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BLAST
Target RNA
About
Species
Box type
Target RNA
Organization
all
Aegilops_tauschii
Arabidopsis_thaliana
Caenorhabditis_elegans
Canis_familiaris
Cavia_porcellus
Ciona_intestinalis
Ciona_savignyi
Danio_rerio
Dasypus_novemcinctus
Drosophila_melanogaster
Echinops_telfairi
Equus_caballus
Erinaceus_europaeus
Felis_catus
Gallus_gallus
Gasterosteus_aculeatus
Gorilla_gorilla
Homo_sapiens
Hordeum_vulgare
Loxodonta_africana
Macaca_mulatta
Microcebus_murinus
Monodelphis_domestica
Mus_musculus
Myotis_lucifugus
Ornithorhynchus_anatinus
Oryctolagus_cuniculus
Oryza_sativa
Oryzias_latipes
Otolemur_garnettii
Pan_troglodytes
Physcomitrium_patens
Pongo_pygmaeus
Rattus_norvegicus
Saccharomyces_cerevisiae
Schizosaccharomyces_pombe
Sorex_araneus
Spermophilus_tridecemlineatus
Tetraodon_nigroviridis
Triticum_aestivum
Triticum_dicoccoides
Tupaia_belangeri
Xenopus_tropicalis
all
C/D
H/ACA
unknown
all
18S rRNA
28S rRNA
5.8S rRNA
U3 snoRNA
U4 snRNA
18S rRNA
18S rRNA
18SrRNA
25S rRNA
25S rRNA
25SrRNA
26S rRNA
28S rRN
28S rRNA
5'External Transcribed Spacer (ETS)
5.8S rRNA
?28S rRNA
Nonfunctional
U1 snRNA
U12 snRNA
U2 snRNA
U3
U3 snoRNA
U4 snRNA
U5 snRNA
U6 snRNA
Unknown
5.8S rRNA
all
Intronic
Mono
Poly
Keywords
Curation status
Locus View
all
curated
Species
snoRNA name
Box
Target RNA
Organization
Locus
Caenorhabditis_elegans
B0412.7 (CeN110)
H/ACA
18S rRNA,26S rRNA
Intronic
rps-29
Caenorhabditis_elegans
W08G11.6 (CeN41)
H/ACA
18S rRNA,26S rRNA
Intronic
W08G11.3
Canis_familiaris
SNORA16
H/ACA
28S rRNA
Mono
Mono:65:SNORA16
Canis_familiaris
SNORA16
H/ACA
28S rRNA
Poly
Poly:18:SNORA16
Cavia_porcellus
SNORA16
H/ACA
Mono
Mono:SNORA16
Cavia_porcellus
SNORA16
H/ACA
Mono
Mono:270:SNORA16
Cavia_porcellus
SNORA16
H/ACA
Mono
Mono:289:SNORA16
Cavia_porcellus
SNORA16
H/ACA
Mono
Mono:355:SNORA16
Cavia_porcellus
SNORA16
H/ACA
Poly
Poly:21:SNORD99
Danio_rerio
SNORA16
H/ACA
28S rRNA
Intronic
LOC100535315
Danio_rerio
SNORA16
H/ACA
28S rRNA
Intronic
LOC100535315
Dasypus_novemcinctus
SNORA16
H/ACA
Mono
Mono:13:SNORA16
Dasypus_novemcinctus
SNORA16
H/ACA
Mono
Mono:192:SNORA16
Dasypus_novemcinctus
SNORA16
H/ACA
Mono
Mono:211:SNORA16
Dasypus_novemcinctus
SNORA16
H/ACA
Mono
Mono:310:SNORA16
