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BLAST
Target RNA
About
Species
Box type
Target RNA
Organization
all
Aegilops_tauschii
Arabidopsis_thaliana
Caenorhabditis_elegans
Canis_familiaris
Cavia_porcellus
Ciona_intestinalis
Ciona_savignyi
Danio_rerio
Dasypus_novemcinctus
Drosophila_melanogaster
Echinops_telfairi
Equus_caballus
Erinaceus_europaeus
Felis_catus
Gallus_gallus
Gasterosteus_aculeatus
Gorilla_gorilla
Homo_sapiens
Hordeum_vulgare
Loxodonta_africana
Macaca_mulatta
Microcebus_murinus
Monodelphis_domestica
Mus_musculus
Myotis_lucifugus
Ornithorhynchus_anatinus
Oryctolagus_cuniculus
Oryza_sativa
Oryzias_latipes
Otolemur_garnettii
Pan_troglodytes
Physcomitrium_patens
Pongo_pygmaeus
Rattus_norvegicus
Saccharomyces_cerevisiae
Schizosaccharomyces_pombe
Sorex_araneus
Spermophilus_tridecemlineatus
Tetraodon_nigroviridis
Triticum_aestivum
Triticum_dicoccoides
Tupaia_belangeri
Xenopus_tropicalis
all
C/D
H/ACA
unknown
all
18S rRNA
28S rRNA
5.8S rRNA
U3 snoRNA
U4 snRNA
18S rRNA
18S rRNA
18SrRNA
25S rRNA
25S rRNA
25SrRNA
26S rRNA
28S rRN
28S rRNA
5'External Transcribed Spacer (ETS)
5.8S rRNA
?28S rRNA
Nonfunctional
U1 snRNA
U12 snRNA
U2 snRNA
U3
U3 snoRNA
U4 snRNA
U5 snRNA
U6 snRNA
Unknown
5.8S rRNA
all
Intronic
Mono
Poly
Keywords
Curation status
Locus View
all
curated
Species
snoRNA name
Box
Target RNA
Organization
Locus
Arabidopsis_thaliana
SnoR5a
H/ACA
18S rRNA
Poly
poly:U31a
Arabidopsis_thaliana
SnoR5b
H/ACA
18S rRNA
Poly
poly:U31b
Arabidopsis_thaliana
SnoR72
H/ACA
18S rRNA
Intronic
RPL32B
Arabidopsis_thaliana
SnoR72-2
H/ACA
18S rRNA
Intronic
resistance protein (TIR-NBS-LRR class)
Arabidopsis_thaliana
SnoR72-3
H/ACA
18S rRNA
Mono
Mono:SnoR72-3
Caenorhabditis_elegans
CeSSU-970 (CeN64)
H/ACA
18S rRNA,26S rRNA
Intronic
C05D2.6
Canis_familiaris
SNORA8
H/ACA
Intronic
ENSCAFG00000004233
Cavia_porcellus
SNORA8
H/ACA
Mono
Mono:687:SNORA8
Cavia_porcellus
SNORA8
H/ACA
Poly
Poly:7:SNORA8
Dasypus_novemcinctus
SNORA8
H/ACA
Mono
Mono:110:SNORA8
Dasypus_novemcinctus
SNORA8
H/ACA
Mono
Mono:125:SNORA8
Dasypus_novemcinctus
SNORA8
H/ACA
Mono
Mono:205:SNORA8
Dasypus_novemcinctus
SNORA8
H/ACA
Mono
Mono:368:SNORA8
Dasypus_novemcinctus
SNORA8
H/ACA
Mono
Mono:394:SNORA8
Dasypus_novemcinctus
SNORA8
H/ACA
Mono
Mono:406:SNORA8
Dasypus_novemcinctus
SNORA8
H/ACA
Intronic
PHTF1
Dasypus_novemcinctus
SNORA8
H/ACA
Poly
Poly:16:SNORA32
Drosophila_melanogaster
snoRNA:Psi18S-1086
H/ACA
18S rRNA
Intronic
CG13900
Echinops_telfairi
SNORA8
H/ACA
Mono
Mono:375:SNORA8
Echinops_telfairi
SNORA8
H/ACA
Mono
Mono:415:SNORA8
Echinops_telfairi
SNORA8
H/ACA
Mono
Mono:620:SNORA8
Echinops_telfairi
SNORA8
H/ACA
Poly
Poly:7:SNORA32
Equus_caballus
SNORA8
H/ACA
Poly
Poly:8:SNORA40
Erinaceus_europaeus
SNORA8
H/ACA
Poly
Poly:6:SNORA48
Gallus_gallus
SNORA8
H/ACA
Poly
Poly:0:SNORA8
Gasterosteus_aculeatus
SNORA8
H/ACA
Poly
Poly:9:SNORA18
Gasterosteus_aculeatus
