Family: snoR30_Z108

CLUSTAL W (1.83) multiple sequence alignment A_tauschii300011 ------------------------------GGCAACAGTGAT-GAGTTC- A_tauschii300012 ------------------------------CGTGACGGTGAT-GAGCCT- A_tauschii300013 ----------------------------AATGACTCAATGA--GAGTTT- A_tauschii300018 ------------------------------GGCAACAGTGAC-GAGTTC- A_tauschii300019 -------------------------------GCGAAGGTGAT-GAACCT- A_tauschii300020 ------------------------------TCATGAAACGAT-GAGTTC- A_tauschii300032 ------------------------------GACAACCGTGAT-GAGCCAA A_tauschii300391 ------------------------------GACAACTGTGAT-GAGCCCA A_tauschii300374 ------------------------------GACAACTGTGAT-GAGCCAA A_tauschii300132 ------------------------------GACAGCTGTGAT-GAGCCCA A_tauschii300226 ------------------------------GACAACCGTGAT-GAGCCAA A_tauschii300400 ------------------------------GACAACCGTGAT-GAGCCAA A_tauschii300492 ------------------------------GACAACTGTGAT-GAGCCAA A_thaliana300032 ---------------------------------AACAGTGAT-GAGTCAG A_thaliana300033 ---------------------------------AACAGTGAT-GAGTCAG C_elegans300120 ----------------------------------TGGGCGGTGAAATTGT C_familiaris300100 -------------------------------CTCTCTGTGATGAGAACCT D_novemcinctus300099 -------------------------------CTCCCTATGATGAGGACCT D_melanogaster300048 --------------------------------CTTCTCTGATGA--TCTT E_europaeus300186 ------------------------------ATTCTCTGTGATGAGAATCT E_europaeus300242 ------------------------------GTTCTCTGTGATGAGAATCT E_europaeus300418 ------------------------------TCTCTCAGTGATGAGGATCT F_catus300032 -------------------------------CTCTCTGTGATGAGAACCT G_gorilla301037 -------------------------------CTTCCTATGATGAGGACCT H_sapiens300169 --------------------------------TTCCTATGATGAGGACCT M_mulatta300220 -------------------------------CTCCCTATGATGAGGACCT M_murinus300395 -------------------------------CCTCCTATGATGAGGACCT M_musculus300709 ------------------------------ACCCCCTATGATGAGGACCT O_sativa300116 ------------------------------GGCAACAGTGAT-GAGTCC- O_sativa300117 ------------------------------TGTGGCAGTGAT-GAGCCC- O_sativa300118 ------------------------------TTTGACGGTGAT-TAGCCC- O_sativa300119 ------------------------------CATGGCGGTCTT-GAGCCC- O_sativa300003 ------------------------------AGCAACGGTGAT-GAGTC-- O_garnettii300570 ------------------------------TCTGGCTATGATGAGGACTT P_troglodytes300396 ------------------------------GTTCCCTATGGTGAGGACAT P_troglodytes300463 -------------------------------CTTCCTATGATGAGGACCT O_cuniculus300427 --------------------------------GAGCACTGTTCGTGACCC O_cuniculus300507 --------------------------------GAGCACTGTTTGTAAACT O_garnettii300477 --------------------------------GGGCACTGTTTGTAACCT O_garnettii300608 --------------------------------GAGCACTGTTCGTAACCT P_troglodytes300657 --------------------------------GAGCACTGTTCGTAACCC P_pygmaeus300732 --------------------------------GAGCACTGTTCGTAACCT R_norvegicus301094 --------------------------------AAGCACTGTTCGTAACCT S_tridecemlineatus300258 --------------------------------TTGCACTGTTCGTAACAC S_tridecemlineatus300343 --------------------------------TTGCACTGTTCGTAACCC T_nigroviridis300033 --------------------------------CTGCACCGTTCGTAACCT T_aestivum300015 ------------------------------GACAACCGTGAT-GAGCCAA T_dicoccoides300290 ------------------------------GACAACCGTGAT-GAGCCAA T_dicoccoides300136 ------------------------------GGCAACAGTGAT-GAGTTC- T_dicoccoides300137 ------------------------------GGCAACAGTGAC-GAGTTC- T_dicoccoides300138 ------------------------------GTTGACGGTGAT-GAGCCT- T_dicoccoides300139 ------------------------------CGTGACGGTGAT-GAGCCT- T_dicoccoides300140 ------------------------------GGTAACAGTGATTGAGTTC- T_dicoccoides300141 ---------------------------GTCCGCGAAGGTGAT-GAGCCT- T_dicoccoides300289 ------------------------------GACAACCGTGAT-GAGCCCA T_dicoccoides300147 ---------------------------------AACGATGAT-GTGTTT- T_dicoccoides300228 ------------------------------GACAACTGTGAT-GAGCCAA T_dicoccoides300232 ------------------------------GACAACCGTGAT-GAGCCAA T_dicoccoides300234 ------------------------------GACAACCGTGAT-GAGCCCA T_dicoccoides300288 ------------------------------GACAACTGTGAT-GAGCCAA T_dicoccoides300098 ------------------------------GACAACCGTGAT-GAGCCAA T_dicoccoides301047 ----------------------------AATGACTCAATGA--GAGTTT- T_dicoccoides301050 ----------------------GGCAACAATGACTCAATGA--GAGTAT- E_telfairi300567 CAGCAGGATTTAGACTACAATACAGCTGTTAAGTGCTATTTTGTCATTCC E_telfairi300588 CAGCAGGATTTAGACTACAATATAGCTGTTAAGTGCTATTTTGTCGTTCC E_telfairi300628 CAGCAGGGTT-AGATTACAATATAGATGCTCAGTGCTATGTTGTTGTTCC E_telfairi300660 CAGCAGGATTTAGACTACAATATAGCGGTTAAGTGCTATTTTGCCATTCC E_telfairi300682 CAGCAGGATTTAGACTACAATATAGCTGTTTAGTGCTATTTTGTCGTTCC A_tauschii300011 --------TTACAGACCTGTAATGATTCTTGCGGAAATGATCGCACAGTT A_tauschii300012 --------TTACAGACCTGTAATGATTCTTGCGAGCATGATCGCTTGATT A_tauschii300013 --------TAGCAGACTTGTAATTATTCTTGCGGGAATAATCGGAAGATT A_tauschii300018 --------TTACAGACCTATAATGATTCTTGCGGAAATGATTGCACAGTT A_tauschii300019 --------TTGCAGACCTGTAATGATTCTTGCGAGCATGATCGCTTGATT A_tauschii300020 --------TAGCAGACCAGTAATGATTCTTGCAGGAATGATCGCACGATT A_tauschii300032 TTTTACAGTTACCGACCTGTAATGACTCGTGCAGAAATAATCGCATGGT- A_tauschii300391 TTTTACAGTTACAGACCTGTAATGACTCCTGTGGAAATGATCGCATGGT- A_tauschii300374 TTTTACAGTTACAGACCTGTAATGACTCCTGCGGAAATGATCGCATGGT- A_tauschii300132 TTTTACAGTTACAGACCTGTAATGACTCCTGTGGAAATGATCGCATGGT- A_tauschii300226 TTTTACAGTTACAGACCTGTAATGACTCCTGCGGAAATGATCGCATGGT- A_tauschii300400 TTTTACAGTTACAGACCTGTAATGACTCCTGTGGAAATGATCGCATGGT- A_tauschii300492 TTTTGCAGTTACAGACCTGTAATGACTCCTGCGGAAATGATCGCATGGT- A_thaliana300032 T-------TTACAGACCTGTAATGAT---TGCGGTAATGATCGCATTAT- A_thaliana300033 T-------TTACAGACCTGTAATGAT---TGCGGTAATGATCGCATTAT- C_elegans300120 TG-------CACAGACCTGTTCCTATTAGTTCACTGAGGAAAATAGCAAT C_familiaris300100 T-------TCACAGACCTGTACTGATCT--CCGTGAGGATAAAAAAAACT D_novemcinctus300099 TT------TCACAGACCTGTACTGAGCC--CCGTGAGGATAAGTAA--CT D_melanogaster300048 TT------ACACAGACCTGTACTGAGCT---CATAACCGTGCAGAAAATT E_europaeus300186 TA------TCATAGACTTGTATCGAGAT--CCATGAGGATAAAACA--CT E_europaeus300242 TA------TCATAGACCTGTACCGAGAT--CCATGAGGATAAGACA--CT