Dasypus_novemcinctus
SNORA16
H/ACA
Mono
Mono:318:SNORA16
Dasypus_novemcinctus
SNORA16
H/ACA
Mono
Mono:407:SNORA16
Dasypus_novemcinctus
SNORA16
H/ACA
Mono
Mono:83:SNORA16
Dasypus_novemcinctus
SNORA16
H/ACA
Poly
Poly:14:SNORA16
Dasypus_novemcinctus
SNORA16
H/ACA
Poly
Poly:14:SNORA16
Drosophila_melanogaster
snoRNA:Psi28S-3327a
H/ACA
28S rRNA
Intronic
RpS4
Drosophila_melanogaster
snoRNA:Psi28S-3327b
H/ACA
28S rRNA
Intronic
RpS4
Drosophila_melanogaster
snoRNA:Psi28S-3327c
H/ACA
28S rRNA
Intronic
RpS4
Echinops_telfairi
SNORA16
H/ACA
Intronic
ENSETEG00000012624
Echinops_telfairi
SNORA16
H/ACA
Intronic
FANCD2
Echinops_telfairi
SNORA16
H/ACA
Mono
Mono:104:SNORA16
Echinops_telfairi
SNORA16
H/ACA
Mono
Mono:122:SNORA16
Echinops_telfairi
SNORA16
H/ACA
Mono
Mono:387:SNORA16
Echinops_telfairi
SNORA16
H/ACA
Mono
Mono:439:SNORA16
Echinops_telfairi
SNORA16
H/ACA
Mono
Mono:465:SNORA16
Equus_caballus
SNORA16
H/ACA
Mono
Mono:57:SNORA16
Equus_caballus
SNORA16
H/ACA
Poly
Poly:6:SNORA16
Erinaceus_europaeus
SNORA16
H/ACA
Mono
Mono:190:SNORA16
Erinaceus_europaeus
SNORA16
H/ACA
Mono
Mono:381:SNORA16
Erinaceus_europaeus
SNORA16
H/ACA
Mono
Mono:7:SNORA16
Homo_sapiens
SNORA16 (ACA16)
H/ACA
28S rRNA
Intronic
C1orf79
Homo_sapiens
SNORA16B (U98b)
H/ACA
Unknown
Intronic
PPP2R5A
Loxodonta_africana
SNORA16
H/ACA
Mono
Mono:43:SNORA16
Macaca_mulatta
SNORA16
H/ACA
Intronic
ENSMMUG00000029762
Macaca_mulatta
SNORA16
H/ACA
Mono
Mono:231:SNORA16
Macaca_mulatta
SNORA16
H/ACA
Intronic
N4BP2L1
Macaca_mulatta
SNORA16
H/ACA
Poly
Poly:11:SNORD99
Macaca_mulatta
SNORA16
H/ACA
Intronic
PPP2R5A
Microcebus_murinus
SNORA16
H/ACA
Intronic
ARHGEF4
Microcebus_murinus
SNORA16
H/ACA
Intronic
C14orf45
Microcebus_murinus
SNORA16
H/ACA
Mono
Mono:171:SNORA16
Microcebus_murinus
SNORA16
H/ACA
Mono
Mono:255:SNORA16
Microcebus_murinus
SNORA16
H/ACA
Mono
Mono:276:SNORA16
Microcebus_murinus
SNORA16
H/ACA
Mono
Mono:42:SNORA16
Microcebus_murinus
SNORA16
H/ACA
Poly
Poly:16:SNORA61
Monodelphis_domestica
SNORA16
H/ACA
Poly
Poly:12:SNORD99
Mus_musculus
SNORA16 (ACA16)
H/ACA
28S rRNA
Mono
Mono:205:SNORA16
Mus_musculus
SNORA16 (ACA16)
H/ACA
28S rRNA
Poly
Poly:15:SNORA16
Myotis_lucifugus
SNORA16
H/ACA
Mono
Mono:17:SNORA16
Myotis_lucifugus
SNORA16
H/ACA
Mono
Mono:353:SNORA16
Myotis_lucifugus
