Family: snoJ33

CLUSTAL W (1.83) multiple sequence alignment A_tauschii300109 ---------------------------------GTATGTGGATGATGAGAT--CACAAGT A_tauschii300114 ---------------------------------GGATGTGGATGATGAGAT--CACAAGT A_tauschii300126 ---------------------------------GTATGTGGATGATGAGAT--CACAAGT A_tauschii300143 ---------------------------------GTATGTGGATGATGAGAT--CACAAGT A_tauschii300424 ---------------------------------GGATGTGGATGATGAGAT--CACAAGT A_tauschii300439 ---------------------------------GGGCGTGGGTGATGAGAT--CACAAGT A_tauschii300470 ---------------------------------CTATGTGGATGATGAAAT--CACAAGT A_thaliana300070 -------------------------------------TTGGATGATGAGAAA-CAAAAAT C_porcellus301034 -------------------------------------------------------TTGAG C_porcellus301035 -------------------------------------------------------CTGAG C_porcellus301036 -------------------------------------------------------CCCAA O_anatinus303106 -------------------------------------------------------GCGAG S_pombe300072 ------------------------------------------------TTGTATGATGAT T_aestivum301246 ---------------------------------GGATGTGGATGATGAGAT--CACAAGT T_aestivum301355 ---------------------------------GGGCGTGGATGATGAGAT--CACAAGT T_aestivum301403 ---------------------------------GGATGTGGATGATGAGAT--CACAAGT T_dicoccoides301097 ---------------------------------GGGCGTGGATGATGAGAT--CACAAGT T_dicoccoides301098 ---------------------------------GGGCGTGGATGATGAGAT--CACAAGT T_aestivum300280 -----------AGGCAGCCTCTTTATC--ATTACAGTGGCATTGGAGGTGTTGCGTT-GC T_aestivum300281 -----------AGGCAGCCTCTTTATC--ATTACAGTGGCATTGGAGGTGTTGCGTT-GC T_aestivum300301 GGAGAGCCCTGCCCGTGCGAATGTCTCTGATTTCAGTGG-AATGGAGGTGTTGTGTT-GA T_aestivum300305 -----------AGGCAGCCCTTTTGTCTGATTACAATGGCAATGGAGGTGTTGCATT-GC T_aestivum300306 -----------AGGCAGCCTCTTTGTCCCAAT-CAATGGCAATGGTGGTGTTGCGTT-GC T_aestivum300307 -----------AGGCAGCCCCTATGCCCCATT-CAATGGCAATGGAGGTGTTTCGTT-GC T_aestivum300308 -----------AGGCAGCCTCTTTACC--ATTACAGTGGCATTGGAGGTGTTGCGTT-GC T_aestivum300309 -----------AGGCAGCCTCTTTACC--GTTACAGTGGCATTGGAGGTGTTGCGTT-GC T_aestivum300030 -----------AGGCAGCCTCTTTGTCC-ATTACAATGGCAATGGAGGTGTTGCGTT-GC T_aestivum300031 -----------AGGCAGCCCCTATGCCCCATTACAATGGCAATGGAGGTGTTGCGTT-GC T_aestivum300032 -----------AGGCAGCCTCTTTACC--GTTACAGTGGCATTGGAGGTGTTGCGTT-GC T_aestivum300033 -----------AGGCAGCCTCTTCACC--ATTGCAGTGGCATTGGAGGTGTTGCGTT-GC T_aestivum300036 -----------AGGCATCCCCTTTGCCTGATTACGATGGCTATGGAGGTGTAACTTTAGC T_aestivum300037 -----------AGGCAGCCCTTTTGTCTGATTACAATGGTAATTGTGGTGTTGCATT-GC T_aestivum300059 -----------AGGCCGCCCCTTTGTCTAATTACAATGTCTATGGAGGTGTTATGTT-GC T_aestivum300199 -----------AGGCAACCTCTTTGTCTAATTACAATGTCTATGGAGGTATTGCATT-GC T_aestivum300276 -----------AGGCAGCCCTTTTGTCC-ATTACAATGGCAATGGAGGTGTTGCGTT-GC T_aestivum300277 -----------AGGCAGCCCTTTTGTCC-ATTACAATGGCAATGGAGGTGTTGCGTT-GC T_aestivum301433 ---------------------------------------------AGGTGTTGTGTT-GA T_dicoccoides300048 -----------AGGCCGCCCCTTTGTCTAATTACAATGTCTATGGAGGTGTTATGTT-GC A_tauschii300109 AAAAA-------TACAGTTATCCCTGTCTTACTTCCTTTGAAG-GGTGCTGAGAATA--- A_tauschii300114 AAAAA-------TACAGTTATCCCTGTCTTACTTCCTCGGAAG-GGTGCTGAGAATA--- A_tauschii300126 AAAA--------TACAGTTATCCCTGTCTTACTTTCTCGGAAG-GGTGCTGAGAATA--- A_tauschii300143 AAAAA-------TACAGTTATCCCTGTCTTACTTCCTCGGAAG-GGTGCTGAGAATA--- A_tauschii300424 AAAAA-------TACAGTTATCCCTGTCTTACTTCCTTGGAAG-GGTGCTGAGAGAA--- A_tauschii300439 AAAAA-------TACAGTTATCCCTGTCTTACTTCCTTGGAAG-GGTGCTGAGAATA--- A_tauschii300470 AAAAAA------TGCAGTTATCCCTGTCTTGCTTCCTCGGAAG-GGTGCTGAGAATA--- A_thaliana300070 CAAAA-------TACAGTTATCCCTGGCTTAGGGTTTAAAGCCCGTTGCTGAGTCT---- C_porcellus301034 CTGAGGATGATTTAAAGTTATCCCTGTCTGAA-----ATGCCATCTTG--TGGAGTCCTG C_porcellus301035 TCTGTGATGATTAAA-GTTATCCCTGTCTGAAGGCAAAGGCCTTTCTGTGTGGATTGTGG C_porcellus301036 TCTATGATGGTTAA---TTATCCCTATCTGAA----AATCTCAGCTGAAGGGAAATAATT O_anatinus303106 CTAGTGATGAGTAAAAGTTATCCCTGTCTGAA--CAAAATCCTTTGTG---GAATTTTGA S_pombe300072 ACTATTTTTTTTTACAGTTATCCCTGTCTAAA--------GCATAGTGTTGAGAATGGTA T_aestivum301246 AAAAA-------TACAGTTATCCCTGTCTTACTTCCTCGGAAG-GGTGCTGAGAATA--- T_aestivum301355 AAAAAAT------ACAGTTATCCCTGTCTTACTTCCTCGGAAG-GGTGCTGAGAATA--- T_aestivum301403 AAAAA-------TACAGTTATCCCTGTCTTACTTCCTCGGAAG-GGTGCTGAGAAAA--- T_dicoccoides301097 AAAAAATTAAAATACAGTTATCCCTGTCTTACTTCCTCGGAAG-GCTGCTGAGAATA--- T_dicoccoides301098 AAAAAATTAAAATACAGTTATCCCTGTCTTACTTCCTCGGAAG-GCTGCTGAGAATA--- T_aestivum300280 TCGGATAG----TAAACCTTTTGCTCTTCAGATTAGCTGAGGGGGAGGCTCCTGCTTCCC T_aestivum300281 TCGGATAG----TAAACCTATTGCTCTTCAGATTAGCTGAGGGGGAGGCTCCTGCTTCCC T_aestivum300301 TTAGAGAT----TAAATCTTCTGCTCTTCATATTAGCTGAGGGGCAGGCTCTGGCTTCCC T_aestivum300305 TCGGAGAG----TGAATCTTCTGCTCTTCAGATTAGCTGAGGGGGAGGCTCTGGCTTCCC T_aestivum300306 TCGGAGAG----TAAATCTTCTGCTCTTCAGATTAGCTGAGGGGGTGGCTCT-GCTTCCC T_aestivum300307 TCCGAGAG----TGAATCTTCTGCTCTTCAGATTAGCTGAGGGGAAGGCTCT-GCTTCCC T_aestivum300308 TCGGAGAG----TAAACCTTTTGCTCTTCAGATTAGCTGAGGGGGCGGCTACGGCTTCCC T_aestivum300309 TCGGAGAG----TAAACCTTTTGCTCTTCAGATTAGCTGAGGGGGAGGCT-CTGCTTCCC T_aestivum300030 TCTGAGAG----TAAATCTTCTGCTCTTAAGATTAGCTGAGGGGGAGGATCT-GCTTCCC T_aestivum300031 TCGGAGAG----TAAACCTTCTGCTCTTCAGATTAGCTGAGGGGGAGGCTCT-GCTTCCC T_aestivum300032 TCGGATAG----TGAACCTTTTGCTCTTCAGATTAGCTGAGAGGGAGGCTTTGGCTTCCC T_aestivum300033 TCGGATAG----TAAACCTTTTGCTCTTCAGATTAGCTGAGGGGGAGGCTATGGCTTCCC T_aestivum300036 TCGAAGAG----TAAATCTTCTGCTCTTAAGATTATCTGTGGTGGAGGTT---------- T_aestivum300037 