E_europaeus300418 TA------TCACAGACCTGTACCGAGAT--CCATGAGGATAAGACA--CT F_catus300032 TT------TCACAGACCTGTACTGAGCT--CCGTGAGGATAAGACA--CT G_gorilla301037 TT------TCACAGACCTGTACTGAGCT--CCGTGAGGATAAGTAA--CT H_sapiens300169 TT------TCACAGACCTGTACTGAGCT--CCGTGAGGATAAATAA--CT M_mulatta300220 TT------TCACAGACCTGTACTGAGCT--CCGTGAGGATAAGTGA--CT M_murinus300395 TG------TCACAGACCTGTACTGAGTT--CCGTGAGGATAAGTAA--CT M_musculus300709 TT------TCACAGACCTGTACTGATATATCTGTGAGGATAAGTAA--CT O_sativa300116 --------TTACAGACCTGTAATGATTCTTGCGGGAATGATCGCTTGATT O_sativa300117 --------TAACAGACCTGTAATGATTCTTGTGTATATGATCGCTTGATT O_sativa300118 --------TAACAGACCTGTAATGATTCTTGCGGATACGATCGCTTGAT- O_sativa300119 --------TAACAGACCTGAAATAATTATTGCGGATATGATTGCTTAATT O_sativa300003 --------CTACAGACCTGTAATGACTCCTGCGGAGATGATCGCATGGT- O_garnettii300570 TT------TCACAGACCTGTACTGATCT--CCATGAGGATAAGTAA--CT P_troglodytes300396 TT------TCACAGGCTTGCACTGAGCT--CTATGAGCATAAGTAA--TT P_troglodytes300463 TT------TCACAGACCTGTACTGAGCT--CCGTGAGGATAAGTAA--CT O_cuniculus300427 G--ATAGCCTGGCTGTGGCTGACGAGTTCCATTCCAGTGCCACAGCATTG O_cuniculus300507 G--TTAACCTGGCTGTAG-TAACAGGTTCCAGTCCAGTGCTACGGCATTT O_garnettii300477 G--TTGATTTGGCTATAGCTAATGGGCTCCATTCCAGTGCAACAGAATTT O_garnettii300608 G--TTGACTTGGCCATAGCTAACGGGTCC--ATCCAGTGCAACAGCATTT P_troglodytes300657 G--TTAGCCTGGCTGTAGCTAATGGGTTCCATTCCGGTGCAATAGCATTT P_pygmaeus300732 G--TTAGCCTGGCTGTAGCTAATGGGTTCCATTCCGGTGCAATAGCATTT R_norvegicus301094 G--TCAGTCTTGCTGTGGCTGACGGGTTCCATTCCAGTGCTACAGGATTT S_tridecemlineatus300258 G--TCGGCCTGGTTGTAGCTGGCAGATTCCATTTCAGTGCCACAGCATCT S_tridecemlineatus300343 T--TCAGCCTGGCTGTGGCTGGCGGGTTCCATTCCAGTGCCACAGCATCT T_nigroviridis300033 GGTTCAGGTTCCGTGTGAACT-CGGGTTCCATTCCGGTGCTAGAGCAGCT T_aestivum300015 TTTTACAGTTACAGACCTGTAATGACTCCTGTGGAAATGATCGCATGGT- T_dicoccoides300290 TTTTACAGTTACAGACCTGTAATGACTCCTGTGGAAATGATCGCATGGT- T_dicoccoides300136 --------TTACAGACCTGTAATGATTCTTGCGGAAATGATCGCACAGTT T_dicoccoides300137 --------TTACAGACCTGTAATGATTCTTGCGGAAATGATCGCACAATT T_dicoccoides300138 --------TTACAGACCTGTACTGATTCTTGCGAGCATGATCGCTTGATT T_dicoccoides300139 --------TTACAGACCTGTAATGGTTCTGGCGAGCATGATCGCTTGATT T_dicoccoides300140 --------TTAAAAACCCGTAATGATTCTTGCGGAAATGATCGCACAGTT T_dicoccoides300141 --------TTGCAGACCTGTAATGCTTCTTGCGAGCATGATCGCTTGATT T_dicoccoides300289 TTTTACAGTTACAGACCTGTAATGACTCCTGCGGAAATGATCGCATGGT- T_dicoccoides300147 --------TAGCAGACTTGTAATGATTCTTGCGGGAGTGATCACACTATT T_dicoccoides300228 TTTTACAGTTACAGACCTGTAATGACTCCTGCGGAAATGATCGCATGGT- T_dicoccoides300232 TTTTACAGTTACAGACCTGTAATGACTCCTGTGGAAATGATCGCATGGT- T_dicoccoides300234 TTTTACAGTTACAGACCTATAATGACTCCTGTGGAAATGATCGCATGGT- T_dicoccoides300288 TTTTACAGTTACAGACCTGTAATGACTCCTGCGGAAATGATCGCATGGT- T_dicoccoides300098 TTTTACAGTTACAGACCTGTAATGACTCCTGCGGTAATGATCGCATGGC- T_dicoccoides301047 --------TAGCAGACATGTAATTATTCTTGTGGGAATAATTGGAAGATT T_dicoccoides301050 --------TAGCAGACTTGTAATTATTCTTACGGGAATAATCAGAAGATT E_telfairi300567 CC--CTGCTCAAAGTAATGTTGTTTCTTATCTGTCCTTGTCTGCTAGTTT E_telfairi300588 CC--CTGCTCAAAGTAAAGTTGTTTCTTATCTATCCCTGTCTGCTAGCTT E_telfairi300628 