snOPY snoRNA Orthological Gene Database

Family: snoZ118

CLUSTAL W (1.83) multiple sequence alignment C_familiaris300342 ---TGCTCTGATGAA-ATCAC-------TTATAGGAAGTGCCGTCAGAAG C_porcellus300566 ---TGCTCTGATGATTACTAGTA----AT---AGGAAATGCCATCAGAAG C_porcellus300741 ---TGCTCTGATGAT-ATCAC-------TGACA----------------- C_porcellus300951 ---TGTTGTGATGATAACGA-------GTAATAGGAAGTGCCGTCAGAAG C_porcellus300952 ---TGCTCTGATGAT-ACCAC------TTAATAGGAAGTGCCGTCAGAAT D_rerio300029 ---TTCTGTGATGAAAA-CGC------TATATAGGAAGTGCCGTCTGATG D_rerio300030 ---TTCTGTGATGAAAA-CGC------TATATAGGAAGTGCCGTCTGATG D_novemcinctus300184 ---TGCTCTGATGAA-AACC-------ATAATAGGAAGTGCCGTCAGAAG D_novemcinctus300409 ---TGCTCTGATGAA-AACC-------ATAATAGGAAGTGCCGTCAGAAG D_novemcinctus300549 ---TGTTGTGATGAT-ACTG-------GTAATAGGAAGTGCCGTCAGAAG D_melanogaster300098 --TGCACATGATGATAATTTGTC-TTCTTGATAGGAAGTGCCAACTGACA D_melanogaster300099 -CTGCACATGATGATAATTGAAAGTTCTTGATAGGAATTGCCGGCTGACA E_telfairi300714 ---TGGCCTGATGATA-TTG-------GTAATAGGAAGTGCCGTCAGACG E_caballus300107 ---TGCTCTGATGAA-ATCAC-------TAATAGGAAGTGCCGTCAGAAG E_caballus300108 ---TGTCCTGATGAT-ACTG-------CTATTAGGAAGTGCCGTCAGATG E_europaeus300220 -------------AGATTGAAAGAATACTTATAGGAAGTGCTTTCAGATG E_europaeus300307 ---TGCTCTGATGAA-ATCAC-------TCATAGGAAGTGCCATCAGATG E_europaeus300526 ---TGCTCTGATGAA-ATCAC-------TCATAGGAAGTGCCGTCAGATG E_europaeus300615 ---CGTCGTGATGAC-ACCGGGAACTAATGTTAGGAAGTGCCGTCAGAGT E_europaeus300616 ---TGCTCTGATGAA-ATCAC-------TCATAGGAAGTGCCGTCAGATG F_catus300291 ---TGCTCTGATGAA-ATCAC-------TTATAGGAAGTGCCGTCAGAAG G_gallus300024 -------------------------------------------------- G_aculeatus300010 -----CGATGACGAAAA-CCT------GCAATAGGAAGTGCCGTCTGATG G_aculeatus300093 ---TTCGGTGATGATAA------------CCTAGGAAGTGCCGTCCGATG G_gorilla300788 ---TGTCCTGATGAT-ACTT-------GTAATAGGAAGTGCCGTCAGAAG G_gorilla300787 ---TGCTCTGATGAA-ATCAC-------TAATAGGAAGTGCCGTCAGAAG H_sapiens300703 ---TGTCCTGATGAT-ACTT-------GTAATAGGAAGTGCCGTCAGAAG H_sapiens300704 ---TGCTCTGATGAA-ATCAC-------TAATAGGAAGTGCCGTCAGAAG L_africana300512 ---TGTCCTGATGAGA-TTG-------GTAATAGGAAGTGCCGTCAGAAG M_mulatta300511 ---TGCTCTGATGAA-ATCAC-------TAATAGGAAGTGCCGTCAGAAG M_mulatta300512 ---TGCCCTGATGAT-ACTT-------GTAATAGGAAGTGCCGTCAGAAG M_murinus300550 ---TGTCCTGATGAT-ACTG-------GAAATAGGAAGTGCCGTCAGAGA M_domestica300004 ---TGGCGTGATGAGAACCC-------AGAATAGGAAGTGCCGTCAGAC- M_domestica300006 ---GTTCATGATGAT-ACCAC------TCAATAGGAAGTGCCGTCAGATG M_musculus300078 -----TGATGATGAA-ACTAGAA----AAAAAAGGAAGTGCCGTCCGATG M_musculus300079 ---TGCTGTGATGAG-ATGAC------TAAGTAGGAAGTGCCGTCAGAGT M_lucifugus300506 ---TGCTCTGATGAA-ATCAC-------CCATAGGAAGTGCCGTCAGAAG M_lucifugus300962 ---TGCTCTGATGAA-ATCAC-------CCATAGGAAGTGCCGTCAGAAG M_lucifugus300963 ---TGTCCTGATGAT-ACTG-------ATCCTAGGAAGTGCCGTCAGATG M_lucifugus300386 ---TGCTCTGATGAA-ATCAC-------CAATAGGAAGTGCCGTCAGAAG M_lucifugus300505 ---TGTCCTGATGAT-ACCG-------ATCCTAGGAAGTGCCGTCAGATG O_anatinus304460 