31
C/D
28S rRNA
Intronic
FAM155A
Homo_sapiens
SNORD31 (U31)
C/D
28S rRNA
Intronic
SNHG1
Loxodonta_africana
SNORD31
C/D
Poly
Poly:31:SNORD22
Macaca_mulatta
SNORD31
C/D
Mono
Mono:315:SNORD31
Macaca_mulatta
SNORD31
C/D
Poly
Poly:15:SNORD25
Microcebus_murinus
SNORD31
C/D
Mono
Mono:39:SNORD31
Microcebus_murinus
SNORD31
C/D
Mono
Mono:71:SNORD31
Microcebus_murinus
SNORD31
C/D
Poly
Poly:1:SNORD22
Monodelphis_domestica
SNORD31
C/D
Poly
Poly:13:SNORD22
Mus_musculus
SNORD31
C/D
28S rRNA
Poly
Poly:8:SNORD25
Myotis_lucifugus
SNORD31
C/D
28S rRNA
Poly
Poly:22:SNORD22
Ornithorhynchus_anatinus
SNORD31
C/D
Intronic
ENSOANG00000021427
Ornithorhynchus_anatinus
SNORD31
C/D
Poly
Poly:SNORD30
Oryctolagus_cuniculus
SNORD31
C/D
Poly
Poly:26:SNORD26
Oryctolagus_cuniculus
SNORD31
C/D
Poly
Poly:4:SNORD22
Oryzias_latipes
SNORD31
C/D
Poly
Poly:6:SNORD31
Oryzias_latipes
SNORD31
C/D
Poly
Poly:6:SNORD31
Otolemur_garnettii
SNORD31
C/D
Intronic
CALR3
Otolemur_garnettii
SNORD31
C/D
Mono
Mono:432:SNORD31
Otolemur_garnettii
SNORD31
C/D
Poly
Poly:8:SNORD25
Pan_troglodytes
SNORD31
C/D
Intronic
FAM155A
Pan_troglodytes
SNORD31
C/D
Poly
Poly:17:SNORD22
Pongo_pygmaeus
SNORD31
C/D
Poly
Poly:19:SNORD27
Pongo_pygmaeus
SNORD31
C/D
Poly
Poly:19:SNORD27
Pongo_pygmaeus
SNORD31
C/D
Intronic
Q5R908_PONPY
Rattus_norvegicus
SNORD31
C/D
Intronic
LOC686449
Saccharomyces_cerevisiae
snR67
C/D
25S rRNA
Poly
Poly:0:snR67
Sorex_araneus
SNORD31
C/D
Poly
Poly:6:SNORD22
Spermophilus_tridecemlineatus
SNORD31
C/D
Mono
Mono:89:SNORD31
Spermophilus_tridecemlineatus
SNORD31
C/D
Poly
Poly:11:SNORD22
Tetraodon_nigroviridis
SNORD31
C/D
28S rRNA
Poly
Poly:SNORD25
Tetraodon_nigroviridis
SNORD31
C/D
28S rRNA
Poly
Poly:SNORD25
Tupaia_belangeri
SNORD31
C/D
Poly
Poly:9:SNORD22
Xenopus_tropicalis
SNORD31
C/D
Poly
Poly:8:SNORD26
Xenopus_tropicalis
SNORD31
C/D
Poly
Poly:8:SNORD26
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