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BLAST
Target RNA
About
Species
Box type
Target RNA
Organization
all
Aegilops_tauschii
Arabidopsis_thaliana
Caenorhabditis_elegans
Canis_familiaris
Cavia_porcellus
Ciona_intestinalis
Ciona_savignyi
Danio_rerio
Dasypus_novemcinctus
Drosophila_melanogaster
Echinops_telfairi
Equus_caballus
Erinaceus_europaeus
Felis_catus
Gallus_gallus
Gasterosteus_aculeatus
Gorilla_gorilla
Homo_sapiens
Hordeum_vulgare
Loxodonta_africana
Macaca_mulatta
Microcebus_murinus
Monodelphis_domestica
Mus_musculus
Myotis_lucifugus
Ornithorhynchus_anatinus
Oryctolagus_cuniculus
Oryza_sativa
Oryzias_latipes
Otolemur_garnettii
Pan_troglodytes
Physcomitrium_patens
Pongo_pygmaeus
Rattus_norvegicus
Saccharomyces_cerevisiae
Schizosaccharomyces_pombe
Sorex_araneus
Spermophilus_tridecemlineatus
Tetraodon_nigroviridis
Triticum_aestivum
Triticum_dicoccoides
Tupaia_belangeri
Xenopus_tropicalis
all
C/D
H/ACA
unknown
all
18S rRNA
28S rRNA
5.8S rRNA
U3 snoRNA
U4 snRNA
18S rRNA
18S rRNA
18SrRNA
25S rRNA
25S rRNA
25SrRNA
26S rRNA
28S rRN
28S rRNA
5'External Transcribed Spacer (ETS)
5.8S rRNA
?28S rRNA
Nonfunctional
U1 snRNA
U12 snRNA
U2 snRNA
U3
U3 snoRNA
U4 snRNA
U5 snRNA
U6 snRNA
Unknown
5.8S rRNA
all
Intronic
Mono
Poly
Keywords
Curation status
Locus View
all
curated
Species
snoRNA name
Box
Target RNA
Organization
Locus
Aegilops_tauschii
SNORD96
C/D
5.8S rRNA,28S rRNA
Intronic
LOC109759974
Aegilops_tauschii
SNORD96
C/D
5.8S rRNA
Intronic
LOC109783600
Aegilops_tauschii
SNORD96
C/D
5.8S rRNA,28S rRNA
Intronic
LOC109784082
Aegilops_tauschii
SNORD96
C/D
Intronic
LOC120964291
Aegilops_tauschii
SNORD96
Mono
Mono21:SNORD96
Aegilops_tauschii
SNORD96
C/D
Mono
Mono51:SNORD96
Aegilops_tauschii
SNORD96
C/D
Poly
Poly1:snoR135
Aegilops_tauschii
SNORD96
C/D
Poly
Poly1:snoR135
Aegilops_tauschii
SNORD96
C/D
Poly
Poly11:SNORD14
Aegilops_tauschii
SNORD96
C/D
Poly
Poly11:SNORD14
Aegilops_tauschii
SNORD96
Poly
Poly13:SNORD14
Aegilops_tauschii
SNORD96
Poly
Poly13:SNORD14
Aegilops_tauschii
SNORD96
C/D
Poly
Poly2:snoZ103
Aegilops_tauschii
SNORD96
C/D
Poly
Poly39:SNORD24
Aegilops_tauschii
SNORD96
Poly
Poly4:SNORD14
Aegilops_tauschii
SNORD96
C/D
5.8S rRNA,28S rRNA
Poly
Poly42:snoR135
Aegilops_tauschii
SNORD96
C/D
Poly
Poly48:SNORD14
Aegilops_tauschii
SNORD96
Poly
Poly48:SNORD14
Aegilops_tauschii
SNORD96
Poly
Poly49:SNORD14
Aegilops_tauschii
SNORD96
Poly
Poly49:SNORD14
Aegilops_tauschii
SNORD96
C/D
Poly
Poly6:SNORD14
Aegilops_tauschii
SNORD96
Poly
Poly6:SNORD14
Aegilops_tauschii
SNORD96
Poly
Poly6:SNORD14
Aegilops_tauschii
SNORD96
C/D
Poly
Poly7:SNORD14
Arabidopsis_thaliana
39BYa
C/D
5.8S rRNA,25S rRNA
Poly
Poly:39BYa
Arabidopsis_thaliana
39BYb
C/D
5.8S rRNA,25S rRNA
Poly
Poly:39BYb
Caenorhabditis_elegans
T06C12.16 (CeN70)
C/D
26S rRNA
Mono
Mono:43:T06C12.16
Canis_familiaris
SNORD96
C/D
Intronic
TRIM7
Cavia_porcellus
SNORD2
C/D
Intronic
EIF4A2
Cavia_porcellus
SNORD96
C/D
Intronic
GNB2L1
Danio_rerio
SNORD2
C/D
28S rRNA
Intronic
eif4a2
Danio_rerio
SNORD2
C/D
28S rRNA
Intronic
eif4a2
Danio_rerio
SNORD2
C/D
28S rRNA
Intronic
eif4a2
Drosophila_melanogaster
snoRNA:Me28S-G980
C/D
28S rRNA
Intronic
sta
Drosophila_melanogaster
snoRNA:Me5.8S-G74
C/D
5.8S rRNA
Intronic
CG13900
