Family: snoR111

CLUSTAL W (1.83) multiple sequence alignment A_tauschii300409 --------TTCGTA-GTTGGCGCCCCCC--ATGCCGCCATCTTTG-TGAG--GAGGGGAT A_tauschii300420 --------TTGATAAGTTGGCGGCCCCC--ATGCCGCCATCTTCG-CGAG--GAGGGGAT A_thaliana300017 ----AAAATGGGGCAAGAGAGAGTAACGGTGTCTCTGAGTCCTTGATGAACCGGCGAGGG O_sativa300226 TGTTAAGGTTGGGGAACCAATATCTCCATGGTGTCACCATCTTTG-CAAG--AAGGGGAT O_sativa300228 CCTTAAGGTTGGGGCACCAATATCTCCATGGTGTCACCATCTTTG-CAAG--AAGGGGAT T_aestivum301245 --------CTGACAAGTTGGCGGCCCCC--ATGCCGCCATCTTCG-CGAG--GAGGGGAT A_tauschii300474 -----CTGTCCGATGATGATCAATTTAAAT--ACTTCCGTTCTTC-TGAT--GCGCTAT- A_tauschii300465 -----CTGTC---TGATGATGAAACCAATT--ACTTTCGTTCTTC-TGAT--GTGCTAT- A_tauschii300434 -----------GACCATCATTCACCATGGT--ACTTTCCTTGTTC-TGAA--ATTCT--- A_tauschii300433 -----CTTTCCAATGACGGTCAAACTAAAT--ACTTTCGTTCTTT-TGAT--GCGCCAT- A_tauschii300431 -----CTGTCCGATGATGATCAAACTAAAT--ACTTTCGTTCTTC-TGAT--GTGCCAT- A_tauschii300366 -----TCGTCCGGTGATGATCAAACTAT----------ATACTTC-TGTT-----CTAT- A_tauschii300364 -----TTCTCCGGTGATGACCCAAA-TAAT--ACTTTCGTTCTTC-TGAA--ATTC---- A_tauschii300363 -----CTGTCCGATGATGATGAAACTAAAC--ACTTTCGTTCTTC-TGAT--GTGCTAT- A_tauschii300266 ----GCTGCCTGATGATGATCAAACTT-AT--ACTTTCGTTCTTC-TGAT--GTGCCAT- A_tauschii300264 -------GTCTTGTGATGATCAAACTAATA--------GTTCTTC-TGAT--GCGCAAT- A_tauschii300260 -----CTGTCCGATGATGATCAAACTAAAT--ACTTTCGTTCTTC-TGAT--GTGCTAT- A_tauschii300257 -----CTGTCTGATGATGATCAAACTAAAT--ACTTTCATTCTTC-TGAC--ACGCTGT- O_anatinus304268 -----------GAATATGATG-ATTTGCAA--ACTTTCGTTCTAC-CGAG--TGTAA--- O_sativa300203 -----GTCTCCGATGATGATGTATTTTTAT--ACTTTCGTTCTTC-TGAA--GTTG---- O_sativa300005 -----GTCTCTGATGATGATTAAAAATGATTAACTTTCGTTCTTC-TGAT--GCGCTTTT O_sativa300006 -----GTCTCCGATGATGATGTAAATTTTT--ACTTTCGTTCTTC-TGAA--GTTG---- O_sativa300045 ------GACTCAATGATGATGCATTTTTAT--ATTTTTGTTCTTC-TGAA--GTTACAA- O_sativa300198 -----GTCTCCGACGAT---GTAAATTTAT--ACTTTCGTTCTTC-TGAA--GTTGG--- P_patens300003 -----CTTTCTAAGGATGAGCATAC-AAAT--ACTTTCGTTCTAC-TTAT--TTGCTTT- P_patens300004 -----CGTTCTAATGATGATCAAAC-AAAT--ACTTTCGTTCTAC-CTAT--TTGCTAT- P_patens300005 -----CTTTCTAAGGATGAGCATAC-AAAT--ACTTTCGTTCTAC-TTAT--TTGCTTT- P_patens300006 -----CGTTCTAATGATGATCAAAC-AAAT--ACTTTCGTTCTAC-CTAT--TTGCTAT- P_patens300024 -----CTCTCTGGTGATGATCAAAC-AAAT--ACTTTCGTTCTAC-TTAG--TTGCTAA- P_patens300025 -----CTCTCTGGTGATGATCAAAC-AAAT--ACTTTCGTTCTAC-TTAG--TTGCTAA- T_aestivum300038 ----GCTTCCCGATGATGATCAAACT--AT--ACTTTCGTTCTTC-TGAT--GTGCTAT- T_aestivum301023 -----CTGTCCGATGATGATCAAACTAAAT--ACTTTCGTTCTTC-TGAT--GTGCCAT- T_aestivum301024 -----CTGTCCGATGATGATCAAACTAAAT--ACTTTCGTTCTTC-TGAT--GTGCCAT- T_aestivum300731 -----CTGTCCGATGATGATGAAACTAAAC--ACTTTCGTTCTTC-TGAT--GCGCTAT- T_aestivum300730 -----TTCTCCGGTGATGACCCAAA-TAAT--ACTTTCGTTCTTC-TGAA--ATTC---- T_aestivum300362 -----CTGTCTGACGATGATCAAACTAAAT--ACTTTCGTTCTTC-TGAT--GCACTAA- T_aestivum300361 -----CTGTCCGATGATGATCAAACTAAAT--ACTTTCGTTCTTC-TGAT--GCACTAT- T_aestivum300319 -----CTGTCTGATGATGATCAAACTAAAT--ACTTTCATTCTTC-TGAC--ACGCTGT- T_aestivum300315 ----GCTGCCTGATGATGATCAAGCTT-AT--ACTTTCGTTCTTC-TGAT--GTGCCAT- T_aestivum300310 -----CTGTCCGATGATGATCAAACTAAAT--ACTTTCGTTCTTC-TGAT--GTGCTAT- T_aestivum300289 -----CTGTCCGATGATGATCAAACTAAAG--ACTTTCGTTCTTC-TGAT--GTGCTAT- T_aestivum300284 -----CTGTCCGATGATGATCAAACTAAAT--ACTTTCATTCTTC-TGAT--GTGCTAT- T_aestivum300283 -----CTGTCCAATGATGATCAAACTAAAT--ACTTTCGTTCTTC-TGAT--GTGCCAT- T_aestivum300187 -----CTGTCCGATGATGATGAAACTAAAT--ACTTTCGTTCTTC-TGAT--GTGCTAT- T_aestivum300186 -----TTCTCCGGTGATGACCCAAA-TAAT--ACTTTCGTTCTTC-TGAA--ATTC---- T_aestivum300039 -----CTGTCCGATGATGATCAAACTAAAT--ACTTTCGTTCTTC-TGAT--GCGCTAT- T_aestivum301368 -----TCGTCCGGTGATGATCAAACTAT----------ATACTTC-TGTT-----CTAT- T_aestivum301369 -----TCGTCCGGCGATGATCAAACTAT----------ATACTTC-TGTT-----CTAT- T_aestivum301460 -----TTGTCTTGTGATGATCAAACTAATA--------GTTCTTC-TGAT--GCGCAAT- T_dicoccoides300222 -----CTGCCCGATGAT---CAACCTAAAT--ACTTTCGTTCTTC-TGAT--GTGCCAT- T_dicoccoides300219 -----CTGTCCGATGATGATCAAACTAAAT--ACTTTCGTTCTTC-TGAT--GTGCCAT- T_dicoccoides300214 -----CTTTCCAATGATGATCAAACTAAAT--ACTTTCGTTCTTC-TGAT--GCGCCAT- T_dicoccoides300055 -----CTGTCCGATGATGATCAAACTAAAT--ACTTTCGTTCTTC-TGAT--GCACTAA- * * A_tauschii300409 AGATCGACGTG-TCAAGAAATCGTTTCAATTGCCATGGCTTCCCGTAGGCAATATGATTG A_tauschii300420 AGATCGACGCG-TCAAGAAATCGTTTCAATTGCCATGTCGTGCAGTAGGCAATATGATTG A_thaliana300017 AAATCAATCTGGCCGAGATATCGTTTCAGTCGTTCTTTGTTTTGGTTTACGATCTGATTG O_sativa300226 AGATCGACGCG-TCAAGAAATCGTTTCTGTTGCCATGGC-TCGAGTAAGCAATACGATTG O_sativa300228 AGATCGACGCG-TCAAGAAATCGTTTCTGTTGCCATGGC-TCCAGTAGGCAATACGATTG T_aestivum301245 AGATCGACGCG-TCAAGAAATCGTTTCAATTGCCATGGCTTCCCGTAGGCAATATGATTG A_tauschii300474 TTTGTGGTGTGGTGCGGAATCA--ATTTGGAGACCTGAACTGAGGAAAT----------- A_tauschii300465 CTCATGGTACAGTGCGGAAGCA--ATTTTCAGACCTGAACTGAGGAAGT----------- A_tauschii300434 ---------CTATTTGGAAGAAG----TGGAGACCTGAACTGAGGAT------------- A_tauschii300433 CTCAAGGCGCGGTGCGGAAGCA--ATTTGGAGACCTGAATTGAGGAAAT----------- A_tauschii300431 CTGATGGCCCGGTGCGGAAGCA--ATTTGGAGACCTGAACTGAGGATAT----------- A_tauschii300366 CTCATAGCACTGTGTGGAAGTG--ATTTGGAGACCTGAACTGAGGAAGG----------- A_tauschii300364 --------ACAATGTGGAAGAA----CTGGAGACCTGAACTGAGGAGAC----------- A_tauschii300363 CTCATGGCGCGGTGCGGAAGCA--ATTTGGAGACCTGAACTGAGGAAAA----------- A_tauschii300266 TTTGTGGCGCTGTGCGGAAGCA--ATTTGGAGACCTGAGCTGAGGAAAT----------- A_tauschii300264 CTCATGGCGTGGTGCGGAAGCA--ATTTGGAGACCTGAACTGAGGTA------------- A_tauschii300260 CTCATGGCGCGTTGTGGAAGCA--ATTTGGAGACCTGAACTGAGGAAAT----------- A_tauschii300257 