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BLAST
Target RNA
About
Species
Box type
Target RNA
Organization
all
Aegilops_tauschii
Arabidopsis_thaliana
Caenorhabditis_elegans
Canis_familiaris
Cavia_porcellus
Ciona_intestinalis
Ciona_savignyi
Danio_rerio
Dasypus_novemcinctus
Drosophila_melanogaster
Echinops_telfairi
Equus_caballus
Erinaceus_europaeus
Felis_catus
Gallus_gallus
Gasterosteus_aculeatus
Gorilla_gorilla
Homo_sapiens
Hordeum_vulgare
Loxodonta_africana
Macaca_mulatta
Microcebus_murinus
Monodelphis_domestica
Mus_musculus
Myotis_lucifugus
Ornithorhynchus_anatinus
Oryctolagus_cuniculus
Oryza_sativa
Oryzias_latipes
Otolemur_garnettii
Pan_troglodytes
Physcomitrium_patens
Pongo_pygmaeus
Rattus_norvegicus
Saccharomyces_cerevisiae
Schizosaccharomyces_pombe
Sorex_araneus
Spermophilus_tridecemlineatus
Tetraodon_nigroviridis
Triticum_aestivum
Triticum_dicoccoides
Tupaia_belangeri
Xenopus_tropicalis
all
C/D
H/ACA
unknown
all
18S rRNA
28S rRNA
5.8S rRNA
U3 snoRNA
U4 snRNA
18S rRNA
18S rRNA
18SrRNA
25S rRNA
25S rRNA
25SrRNA
26S rRNA
28S rRN
28S rRNA
5'External Transcribed Spacer (ETS)
5.8S rRNA
?28S rRNA
Nonfunctional
U1 snRNA
U12 snRNA
U2 snRNA
U3
U3 snoRNA
U4 snRNA
U5 snRNA
U6 snRNA
Unknown
5.8S rRNA
all
Intronic
Mono
Poly
Keywords
Curation status
Locus View
all
curated
Species
snoRNA name
Box
Target RNA
Organization
Locus
Arabidopsis_thaliana
U65-1
H/ACA
25S rRNA
Poly
poly:U49-1
Arabidopsis_thaliana
U65-2
H/ACA
25S rRNA
Poly
poly:U49-2
Arabidopsis_thaliana
U65-3
H/ACA
25S rRNA
Poly
poly:U49-3
Caenorhabditis_elegans
C10C6.8 (CeN39)
H/ACA
26S rRNA
Intronic
C10C6.6
Canis_familiaris
SNORA65
H/ACA
Intronic
ENSCAFG00000020136
Canis_familiaris
SNORA65
H/ACA
Mono
Mono:43:SNORA65
Danio_rerio
SNORA65
H/ACA
28S rRNA
Intronic
Rpl12
Danio_rerio
SNORA65
H/ACA
28S rRNA
Intronic
Rpl12
Danio_rerio
SNORA65
H/ACA
28S rRNA
Intronic
Rpl12
Dasypus_novemcinctus
SNORA65
H/ACA
Intronic
ENSDNOG00000008412
Dasypus_novemcinctus
SNORA65
H/ACA
Mono
Mono:114:SNORA65
Dasypus_novemcinctus
SNORA65
H/ACA
Mono
Mono:261:SNORA65
Dasypus_novemcinctus
SNORA65
H/ACA
Mono
Mono:295:SNORA65
Dasypus_novemcinctus
SNORA65
H/ACA
Mono
Mono:8:SNORA65
Drosophila_melanogaster
snoRNA:Psi28S-3342
H/ACA
28S rRNA
Mono
Mono:2:snoRNA:Psi28S-3342
Echinops_telfairi
SNORA65
H/ACA
Intronic
ENSETEG00000006941
Echinops_telfairi
SNORA65
H/ACA
Mono
Mono:102:SNORA65
Echinops_telfairi
SNORA65
H/ACA
Mono
Mono:189:SNORA65