Echinops_telfairi
SNORD96
C/D
Intronic
ENSETEG00000016024
Equus_caballus
SNORD96
C/D
Intronic
GNB2L1
Erinaceus_europaeus
SNORD96
C/D
Intronic
GNB2L1
Erinaceus_europaeus
SNORD96
C/D
Mono
Mono:183:SNORD96
Gorilla_gorilla
SNORD2
unknown
Intronic
EIF4A2
Gorilla_gorilla
SNORD2
unknown
mono
Mono:511:SNORD2
Gorilla_gorilla
SNORD96
C/D
Intronic
RACK1
Homo_sapiens
SNORD2 (snR39B)
C/D
28S rRNA
Intronic
EIF4A2
Homo_sapiens
SNORD96A (U96a)
C/D
5.8S rRNA
Intronic
GNB2L1
Homo_sapiens
SNORD96B (U96b)
C/D
5.8S rRNA
Intronic
AMMECR1
Loxodonta_africana
SNORD96
C/D
Intronic
GNB2L1
Macaca_mulatta
SNORD96
C/D
Intronic
AMMECR1
Macaca_mulatta
SNORD96
C/D
Intronic
GNB2L1
Microcebus_murinus
SNORD96
C/D
Intronic
GNB2L1
Mus_musculus
SNORD96
C/D
5.8S rRNA
Intronic
Gnb2l1
Myotis_lucifugus
SNORD2
C/D
28S rRNA
Intronic
EIF4A2
Ornithorhynchus_anatinus
SNORD2
C/D
Mono
Mono:SNORD2
Oryctolagus_cuniculus
SNORD96
C/D
Intronic
GNB2L1
Otolemur_garnettii
SNORD96
C/D
Intronic
GNB2L1
Pan_troglodytes
SNORD96
C/D
Intronic
AMMECR1
Pan_troglodytes
SNORD96
C/D
Intronic
GNB2L1
Pongo_pygmaeus
SNORD96
C/D
Intronic
AMER1_PONPY
Pongo_pygmaeus
SNORD96
C/D
Intronic
ENSPPYG00000019939
Saccharomyces_cerevisiae
snR39b
C/D
25S rRNA
Mono
Mono:16:snR39B
Sorex_araneus
SNORD96
C/D
Intronic
GNB2L1
Spermophilus_tridecemlineatus
SNORD96
C/D
Intronic
GNB2L1
Spermophilus_tridecemlineatus
SNORD96
C/D
Mono
Mono:29:SNORD96
Tetraodon_nigroviridis
SNORD2
C/D
28S rRNA
Poly
Poly:SNORD2
Tetraodon_nigroviridis
SNORD2
C/D
28S rRNA
Poly
Poly:SNORD2
Tetraodon_nigroviridis
SNORD2
C/D
28S rRNA
Intronic
eif4a2
Triticum_aestivum
SNORD96
28S rRNA, 5.8S rRNA
Intronic
LOC123115553
Triticum_aestivum
SNORD96
5.8S rRNA,28S rRNA
Mono
Mono7:SNORD96
Triticum_aestivum
SNORD96
C/D
5.8S rRNA,28S rRNA
Poly
Poly11:snoU36a
Triticum_aestivum
SNORD96
C/D
5.8S rRNA,28S rRNA
Poly
Poly12:snoU36a
Triticum_aestivum
SNORD96
C/D
28S rRNA, 5.8S rRNA
Poly
Poly14:snoR135
Triticum_aestivum
SNORD96
C/D
5.8S rRNA,28S rRNA
Poly
Poly14:snoR135
Triticum_aestivum
SNORD96
C/D
28S rRNA, 5.8S rRNA
Poly
Poly24:snoR135
Triticum_aestivum
SNORD96
28S rRNA, 5.8S rRNA
Poly
Poly33:snoU36a
Triticum_aestivum
SNORD96
C/D
5.8S rRNA,28S rRNA
Poly
Poly60:snoZ107_R87
Triticum_aestivum
SNORD96
C/D
5.8S rRNA,28S rRNA
Poly
Poly60:snoZ107_R87
Triticum_aestivum
SNORD96
C/D
28S rRNA, 5.8S rRNA
Poly
Poly9:snoU36a
Triticum_dicoccoides
SNORD96
C/D
28S rRNA, 5.8S rRNA
Mono
Mono:29:SNORD96
Triticum_dicoccoides
SNORD96
C/D
28S rRNA, 5.8S rRNA
Mono
Mono:30:SNORD96
Triticum_dicoccoides
SNORD96
C/D
28S rRNA, 5.8S rRNA
Poly
Poly17:SNORD14
Triticum_dicoccoides
SNORD96
C/D
28S rRNA, 5.8S rRNA
Poly
Poly17:SNORD14
Triticum_dicoccoides
SNORD96
5.8S rRNA,28S rRNA
Poly
Poly32:snoZ223
Triticum_dicoccoides
SNORD96
C/D
5.8S rRNA,28S rRNA
Poly
Poly36:snoR135
Triticum_dicoccoides
SNORD96
C/D
5.8S rRNA,28S rRNA
Poly
Poly41:SNORD96
Triticum_dicoccoides
SNORD96
C/D
5.8S rRNA,28S rRNA
Poly
Poly41:SNORD96
Triticum_dicoccoides
SNORD96
C/D
5.8S rRNA,28S rRNA
Poly
Poly43:SNORD36
Triticum_dicoccoides
SNORD96
C/D
5.8S rRNA,28S rRNA
Poly
Poly47:snoZ43
Triticum_dicoccoides
SNORD96
C/D
5.8S rRNA,28S rRNA
Poly
Poly47:snoZ43
Xenopus_tropicalis
SNORD96
C/D
Intronic
EIF4A2
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