SNORA8
H/ACA
Poly
Poly:9:SNORA18
Gorilla_gorilla
SNORA8
H/ACA
mono
Mono:200:SNORA8
Gorilla_gorilla
SNORA8
H/ACA
mono
Mono:364:SNORA8
Gorilla_gorilla
SNORA8
H/ACA
18S rRNA
mono
Mono:396:SNORA8
Gorilla_gorilla
SNORA8
unknown
mono
Mono:397:SNORA8
Gorilla_gorilla
SNORA8
H/ACA
18S rRNA
Intronic
TAF1D
Homo_sapiens
SNORA8 (ACA8)
H/ACA
18S rRNA,28S rRNA
Intronic
JOSD3
Loxodonta_africana
SNORA8
H/ACA
Poly
Poly:29:SNORA1
Macaca_mulatta
SNORA8
H/ACA
Intronic
JOSD3
Macaca_mulatta
SNORA8
H/ACA
Mono
Mono:241:SNORA8
Microcebus_murinus
SNORA8
H/ACA
Mono
Mono:106:SNORA8
Microcebus_murinus
SNORA8
H/ACA
Poly
Poly:0:SNORA25
Monodelphis_domestica
SNORA8
H/ACA
Poly
Poly:9:SNORA40
Mus_musculus
SNORA8 (ACA8)
H/ACA
18S rRNA,28S rRNA
Intronic
Eng
Mus_musculus
SNORA8 (ACA8)
H/ACA
18S rRNA,28S rRNA
Poly
Poly:9:SNORA40
Myotis_lucifugus
SNORA8
H/ACA
18S rRNA
Mono
Mono:237:SNORA8
Myotis_lucifugus
SNORA8
H/ACA
18S rRNA
Mono
Mono:41:SNORA8
Myotis_lucifugus
SNORA8
H/ACA
18S rRNA
Mono
Mono:42:SNORA8
Myotis_lucifugus
SNORA8
H/ACA
18S rRNA
Mono
Mono:446:SNORA8
Myotis_lucifugus
SNORA8
H/ACA
18S rRNA
Mono
Mono:48:SNORA8
Myotis_lucifugus
SNORA8
H/ACA
18S rRNA
Mono
Mono:534:SNORA8
Myotis_lucifugus
SNORA8
H/ACA
18S rRNA
Mono
Mono:76:SNORA8
Myotis_lucifugus
SNORA8
H/ACA
18S rRNA
Intronic
TAF1D
Ornithorhynchus_anatinus
SNORA8
H/ACA
Poly
Poly:SNORA40
Oryctolagus_cuniculus
SNORA8
H/ACA
Mono
Mono:164:SNORA8
Oryctolagus_cuniculus
SNORA8
H/ACA
Poly
Poly:12:SNORA25
Otolemur_garnettii
SNORA8
H/ACA
Mono
Mono:112:SNORA8
Otolemur_garnettii
SNORA8
H/ACA
Mono
Mono:355:SNORA8
Otolemur_garnettii
SNORA8
H/ACA
Poly
Poly:17:SNORA25
Pan_troglodytes
SNORA8
H/ACA
Intronic
JOSD3
Pan_troglodytes
SNORA8
H/ACA
Mono
Mono:157:SNORA8
Pan_troglodytes
SNORA8
H/ACA
Mono
Mono:7:SNORA8
Pan_troglodytes
SNORA8
H/ACA
Mono
Mono:8:SNORA8
Pongo_pygmaeus
SNORA8
H/ACA
Mono
Mono:188:SNORA8
Pongo_pygmaeus
SNORA8
H/ACA
Mono
Mono:189:SNORA8
Pongo_pygmaeus
SNORA8
H/ACA
Mono
Mono:331:SNORA8
Pongo_pygmaeus
SNORA8
H/ACA
Mono
Mono:65:SNORA8
Pongo_pygmaeus
SNORA8
H/ACA
Poly
Poly:21:SNORA25
Rattus_norvegicus
SNORA8
H/ACA
Intronic
Josd3
Rattus_norvegicus
SNORA8
H/ACA
Mono
Mono:118:SNORA8
Rattus_norvegicus
SNORA8
H/ACA
Mono
Mono:161:SNORA8
Rattus_norvegicus
SNORA8
H/ACA
Mono
Mono:566:SNORA8
Rattus_norvegicus
SNORA8
H/ACA
Mono
Mono:619:SNORA8
Rattus_norvegicus
SNORA8
H/ACA
Intronic
Rab8b
Saccharomyces_cerevisiae
snR31
H/ACA
18S rRNA
Mono
Mono:43:snR31
Saccharomyces_cerevisiae
snR82 (RUF2)
H/ACA
25S rRNA
Mono
Mono:14:snR82
Sorex_araneus
SNORA8
H/ACA
Mono
Mono:303:SNORA8
Spermophilus_tridecemlineatus
SNORA8
H/ACA
Intronic
AP2B1
Spermophilus_tridecemlineatus
SNORA8
H/ACA
Mono
Mono:82:SNORA8
Tetraodon_nigroviridis
SNORA8
H/ACA
18S rRNA,28S rRNA
Mono
Mono:SNORA8
Tupaia_belangeri
SNORA8
H/ACA
Poly
Poly:16:SNORA25
Xenopus_tropicalis
SNORA8
H/ACA
Poly
Poly:1:SNORA8
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