AT--CCTCTCAGAGAA-----GTTTCTTTTCTAACCCTTTCTGCAAGACT E_telfairi300660 CC--CTGCTCAAAGTAAAGTTGTTTGTTATCTATCCCTGTCTGCTAGTTC E_telfairi300682 CC--CTGCTCAAAGTAAAGCTGTTTCTTATCTATCCCTGTCTGCTAGTTT A_tauschii300011 CAGA----GAACATCTAAGGGAC--TGAGTTGTT---------------- A_tauschii300012 CAAA----GAACATCTAAGGGAC--TGAGTCCTT---------------- A_tauschii300013 CAAA----TCACATCCAAGGGAT--TGAGTTATA---------------- A_tauschii300018 CAAA----GAACATCTAAGGGAC--TGAGTTGTT---------------- A_tauschii300019 CAAA----GAACATCTAAGGGAC--CGAGTCGGC---------------- A_tauschii300020 CAAA----GAACATCTAAGGGAC--TGAGT-GTGC--------------- A_tauschii300032 CAAA----GAACATCTAAGGGAC--TTATTTGTC---------------- A_tauschii300391 CAAA----GAACATCTAAGGGAC--TGAGTTGTC---------------- A_tauschii300374 CAAA----GAACATCTAAGGGAC--TGAGTTGTC---------------- A_tauschii300132 CAAA----GAACATCTAAGGGAC--TGAGTTGTT---------------- A_tauschii300226 CAAA----GAACATCTAAGGGAC--TGAGTTGTC---------------- A_tauschii300400 CAAA----GAACATCTAAGGGAC--TGAGTTGTC---------------- A_tauschii300492 CAAA----GAACATCTAAGGGAC--TGAGTTGTC---------------- A_thaliana300032 TAT-----GAACATCTAAGGGAC--TGAGT-------------------- A_thaliana300033 TAT-----GAACATCTAAGGGAC--TGAGT-------------------- C_elegans300120 CATG-----AGCCT------------------------------------ C_familiaris300100 CTGA----GGAG-------------------------------------- D_novemcinctus300099 CTGA----GGAGAC------------------------------------ D_melanogaster300048 GTAA----ACTGAAA----------------------------------- E_europaeus300186 CTGA----GGAGAC------------------------------------ E_europaeus300242 CTGA----GGAAAA------------------------------------ E_europaeus300418 CTGA----GGAGAC------------------------------------ F_catus300032 CTGA----AGAGAC------------------------------------ G_gorilla301037 CTGA----GGAGAT------------------------------------ H_sapiens300169 CTGA----GGAGA------------------------------------- M_mulatta300220 CTGA----GGAGAT------------------------------------ M_murinus300395 CTGA----GGAGAC------------------------------------ M_musculus300709 CTGA----GGAGGC------------------------------------ O_sativa300116 CAAA----GAACATCTAAGGGAC--TGAGTTATC---------------- O_sativa300117 CAAA----GAACATCTAAGGGAC--TGAGTTGTC---------------- O_sativa300118 CAAA----GAACATCTAAGGGAC--TGAGTAATA---------------- O_sativa300119 CAGA----GCACATCTAAGGGAC--TGAGTTGCC---------------- O_sativa300003 CAAA----GAACATCTAAGGGAC--TGAGTTGTC---------------- O_garnettii300570 CTGA----GGAGAC------------------------------------ P_troglodytes300396 CTGA----GGAAAT------------------------------------ P_troglodytes300463 CTGA----GGAGACAGTGAACTG--TGATTGACTGACTGACTGGTGGCTC O_cuniculus300427 CCATGGATTGACACACGACTGAC--TGCCTGG----TGGCTTCCGGTTTC O_cuniculus300507 CCAA----AGGCACATAACTGAC--TGACTAG----TGGCTTTCAGTTTC O_garnettii300477 CCAG----GGACACATAACTGAC--TGATTGG----TGGATTTTGATTTG O_garnettii300608 CCAG----GGACACATGACTGAC--TGACTGG----TGGCTTTCAGTTTC P_troglodytes300657 CCAG----CGACACATGACTGAC--TGACTGG----TGGCTTTCAGTTTC P_pygmaeus300732 CCAG----CGACACATGACTGAC--TGACTGG----TGACTTTCAGTTTC R_norvegicus301094 CCAG----TGACACATGACTGAC--TGGCTGGCTAGTGGCTTTCAGTTTC