SNORA16
H/ACA
28S rRNA
Mono
Mono:369:SNORA16
Myotis_lucifugus
SNORA16
H/ACA
Mono
Mono:514:SNORA16
Myotis_lucifugus
SNORA16
H/ACA
28S rRNA
Mono
Mono:533:SNORA16
Myotis_lucifugus
SNORA16
H/ACA
28S rRNA
Intronic
NBEA
Myotis_lucifugus
SNORA16
H/ACA
28S rRNA
Poly
Poly:5:SNORA44
Oryctolagus_cuniculus
SNORA16
H/ACA
Mono
Mono:106:SNORA16
Oryctolagus_cuniculus
SNORA16
H/ACA
Mono
Mono:68:SNORA16
Oryctolagus_cuniculus
SNORA16
H/ACA
Intronic
N4BP2L1
Otolemur_garnettii
SNORA16
H/ACA
Intronic
ENSOGAG00000015511
Otolemur_garnettii
SNORA16
H/ACA
Mono
Mono:176:SNORA16
Otolemur_garnettii
SNORA16
H/ACA
Mono
Mono:283:SNORA16
Otolemur_garnettii
SNORA16
H/ACA
Mono
Mono:3:SNORA16
Otolemur_garnettii
SNORA16
H/ACA
Mono
Mono:394:SNORA16
Otolemur_garnettii
SNORA16
H/ACA
Mono
Mono:425:SNORA16
Otolemur_garnettii
SNORA16
H/ACA
Mono
Mono:68:SNORA16
Otolemur_garnettii
SNORA16
H/ACA
Poly
Poly:14:SNORA44
Otolemur_garnettii
SNORA16
H/ACA
Intronic
YIPF1
Pan_troglodytes
SNORA16
H/ACA
Intronic
C1orf79
Pan_troglodytes
SNORA16
H/ACA
Mono
Mono:25:SNORA16
Pan_troglodytes
SNORA16
H/ACA
Intronic
N4BP2L1
Pan_troglodytes
SNORA16
H/ACA
Intronic
PPP2R5A
Pongo_pygmaeus
SNORA16
H/ACA
Intronic
C1orf79
Pongo_pygmaeus
SNORA16
H/ACA
Mono
Mono:50:SNORA16
Pongo_pygmaeus
SNORA16
H/ACA
Intronic
N4BP2L1
Pongo_pygmaeus
SNORA16
H/ACA
Intronic
PPP2R5A
Rattus_norvegicus
SNORA16
H/ACA
Mono
Mono:22:SNORA16
Saccharomyces_cerevisiae
snR46
H/ACA
25S rRNA
Mono
Mono:17:snR46
Sorex_araneus
SNORA16
H/ACA
Mono
Mono:586:SNORA16
Sorex_araneus
SNORA16
H/ACA
Mono
Mono:612:SNORA16
Sorex_araneus
SNORA16
H/ACA
Mono
Mono:623:SNORA16
Sorex_araneus
SNORA16
H/ACA
Mono
Mono:847:SNORA16
Spermophilus_tridecemlineatus
SNORA16
H/ACA
Mono
Mono:155:SNORA16
Tetraodon_nigroviridis
snopsi28S-3327
H/ACA
28S rRNA
Poly
Poly:SNORD99
Tupaia_belangeri
SNORA16
H/ACA
Mono
Mono:12:SNORA16
Tupaia_belangeri
SNORA16
H/ACA
Mono
Mono:157:SNORA16
Tupaia_belangeri
SNORA16
H/ACA
Mono
Mono:172:SNORA16
Tupaia_belangeri
SNORA16
H/ACA
Mono
Mono:175:SNORA16
Tupaia_belangeri
SNORA16
H/ACA
Mono
Mono:190:SNORA16
Tupaia_belangeri
SNORA16
H/ACA
Mono
Mono:31:SNORA16
Tupaia_belangeri
SNORA16
H/ACA
Mono
Mono:58:SNORA16
Tupaia_belangeri
SNORA16
H/ACA
Intronic
THSD7A
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