Echinops_telfairi
SNORA65
H/ACA
Mono
Mono:200:SNORA65
Echinops_telfairi
SNORA65
H/ACA
Mono
Mono:239:SNORA65
Echinops_telfairi
SNORA65
H/ACA
Mono
Mono:265:SNORA65
Echinops_telfairi
SNORA65
H/ACA
Mono
Mono:614:SNORA65
Echinops_telfairi
SNORA65
H/ACA
Mono
Mono:630:SNORA65
Echinops_telfairi
SNORA65
H/ACA
Mono
Mono:98:SNORA65
Equus_caballus
SNORA65
H/ACA
Intronic
ENSECAG00000010622
Erinaceus_europaeus
SNORA65
H/ACA
Mono
Mono:245:SNORA65
Felis_catus
SNORA65
H/ACA
Mono
Mono:56:SNORA65
Gorilla_gorilla
SNORA65
H/ACA
28S rRNA
Intronic
RPL12
Homo_sapiens
SNORA65 (U65)
H/ACA
28S rRNA
Intronic
RPL12
Loxodonta_africana
SNORA65
H/ACA
Intronic
ENSLAFG00000017669
Loxodonta_africana
SNORA65
H/ACA
Mono
Mono:91:SNORA65
Macaca_mulatta
SNORA65
H/ACA
Intronic
RPL12
Microcebus_murinus
SNORA65
H/ACA
Intronic
ENSMICG00000002326
Monodelphis_domestica
SNORA65
H/ACA
Intronic
ENSMODG00000004571
Mus_musculus
SNORA65 (U65)
H/ACA
28S rRNA
Mono
Mono:145:SNORA65
Mus_musculus
SNORA65 (U65)
H/ACA
28S rRNA
Mono
Mono:15:SNORA65
Mus_musculus
SNORA65 (U65)
H/ACA
28S rRNA
Mono
Mono:177:SNORA65
Mus_musculus
SNORA65 (U65)
H/ACA
28S rRNA
Mono
Mono:394:SNORA65
Mus_musculus
SNORA65 (U65)
H/ACA
28S rRNA
Mono
Mono:423:SNORA65
Mus_musculus
SNORA65 (U65)
H/ACA
28S rRNA
Intronic
Rpl12
Myotis_lucifugus
SNORA65
H/ACA
28S rRNA
Intronic
LOC102436747
Myotis_lucifugus
SNORA65
H/ACA
28S rRNA
Mono
Mono:242:SNORA65
Ornithorhynchus_anatinus
SNORA65
H/ACA
Mono
Mono:SNORA65
Ornithorhynchus_anatinus
SNORA65
H/ACA
Intronic
RPL12
Ornithorhynchus_anatinus
SNORA65
H/ACA
Intronic
RPL12
Oryctolagus_cuniculus
SNORA65
H/ACA
Intronic
ENSOCUG00000004902
Oryctolagus_cuniculus
SNORA65
H/ACA
Mono
Mono:59:SNORA65
Oryzias_latipes
SNORA65
H/ACA
Intronic
RPL12
Otolemur_garnettii
SNORA65
H/ACA
Intronic
ENSOGAG00000000597
Pan_troglodytes
SNORA65
H/ACA
Intronic
XR_023205.1
Rattus_norvegicus
SNORA65
H/ACA
Intronic
ENSRNOG00000016220
Saccharomyces_cerevisiae
snR34
H/ACA
25S rRNA
Mono
Mono:30:snR34
Sorex_araneus
SNORA65
H/ACA
Intronic
ENSSARG00000010880
Sorex_araneus
SNORA65
H/ACA
Poly
Poly:15:SNORA58
Tetraodon_nigroviridis
SNORA65
H/ACA
28S rRNA
Intronic
rpl12
Tetraodon_nigroviridis
SNORA65
H/ACA
28S rRNA
Intronic
rpl12
Tupaia_belangeri
SNORA65
H/ACA
Intronic
ENSTBEG00000006304
Tupaia_belangeri
SNORA65
H/ACA
Mono
Mono:178:SNORA65
Tupaia_belangeri
SNORA65
H/ACA
Mono
Mono:25:SNORA65
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