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BLAST
Target RNA
About
Species
Box type
Target RNA
Organization
all
Aegilops_tauschii
Arabidopsis_thaliana
Caenorhabditis_elegans
Canis_familiaris
Cavia_porcellus
Ciona_intestinalis
Ciona_savignyi
Danio_rerio
Dasypus_novemcinctus
Drosophila_melanogaster
Echinops_telfairi
Equus_caballus
Erinaceus_europaeus
Felis_catus
Gallus_gallus
Gasterosteus_aculeatus
Gorilla_gorilla
Homo_sapiens
Hordeum_vulgare
Loxodonta_africana
Macaca_mulatta
Microcebus_murinus
Monodelphis_domestica
Mus_musculus
Myotis_lucifugus
Ornithorhynchus_anatinus
Oryctolagus_cuniculus
Oryza_sativa
Oryzias_latipes
Otolemur_garnettii
Pan_troglodytes
Physcomitrium_patens
Pongo_pygmaeus
Rattus_norvegicus
Saccharomyces_cerevisiae
Schizosaccharomyces_pombe
Sorex_araneus
Spermophilus_tridecemlineatus
Tetraodon_nigroviridis
Triticum_aestivum
Triticum_dicoccoides
Tupaia_belangeri
Xenopus_tropicalis
all
C/D
H/ACA
unknown
all
18S rRNA
28S rRNA
5.8S rRNA
U3 snoRNA
U4 snRNA
18S rRNA
18S rRNA
18SrRNA
25S rRNA
25S rRNA
25SrRNA
26S rRNA
28S rRN
28S rRNA
5'External Transcribed Spacer (ETS)
5.8S rRNA
?28S rRNA
Nonfunctional
U1 snRNA
U12 snRNA
U2 snRNA
U3
U3 snoRNA
U4 snRNA
U5 snRNA
U6 snRNA
Unknown
5.8S rRNA
all
Intronic
Mono
Poly
Keywords
Curation status
Locus View
all
curated
Species
snoRNA name
Box
Target RNA
Organization
Locus
Caenorhabditis_elegans
B0213.18
H/ACA
26S rRNA
Mono
Mono:37:B0213.18
Caenorhabditis_elegans
F28D1.13
H/ACA
26S rRNA
Intronic
rps-23
Caenorhabditis_elegans
R151.11 (CeN100)
H/ACA
26S rRNA
Intronic
rpl-6
Canis_familiaris
SNORA3
H/ACA
Intronic
ENSCAFG00000006936
Canis_familiaris
SNORA3
H/ACA
Intronic
ENSCAFG00000006936
Cavia_porcellus
SNORA3
H/ACA
Mono
Mono:SNORA51
Cavia_porcellus
SNORA3
H/ACA
Mono
Mono:592:SNORA3
Cavia_porcellus
SNORA3
H/ACA
Intronic
RBMS1
Danio_rerio
SNORA3
H/ACA
28S rRNA
Intronic
si:ch73-295i22.2
Danio_rerio
SNORA3
H/ACA
28S rRNA
Intronic
si:ch73-295i22.2
Danio_rerio
SNORA3
H/ACA
28S rRNA
Intronic
si:ch73-295i22.2
Danio_rerio
SNORA3
H/ACA
28S rRNA
Intronic
si:ch73-295i22.2
Dasypus_novemcinctus
SNORA3
H/ACA
Intronic
DAD1
Dasypus_novemcinctus
SNORA3
H/ACA
Intronic
ENSDNOG00000019759
Dasypus_novemcinctus
SNORA3
H/ACA
Mono
Mono:104:SNORA3
Dasypus_novemcinctus