CTCATGGCTCGGTGCGGAAGCG--ATTTGGAGACCTGAACTGAGGAAAA----------- O_anatinus304268 -------TCTTATGCGGAGAACA---TTGGAGACCTGATCTGATTT-------------- O_sativa300203 ---------TAATGTGGAAGAACAATTTGGAGACCTGAACTGAGGGGTT----------- O_sativa300005 CTCATGGCGCGGTGCGGAAGCA--ATCTGGAGACCTGAACTGAGGAGAC----------- O_sativa300006 ---------CAATGTGGAAGAACTATTTGGAGACCTGAACTGAGGGGGT----------- O_sativa300045 ----ACTTGCAATGTGGAAGAACAATTTGGGGACCAGAACTGATGGGGT----------- O_sativa300198 ---------CAATGTGGAAGAACTATATGGAGACCTGAACTGGGGGTT------------ P_patens300003 ------ACGCAATGAGGAAATCT-ACTTGGAGACCTGAACTGAAGAAAG----------- P_patens300004 ------ATGCAATGAGGAAAAAC-ATTTGGAGACCTGAACTGAAGAATG----------- P_patens300005 ------ACGCAATGAGGAAATCT-ACTTGGAGACCTGAACTGAAGAAAG----------- P_patens300006 ------ATGCAATGAGGAAAAAC-ATTTGGAGACCTGAACTGAAGAATG----------- P_patens300024 ------ATGCATTGAGGAAAGAT-ATTTGGAGACCTGAACTGAAGCAAGAGAT------- P_patens300025 ------ATGCATTGAGGAAAGAT-ATTTGGAGACCTGAACTGAAGCAAGAGAT------- T_aestivum300038 CTT--GGTGCTGTGCGGAAGCA--ATTTGGAGACCTGAGCTGAGGAAAT----------- T_aestivum301023 CTGATGGCCAGGTGCGGAAGCA--ATTTGGAGACCTGAACTGAGGATAT----------- T_aestivum301024 CTGATGGCCAGGTGCGGAAGCA--ATTTGGAGACCTGAACTGAGGATAT----------- T_aestivum300731 CTCATGGCGCGGTGCGGAAGCA--ATTTGGAGACCTGAACTGAGGAAAA----------- T_aestivum300730 --------ACAATGTGGAAGAA----CTGGAGACCTGAACTGAGGAGAC----------- T_aestivum300362 -----GGTGCGATGTGGAAGCA--ATTTGGAGACCTGAACTGAGGATTA----------- T_aestivum300361 -----GGTGCGATGCGGAAGCA--ATTTGGAGACCTGAACTGAGGATTA----------- T_aestivum300319 CTCATGGCTCGGTGCGGAAGCG--ATTTGGAGACCTGAACTGAGGAAAA----------- T_aestivum300315 TTTGTGGCGCTGTGCGGAAGCA--ATTTGGAGACCTGAGCTGAGGAAAT----------- T_aestivum300310 CTCATGGCGCGTTGTGGAAGCA--ATTTGGAGACCTGAACTGAGGAAAT----------- T_aestivum300289 CTCATGGCGCTGTGCGGAAGCA--ATTTGGAGACCTGAACTGAGGAAAT----------- T_aestivum300284 CTCATGGCGCTGTGCGGAAGCA--ATTTGGAGACCTGAACTGAGGAAAT----------- T_aestivum300283 CTCATGGCGCTGTGCGGAAGCA--ATTTGGAGACCTGAACTGAGGAAAT----------- T_aestivum300187 CTCATGGCGCGGTGCGGAAGCA--ATTTGGAGACCTGAACTGAGGAAAA----------- T_aestivum300186 --------ACAATGTGGAAGAA----CTGGAGACCTGAACTGAGGAGAC----------- T_aestivum300039 CTCATGGCATGGTGCGGAAGTA--TTTTGGAGACCTGAACTGAGGAAAT----------- T_aestivum301368 CTCATAGCACTGTGTGGAAGTG--ATTTGGAGACCTGAACTGAGGAAGG----------- T_aestivum301369 CTCATAGCACTGTGTGGAAGTG--ATTTGGAGACCTGAACTGAGGAAGG----------- T_aestivum301460 CTCATGGCGTGGTGCGGAAGCA--ATTTGGAGACCTGAACTGAGGAACC----------- T_dicoccoides300222 CTGATGGCCCGGTGAGGAAGCA--CTTTGGAGACCTGAACTGAGGATAT----------- T_dicoccoides300219 CTGATGGCCAGGTGCGGAAGCA--ATTTGGAGACCTGAAC-GAGGATAT----------- T_dicoccoides300214 CTCATGGCGTGGTGTGGAAGCA--ATTTGGAGACCTGAACTGAGGAAAT----------- T_dicoccoides300055 -----GGTGCGATGCGGAAGCA--ATTTGGAGACCTGAACTGAGGATTA----------- ** * A_tauschii300409 