TGCAATGATGATAAC-AT-GG------AATATAGGAAGTGCCGTCAGATG O_anatinus304457 ---CCAAATGAAGAAAA-CCG------GGGATTGGAAGTGCCGTCAAATG O_anatinus304458 ---CCAGATGATGAGAA-CCG------TGGATAGGAAGTGCCGTCAGATG O_cuniculus300147 ---TGACCTGATTAT-ATTA-------GTAATAGGAAGTGCAATAAGAAG O_cuniculus300180 ---TGGCCTGATGAC-ACCA-------GTAATAGGCTGTGCCCTCAGAAG O_cuniculus300487 ---TGACCTGATGATA-CCA-------GTAATAGGAAGTGCCGTCAGAGG O_cuniculus300488 ---TGCTGTGATGAG-ATCAC-------TCTTAGGAAGTGCCGTCAGAAG O_latipes300028 ---GTCTGTGATGAAAA-TTG------TGAATAGGAAGTGCCGTCTGATG O_latipes300030 ---TTCAATGATGAAAA-CCT------GGAATAGGAAGTGCCGTCAGATG O_garnettii300677 ---TGTCCTGATGAT-ACTA-------GTAATAGGAAGTGTCATTAGAGG O_garnettii300678 ---TGCTCTGATGAA-ATCGC-------TAATAGGAAGTGCCGTCAGAAG P_troglodytes300550 ---TGTCCTGATGAT-ACTT-------GTAATAGGAAGTGCCGTCAGAAG P_troglodytes300551 ---TGCTCTGATGAA-ATCAC-------TAATAGGAAGTGCCGTCAGAAG P_pygmaeus300772 ---TGCTCTGATGAA-ATCAC-------TAATAGGAAGTGCCGTCAGAAG P_pygmaeus300771 ---TGTCCTGATGAT-ACTT-------GTAATAGGAAGTGCCGTCAGAAG R_norvegicus300508 ---TGCACTGATGAA-ACTAGAA----AT---AGGAAGTGCCGTCCGAAA R_norvegicus300509 ---TGCTGTGATGAG-GACAC------CA-GTAGGAAGTGCCGTCAGAGT S_araneus301034 ---TGCTCTGATGAC-ACGGC------T-AATAGGAAGTGCCGTCAGAAT S_tridecemlineatus300328 ---TGCTCTGATGAA-ACCATTA----ATAATAGGAAGTGCCGTCAGAAG T_nigroviridis300055 ---GTCAATGATGAAGT-CTT------GGAGTAGGAAGTGCCGTCAGATG T_nigroviridis300057 ---GTCAATGATGAAAA-CT---------AATAGGAAGTGCCGTCTGATG T_nigroviridis300134 ---TTCCGTGATGAAAAGTGC------TACATAGGAAGTGCCGTCTGACA T_belangeri300116 ---------AATTGAAATTATT--TTTGTAATAGGAAGTGCTGTCAGAAG T_belangeri300227 ---TGCTCTGATGAA-ATCAC-------TAATAGGAAGTGCCGTCAGAAG T_belangeri300266 ---TGCTCTGATGAA-ATCAC-------TAATAGGAAGTGCCGTCAGAAG T_belangeri300328 ---AGACTGGATGAC-AGTA-------GTGTTAGGAAGTGCCGTCAGGAG X_tropicalis300064 ---AAACATGATGAA-ATCTG------GATATAGGAAGTGCCGTCAGATG X_tropicalis300065 ---GAGCATGATGAA-ACCAG------GATATAGGAAGTGCCGTCAGATG C_familiaris300342 CGATAACTGACGATAACCTTTCC-T-----GGCTGACT--- C_porcellus300566 TAATAACTGACAATATTTATACT-TG----ATCTGACT--- C_porcellus300741 --ATAACTGACAATAACTACTAC-T-----GGCTGACT--- C_porcellus300951 CGATAACTGACGATATATATTCT-TG----ATCTGATT--- C_porcellus300952 CGATAACTGACGATAACTATTCC-T-----GGCTGACC--- D_rerio300029 CGATAACTGACGATGGCAAAGCAAAATCTTT-CTGA -----GGCTGTG----------CTGATTGTCA-TGTTCTGA-TGTG---- O_garnettii300117 -----GGCTGTG----------CTGATTGTCA-TGTTCTGT-TGTG---- P_troglodytes300619 -----AACTGTG--------TGCTGATTGTCA-CGTTCTGA-TTTG---- P_troglodytes300665 -----GACTGTG--------TGCTGATTGTCA-TGTTCTGA-CTTA---- P_pygmaeus300148 -----AACTGTG--------TGCTGATTGTCA-TGTTCTGA-TTTG---- P_pygmaeus300314 -----AACTG------------CTGATTGTCA-TGTTCTGA-TTT----- P_pygmaeus300418 -----AACTGTG--------TGCTGATTGTCA-TGTTCTGA-TTTG---- P_pygmaeus300737 -----GACTGTG--------TGCTGATTGTCA-TGTTCTGA-CTTA---- R_norvegicus300512 -----AAC-----------ATGCTGATTGTCA-TGTTCTGA-TTTG---- R_norvegicus300574 -----ATCTCTG--------TGCTGATTGTCA-TGTTCTGA-TCTG---- S_tridecemlineatus300064 -----ATCTGTG--------TGCTGATTGTCA-TGTTCTGA-TATG---- T_belangeri300003 -----GACTATG--------TGCTGTGTTCTA-ATTTGGGG-TGTG---- T_belangeri300027 -----AACTGTG--------TCTTGATTGTCA-GGTTCTGA-TTTG---- T_belangeri300246 -----GACTATG--------TGCTGTGTTCTA-ATTTGGGG-TGTG---- T_belangeri300348 -----AACTGTG--------TCTTGATTGTCA-GGTTCTGA-TTTG---- T_belangeri300425 -----GACTGTG--------TGCTGATTGTCA-AGTTCTGA-TTTGGCAA T_aestivum300486 CTTGAAAAGGCCTCCTTCCTTGATTA-ACATCCTAAATTGATCATATATT T_aestivum300385 CTTGAAAAGGCCTCCTTCCTTGATTA-ACATCCTAAATTGATCATATATT T_aestivum300192 TTGGAAAAGGCCAACCTCCTTGATTATAAATCCTAAACTGATCATAAACT T_aestivum300191 TTTAAAAAGGCCTCCTTCCTTGATTACACATCCTAAACTGATCATATATT T_aestivum300190 TTGAAAAAGGCCTCCTTCCTTGATTATACAACCTAAACTGATCATATAGT T_aestivum300188 CTTGGAAAGGCCTCCTTCCTTGATTA-ACACCCTAAACTGATCATATATT T_aestivum300120 TTGTAGAAGGCTGATTTCCCTGATTATAAATCCTAAACTGATCATAATCT T_dicoccoides300118 TTTATAAAGTCCTCTTTCCTTGATTATTCCTCCCAAACTGATCAAATTTT * E_telfairi300750 ----------- E CGACAACTGACGACATCCCTAGT-TA----G-CTGACT--- M_musculus300079 CGATAACTGACGATAACTGCTCC-T-----GGCTGACT--- M_lucifugus300506 CGATAACTGACGATAA---TTCC-T-----GGCTGACT--- M_lucifugus300962 CAATAACTGATGATAA---TTCC-T-----GGCTGACT--- M_lucifugus300963 CGATAACTGACGA--TTTCACAC-G-----ATCTGACC--- M_lucifugus300386 CGGTAACTGACGATAA---TTCC-T-----GGCTGACT--- M_lucifugus300505 CGCTAGCTGACGA--TTTCACAC-G-----ATCTGACC--- O_anatinus304460 CGAT300205 ----------- M_mulatta300241 ----------- M_mulatta300256 ----------- M_mulatta300653 ----------- M_murinus300212 ----------- M_murinus300569 ----------- M_domestica300019 ----------- M_musculus300858 ----------- M_lucifugus300141 ----------- O_anatinus303675 ----------- O_garnettii300550 ----------- O_garnettii300181 ----------- O_garnettii300350 ----------- O_garnettii300117 ----------- P_troglodytes300619 ----------- P_troglodytes300665 ----------- P_pygmaeus300148 ----------- P_pygmaeus300314 ----------- P_pygmaeus300418 ----------- P_pygmaeus300737 ----------- R_norvegicus300512 ----------- R_norvegicus300574 ----------- S_tridecemlineatus300064 ----------- T_belangeri300003 ----------- T_belangeri300027 ----------- T_belangeri300246 ----------- T_belangeri300348 ----------- T_belangeri300425 GCA-------- T_aestivum300486 CTGAGCAAGCA T_aestivum300385 CTGAGCAAGCA T_aestivum300192 CTGAGCAAAAC T_aestivum300191 CTGAGCAAACA T_aestivum300190 CTGAGCAAACA T_aestivum300188 CTGAGAAAGCA T_aestivum300120 CTGAGCAAACA T_dicoccoides300118 CCGAGCAACGA A--- T_belangeri300116 CGATAACTGACGATAGCT-ACTCCTG-----GCTGATG--- T_belangeri300227 CGATAACTGACAATAACTACTCC-T-----GGCTGATT--- T_belangeri300266 CGATAACTGACGATAACTACTCC-T-----GGCTGATG--- T_belangeri300328 CGGAAACTGAC---GTTT-ATGC-TT----TTCTGATC--- X_tropicalis300064 CGATAACTGACGAGAACCTTTT--CCTG--TTCTGACT--- X_tropicalis300065 CGATAACTGACGAGAACCTTTT--CCTG--TTCTGACT---

Copyright © 2008 Medical Biology, Faculty of Medicine, University of Miyazaki, All rights reserved