SNORA3
H/ACA
Mono
Mono:225:SNORA3
Dasypus_novemcinctus
SNORA3
H/ACA
Mono
Mono:276:SNORA3
Dasypus_novemcinctus
SNORA3
H/ACA
Mono
Mono:389:SNORA3
Echinops_telfairi
SNORA3
H/ACA
Intronic
ENSETEG00000002169
Echinops_telfairi
SNORA3
H/ACA
Intronic
ENSETEG00000002169
Echinops_telfairi
SNORA3
H/ACA
Mono
Mono:13:SNORA3
Echinops_telfairi
SNORA3
H/ACA
Mono
Mono:138:SNORA3
Echinops_telfairi
SNORA3
H/ACA
Mono
Mono:303:SNORA3
Echinops_telfairi
SNORA3
H/ACA
Mono
Mono:365:SNORA3
Echinops_telfairi
SNORA3
H/ACA
Mono
Mono:442:SNORA3
Echinops_telfairi
SNORA3
H/ACA
Mono
Mono:497:SNORA3
Echinops_telfairi
SNORA3
H/ACA
Mono
Mono:55:SNORA3
Echinops_telfairi
SNORA3
H/ACA
Mono
Mono:75:SNORA3
Equus_caballus
SNORA3
H/ACA
Mono
Mono:5:SNORA3
Equus_caballus
SNORA3
H/ACA
Intronic
RPL27A
Equus_caballus
SNORA3
H/ACA
Intronic
RPL27A
Erinaceus_europaeus
SNORA3
H/ACA
Intronic
BCL6
Erinaceus_europaeus
SNORA3
H/ACA
Intronic
C15orf42
Erinaceus_europaeus
SNORA3
H/ACA
Intronic
DNMT3B
Erinaceus_europaeus
SNORA3
H/ACA
Intronic
EED
Erinaceus_europaeus
SNORA3
H/ACA
Mono
Mono:123:SNORA3
Erinaceus_europaeus
SNORA3
H/ACA
Mono
Mono:13:SNORA3
Erinaceus_europaeus
SNORA3
H/ACA
Mono
Mono:142:SNORA3
Erinaceus_europaeus
SNORA3
H/ACA
Mono
Mono:182:SNORA3
Erinaceus_europaeus
SNORA3
H/ACA
Mono
Mono:213:SNORA3
Erinaceus_europaeus
SNORA3
H/ACA
Mono
Mono:248:SNORA3
Erinaceus_europaeus
SNORA3
H/ACA
Mono
Mono:25:SNORA3
Erinaceus_europaeus
SNORA3
H/ACA
Mono
Mono:257:SNORA3
Erinaceus_europaeus
SNORA3
H/ACA
Mono
Mono:277:SNORA3
Erinaceus_europaeus
SNORA3
H/ACA
Mono
Mono:281:SNORA3
Erinaceus_europaeus
SNORA3
H/ACA
Mono
Mono:410:SNORA3
Erinaceus_europaeus
SNORA3
H/ACA
Mono
Mono:480:SNORA3
Erinaceus_europaeus
SNORA3
H/ACA
Mono
Mono:488:SNORA3
Erinaceus_europaeus
SNORA3
H/ACA
Mono
Mono:489:SNORA3
Erinaceus_europaeus
SNORA3
H/ACA
Mono
Mono:499:SNORA3
Erinaceus_europaeus
SNORA3
H/ACA
Mono
Mono:51:SNORA3
Erinaceus_europaeus
SNORA3
H/ACA
Mono
Mono:67:SNORA3
Erinaceus_europaeus
SNORA3
H/ACA
Mono
Mono:8:SNORA3
Erinaceus_europaeus
SNORA3
H/ACA
Intronic
NAT12
Gasterosteus_aculeatus
SNORA3
H/ACA
Intronic
RPL27A
Gasterosteus_aculeatus
SNORA3
H/ACA
Intronic
RPS5
Gasterosteus_aculeatus
SNORA3
H/ACA
Intronic
RPS5
Homo_sapiens
SNORA3 (ACA3)
H/ACA
28S rRNA
Intronic
RPL27A
Homo_sapiens