TTGCTTGCGTACAC---------------------------------------------- A_tauschii300420 TTGCTTGCGTACAC---------------------------------------------- A_thaliana300017 TTGCTCGTCCACAT---------------------------------------------- O_sativa300226 TTGCTTGCGTACAA---------------------------------------------- O_sativa300228 TTGCTTGCGTACAA---------------------------------------------- T_aestivum301245 TTGCTTGCGTACACATGTGCTATCTCATGGCGCGGTGCGGAAGCAATTTAGAGACCTGAA A_tauschii300474 ------------------------------------------------------------ A_tauschii300465 ------------------------------------------------------------ A_tauschii300434 ------------------------------------------------------------ A_tauschii300433 ------------------------------------------------------------ A_tauschii300431 ------------------------------------------------------------ A_tauschii300366 ------------------------------------------------------------ A_tauschii300364 ------------------------------------------------------------ A_tauschii300363 ------------------------------------------------------------ A_tauschii300266 ------------------------------------------------------------ A_tauschii300264 ------------------------------------------------------------ A_tauschii300260 ------------------------------------------------------------ A_tauschii300257 ------------------------------------------------------------ O_anatinus304268 ------------------------------------------------------------ O_sativa300203 ------------------------------------------------------------ O_sativa300005 ------------------------------------------------------------ O_sativa300006 ------------------------------------------------------------ O_sativa300045 ------------------------------------------------------------ O_sativa300198 ------------------------------------------------------------ P_patens300003 ------------------------------------------------------------ P_patens300004 ------------------------------------------------------------ P_patens300005 ------------------------------------------------------------ P_patens300006 ------------------------------------------------------------ P_patens300024 ------------------------------------------------------------ P_patens300025 ------------------------------------------------------------ T_aestivum300038 ------------------------------------------------------------ T_aestivum301023 ------------------------------------------------------------ T_aestivum301024 ------------------------------------------------------------ T_aestivum300731 ------------------------------------------------------------ T_aestivum300730 ------------------------------------------------------------ T_aestivum300362 ------------------------------------------------------------ T_aestivum300361 ------------------------------------------------------------ T_aestivum300319 ------------------------------------------------------------ T_aestivum300315 ------------------------------------------------------------ T_aestivum300310 ------------------------------------------------------------ T_aestivum300289 ------------------------------------------------------------ T_aestivum300284 ------------------------------------------------------------ T_aestivum300283 ------------------------------------------------------------ T_aestivum300187 ------------------------------------------------------------ T_aestivum300186 ------------------------------------------------------------ T_aestivum300039 ------------------------------------------------------------ T_aestivum301368 ------------------------------------------------------------ T_aestivum301369 ------------------------------------------------------------ T_aestivum301460 ------------------------------------------------------------ T_dicoccoides300222 ------------------------------------------------------------ T_dicoccoides300219 ------------------------------------------------------------ T_dicoccoides300214 ------------------------------------------------------------ T_dicoccoides300055 ------------------------------------------------------------ A_tauschii300409 ---------- A_tauschii300420 ---------- A_thaliana300017 ---------- O_sativa300226 ---------- O_sativa300228 ---------- T_aestivum301245 CTGGGGAAAT A_tauschii300474 ---------- A_tauschii300465 ---------- A_tauschii300434 ---------- A_tauschii300433 ---------- A_tauschii300431 ---------- A_tauschii300366 ---------- A_tauschii300364 ---------- A_tauschii300363 ---------- A_tauschii300266 ---------- A_tauschii300264 ---------- A_tauschii300260 ---------- A_tauschii300257 ---------- O_anatinus304268 ---------- O_sativa300203 ---------- O_sativa300005 ---------- O_sativa300006 ---------- O_sativa300045 ---------- O_sativa300198 ---------- P_patens300003 ---------- P_patens300004 ---------- P_patens300005 ---------- P_patens300006 ---------- P_patens300024 ---------- P_patens300025 ---------- T_aestivum300038 ---------- T_aestivum301023 ---------- T_aestivum301024 ---------- T_aestivum300731 ---------- T_aestivum300730 ---------- T_aestivum300362 ---------- T_aestivum300361 ---------- T_aestivum300319 ---------- T_aestivum300315 ---------- T_aestivum300310 ---------- T_aestivum300289 ---------- T_aestivum300284 ---------- T_aestivum300283 ---------- T_aestivum300187 ---------- T_aestivum300186 ---------- T_aestivum300039 ---------- T_aestivum301368 ---------- T_aestivum301369 ---------- T_aestivum301460 ---------- T_dicoccoides300222 ---------- T_dicoccoides300219 ---------- T_dicoccoides300214 ---------- T_dicoccoides300055 ----------