S_tridecemlineatus300258 CCAG----CAATACATAACTGAC------CAG----TGGCTTTCAGTTTC S_tridecemlineatus300343 CCAG----CAACACATGACTGAC--TGACCAG----TGGCTTTCAGTTTC T_nigroviridis300033 CCGGTG--AGGCAGGGGGGCGGCGCCCTCCTGCGCCCTGCTCCCCGTT-C T_aestivum300015 CAAA----GAACATCTAAGGGAC--TGAGTTGTC---------------- T_dicoccoides300290 CAAA----GAACATCTAAGGGAC--TGAGTTGTC---------------- T_dicoccoides300136 CAAA----GAACATCTAAGGGAC--TGAGTTGTT---------------- T_dicoccoides300137 CAAA----GAACATTTAAGGGAC--TGAGTTGTT---------------- T_dicoccoides300138 CAAA----GACCATCTAAGGGAC--TGAGTCGTT---------------- T_dicoccoides300139 CAAA----GAACATGTAAGGGAC--TGAGTCGTT---------------- T_dicoccoides300140 CAAA----GAACATCTAAGGGAC--TGAGTTGTT---------------- T_dicoccoides300141 CAAA----GAACATCTAAGGGAC--CGGGTGGGC---------------- T_dicoccoides300289 CAAA----GAACATCTAAGGGGC--TGAGTTGTC---------------- T_dicoccoides300147 CGAA----GAACACCTGATGGAC--TGAGT-GTAC--------------- T_dicoccoides300228 CAAA----GAACATCTAAGGGAC--TGAGTTGTC---------------- T_dicoccoides300232 CAAA----GAACATCTAAGGGAC--TGAGTTGTC---------------- T_dicoccoides300234 CAAA----GAACATCCAAGGGAC--TGAGTTGTC---------------- T_dicoccoides300288 CAAA----GAACATCTAAGGGAC--TGAGTTGTC---------------- T_dicoccoides300098 AAAA----GAACATCTAAGGGAC--TGAGTTGTC---------------- T_dicoccoides301047 CAAA----TCACATCCAAGGGAT--TGAGTTATA---------------- T_dicoccoides301050 CAAA----TCACATCCAAGGGAT--TGAGTTGTA---------------- E_telfairi300567 CTTG----TAGCAGCCCAGGGACCCTTGGTCTCATACAT----------- E_telfairi300588 CTTG----TAGCAGCCCAGGGATGCTTGGTCTCATACAT----------- E_telfairi300628 TGTG----AATCAGCCAAGGTATT-----TCTCACAGAA----------- E_telfairi300660 CTTG----TAGCAGCCTAGGGATGCTTGGTCTCATACAT----------- E_telfairi300682 CTTG----TAGCAGCCCAGGGACGCTTGGTCTCATACAT----------- A_tauschii300011 ---------------------------------------------- A_tauschii300012 ---------------------------------------------- A_tauschii300013 ---------------------------------------------- A_tauschii300018 ---------------------------------------------- A_tauschii300019 ---------------------------------------------- A_tauschii300020 ---------------------------------------------- A_tauschii300032 ---------------------------------------------- A_tauschii300391 ---------------------------------------------- A_tauschii300374 ---------------------------------------------- A_tauschii300132 ---------------------------------------------- A_tauschii300226 ---------------------------------------------- A_tauschii300400 ---------------------------------------------- A_tauschii300492 ---------------------------------------------- A_thaliana300032 ---------------------------------------------- A_thaliana300033 ---------------------------------------------- C_elegans300120 ---------------------------------------------- C_familiaris300100 ---------------------------------------------- D_novemcinctus300099 ---------------------------------------------- D_melanogaster300048 ---------------------------------------------- E_europaeus300186 ---------------------------------------------- E_europaeus300242 ---------------------------------------------- E_europaeus300418 ---------------------------------------------- F_catus300032 ---------------------------------------------- G_gorilla301037 ---------------------------------------------- H_sapiens300169 ---------------------------------------------- M_mulatta300220 ---------------------------------------------- M_murinus300395 ---------------------------------------------- M_musculus300709 ---------------------------------------------- O_sativa300116 ---------------------------------------------- O_sativa300117 ---------------------------------------------- O_sativa300118 ---------------------------------------------- O_sativa300119 ---------------------------------------------- O_sativa300003 ---------------------------------------------- O_garnettii300570 ---------------------------------------------- P_troglodytes300396 ---------------------------------------------- P_troglodytes300463 TCAGTTTCGGGTCTTGGAGACAAGC--------------------- O_cuniculus300427 AG-TCCTGGAGACAAAT----------------------------- O_cuniculus300507 AGGTCTTGGAGACAAAC----------------------------- O_garnettii300477 GGGTCTTGGAGACATGC----------------------------- O_garnettii300608 AGGTCTTGGAGACAAAT----------------------------- P_troglodytes300657 AGGTCTTGGAGACAAAT----------------------------- P_pygmaeus300732 AGGTCTTGGGGACAAAT----------------------------- R_norvegicus301094 AGGTCTTGGAGACATAT----------------------------- S_tridecemlineatus300258 AGGTCTTGGAGTCAGTG----------------------------- S_tridecemlineatus300343 AGGTCTTGGAGACAGTG----------------------------- T_nigroviridis300033 ACTCTCCGGGAACACCGTCAAATCACATCCAAGGGATTGAGTTATA T_aestivum300015 ---------------------------------------------- T_dicoccoides300290 ---------------------------------------------- T_dicoccoides300136 ---------------------------------------------- T_dicoccoides300137 ---------------------------------------------- T_dicoccoides300138 ---------------------------------------------- T_dicoccoides300139 ---------------------------------------------- T_dicoccoides300140 ---------------------------------------------- T_dicoccoides300141 ---------------------------------------------- T_dicoccoides300289 ---------------------------------------------- T_dicoccoides300147 ---------------------------------------------- T_dicoccoides300228 ---------------------------------------------- T_dicoccoides300232 ---------------------------------------------- T_dicoccoides300234 ---------------------------------------------- T_dicoccoides300288 ---------------------------------------------- T_dicoccoides300098 ---------------------------------------------- T_dicoccoides301047 ---------------------------------------------- T_dicoccoides301050 ---------------------------------------------- E_telfairi300567 ---------------------------------------------- E_telfairi300588 ---------------------------------------------- E_telfairi300628 ---------------------------------------------- E_telfairi300660 ---------------------------------------------- E_telfairi300682 ----------------------------------------------