SNORA45 (ACA3-2)
H/ACA
28S rRNA
Intronic
RPL27A
Loxodonta_africana
SNORA3
H/ACA
Intronic
ENSLAFG00000000425
Macaca_mulatta
SNORA3
H/ACA
Intronic
ENSMMUG00000021828
Macaca_mulatta
SNORA3
H/ACA
Intronic
ENSMMUG00000021828
Macaca_mulatta
SNORA3
H/ACA
Mono
Mono:159:SNORA3
Macaca_mulatta
SNORA3
H/ACA
Mono
Mono:195:SNORA3
Macaca_mulatta
SNORA3
H/ACA
Mono
Mono:244:SNORA3
Macaca_mulatta
SNORA3
H/ACA
Mono
Mono:326:SNORA3
Microcebus_murinus
SNORA3
H/ACA
Intronic
KIF18A
Microcebus_murinus
SNORA3
H/ACA
Mono
Mono:120:SNORA3
Microcebus_murinus
SNORA3
H/ACA
Mono
Mono:172:SNORA3
Microcebus_murinus
SNORA3
H/ACA
Mono
Mono:284:SNORA3
Microcebus_murinus
SNORA3
H/ACA
Mono
Mono:47:SNORA3
Microcebus_murinus
SNORA3
H/ACA
Intronic
RPL27A
Microcebus_murinus
SNORA3
H/ACA
Intronic
RPL27A
Monodelphis_domestica
SNORA3
H/ACA
Intronic
ENSMODG00000007480
Monodelphis_domestica
SNORA3
H/ACA
Intronic
ENSMODG00000007480
Mus_musculus
SNORA3 (ACA3)
H/ACA
28S rRNA
Intronic
D8Ertd457e
Mus_musculus
SNORA3 (ACA3)
H/ACA
28S rRNA
Mono
Mono:405:SNORA3
Mus_musculus
SNORA3 (ACA3-2)
H/ACA
28S rRNA
Mono
Mono:45:SNORA3
Mus_musculus
SNORA3 (ACA3)
H/ACA
28S rRNA
Intronic
Rpl27a
Mus_musculus
SNORA3 (ACA3)
H/ACA
28S rRNA
Intronic
Rpl27a
Myotis_lucifugus
SNORA3
H/ACA
28S rRNA
Mono
Mono:303:SNORA3
Myotis_lucifugus
SNORA3
H/ACA
Mono
Mono:44:SNORA3
Myotis_lucifugus
SNORA3
H/ACA
28S rRNA
Mono
Mono:47:SNORA3
Myotis_lucifugus
SNORA3
H/ACA
28S rRNA
Mono
Mono:556:SNORA3
Myotis_lucifugus
SNORA3
H/ACA
28S rRNA
Mono
Mono:557:SNORA3
Myotis_lucifugus
SNORA3
H/ACA
28S rRNA
Intronic
RPL27A
Myotis_lucifugus
SNORA3
H/ACA
28S rRNA
Intronic
RPL27A
Ornithorhynchus_anatinus
SNORA3
H/ACA
Intronic
RPL27A
Ornithorhynchus_anatinus
SNORA3
H/ACA
Intronic
ENSOANG00000006440
Ornithorhynchus_anatinus
SNORA3
H/ACA
Intronic
ENSOANG00000006440
Oryctolagus_cuniculus
SNORA3
H/ACA
Intronic
ENSOCUG00000005442
Oryctolagus_cuniculus
SNORA3
H/ACA
Intronic
ENSOCUG00000005442
Oryctolagus_cuniculus
SNORA3
H/ACA
Mono
Mono:50:SNORA3
Oryctolagus_cuniculus
SNORA3
H/ACA
Mono
Mono:85:SNORA3
Oryzias_latipes
SNORA3
H/ACA
Intronic
RPS5
Otolemur_garnettii
SNORA3
H/ACA
Intronic
DLG2
Otolemur_garnettii
SNORA3
H/ACA
Intronic
ENSOGAG00000012353
Otolemur_garnettii
SNORA3
H/ACA
Mono
Mono:421:SNORA3
Otolemur_garnettii
SNORA3
H/ACA
Mono
Mono:494:SNORA3
Otolemur_garnettii
SNORA3
H/ACA
Mono
Mono:511:SNORA3
Otolemur_garnettii
SNORA3
H/ACA
Intronic
PDE4D
Pan_troglodytes
SNORA3
H/ACA
Mono
Mono:110:SNORA3
Pan_troglodytes
SNORA3
H/ACA
Mono
Mono:131:SNORA3
Pan_troglodytes
SNORA3
H/ACA
Mono
Mono:221:SNORA3
Pan_troglodytes
SNORA3
H/ACA
Intronic
RL27A_PANTR
Pan_troglodytes
SNORA3
H/ACA
Intronic
RL27A_PANTR
Pongo_pygmaeus
SNORA3
H/ACA
Mono
Mono:113:SNORA3
Pongo_pygmaeus
SNORA3
H/ACA
Mono
Mono:214:SNORA3
Pongo_pygmaeus
SNORA3
H/ACA
Mono
Mono:268:SNORA3
Pongo_pygmaeus
SNORA3
H/ACA
Mono
Mono:85:SNORA3
Pongo_pygmaeus
SNORA3
H/ACA
Poly
Poly:20:SNORA3
Pongo_pygmaeus
SNORA3
H/ACA
Poly
Poly:20:SNORA3
Rattus_norvegicus
SNORA3
H/ACA
Mono
Mono:200:SNORA3
Rattus_norvegicus
SNORA3
H/ACA
Mono
Mono:75:SNORA3
Rattus_norvegicus
SNORA3
H/ACA
Intronic
NP_001101577.1
Rattus_norvegicus
SNORA3
H/ACA
Intronic
RL27A_RAT
Rattus_norvegicus
SNORA3
H/ACA
Intronic
RL27A_RAT
Saccharomyces_cerevisiae
snR11
H/ACA
25S rRNA
Mono
Mono:33:snR11
Sorex_araneus
SNORA3
H/ACA
Mono
Mono:280:SNORA3
Sorex_araneus
SNORA3
H/ACA
Mono
Mono:389:SNORA3
Sorex_araneus
SNORA3
H/ACA
Mono
Mono:541:SNORA3
Sorex_araneus
SNORA3
H/ACA
Mono
Mono:80:SNORA3
Sorex_araneus
SNORA3
H/ACA
Intronic
RPL27A
Sorex_araneus
SNORA3
H/ACA
Intronic
RPL27A
Spermophilus_tridecemlineatus
SNORA3
H/ACA
Mono
Mono:100:SNORA3
Spermophilus_tridecemlineatus
SNORA3
H/ACA
Mono
Mono:51:SNORA3
Spermophilus_tridecemlineatus
SNORA3
H/ACA
Mono
Mono:59:SNORA3
Spermophilus_tridecemlineatus
SNORA3
H/ACA
Intronic
RBMS1
Tetraodon_nigroviridis
SNORA3
H/ACA
28S rRNA
Intronic
rps5
Tetraodon_nigroviridis
SNORA3
H/ACA
28S rRNA
Intronic
rps5
Tupaia_belangeri
SNORA3
H/ACA
Intronic
ENSTBEG00000000046
Tupaia_belangeri
SNORA3
H/ACA
Intronic
ENSTBEG00000000046
Tupaia_belangeri
SNORA3
H/ACA
Mono
Mono:156:SNORA3
Tupaia_belangeri
SNORA3
H/ACA
Mono
Mono:207:SNORA3
Tupaia_belangeri
SNORA3
H/ACA
Mono
Mono:78:SNORA3
Xenopus_tropicalis
SNORA3
H/ACA
Intronic
ENSXETG00000003912
Xenopus_tropicalis
SNORA3
H/ACA
Mono
Mono:21:SNORA3
Xenopus_tropicalis
SNORA3
H/ACA
Mono
Mono:9:SNORA3
Xenopus_tropicalis
SNORA3
H/ACA
Poly
Poly:10:SNORA3
Xenopus_tropicalis
SNORA3
H/ACA
Poly
Poly:10:SNORA3
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