CCGGAGAG----TGAATCTTCTGCTCTTCAGATTAGCTGAGGGG-AGGCTCTGGCTTCCC T_aestivum300059 TTGGAGAT----TAAATCTTCAGCTCTTCAGATTAGCTGAGGGGGCCGCTT--GCTTCCC T_aestivum300199 TAGGAGAT----TAAATCTTCTGCTCTTCAGATTAGCCGAGGGAGGTGCTT--GCTGATA T_aestivum300276 TCGGAGAT----TAAATCTTCTGCTCTTCAGATTAGCTGAGTGGGAGGCTCT-GCTTCCC T_aestivum300277 TCGGAGAT----TAAAT-TTCTGCTCTTCAGATTAGCTGAGTGGGAGGCTCT-GCTTCCC T_aestivum301433 TTAGAGAT----TAAATCTTCTGCTCTTTAGATTAGCTGAGGGGCAGGCTCTGGCTTCCC T_dicoccoides300048 TTGGAGAT----TAAATCTTCAGCTCTTCAGATTAGCTGAGGGGGCCGCTT--GCTTCCC * ** A_tauschii300109 -CTTCGAA------TCTGACACAGAT---------------------------------- A_tauschii300114 -CTTTCAA------TCTGACACGAGT---------------------------------- A_tauschii300126 -CTTTCAA------TCTGACACGATT---------------------------------- A_tauschii300143 -CTTTCAA------TCTGACACGGTT---------------------------------- A_tauschii300424 -CTTTGAA------TCTGACACAATT---------------------------------- A_tauschii300439 -CTTCGAA------TCTGACACGATT---------------------------------- A_tauschii300470 -CTTTGAA------TCTGACACAGAT---------------------------------- A_thaliana300070 -TTTGTAA------TCTGACA--------------------------------------- C_porcellus301034 ATTACTGA----AGCTCAA----------------------------------------- C_porcellus301035 ATCTCTGA----AACTCAG----------------------------------------- C_porcellus301036 CATTCTGA----GGTTTAG----------------------------------------- O_anatinus303106 TTTCCTGA----GGCTCAG----------------------------------------- S_pombe300072 AATCTGAA----TA---------------------------------------------- T_aestivum301246 -CTTTGAA------TCTGACACAATT---------------------------------- T_aestivum301355 -CTTCGAA------TCTGACACGATT---------------------------------- T_aestivum301403 -CTTTGAA------TCTGACACAATT---------------------------------- T_dicoccoides301097 -CTTCGAA------TCTGACACGATT---------------------------------- T_dicoccoides301098 -CTTCGAA------TCTGACACGATTAATCTTCTGCTCTTCAGATTAGCCGAGGTGGATG T_aestivum300280 TCCCTGAAAGCTGGTCTAGTAGTCTTAA-GAACATT------------------------ T_aestivum300281 TCCCTGAA-GCTGGTCTAGTAGTCTTAA-GAACATT------------------------ T_aestivum300301 CCTTTGAA-GCTTGCCTAGTAGTCTTAA-GAACATT------------------------ T_aestivum300305 TCTCTGAA-GCTTGTCTAGTAGTCTTAA-GAACATT------------------------ T_aestivum300306 TCCTTGAA-GCTTGTCTAGTAGTCTTAA-GAACATC------------------------ T_aestivum300307 TCCTTGAA-GCTTGTCTAGTAGTCTTAA-GAACATC------------------------ T_aestivum300308 TCCCTGAA-GCTGGTCTAGTAGTCTTAA-GAACATT------------------------ T_aestivum300309 TCCCTGAA-GCTGGTCTAGTAGTCTTAA-GAACATT------------------------ T_aestivum300030 TCCTTGAA-GCTTGTCTAGTAGTCTTAA-GAACATC------------------------ T_aestivum300031 TCCTTGAA-GCTTGTCTAGTAGTCTTAA-GAACATC------------------------ T_aestivum300032 TCCGTGAA-GCTGGTCTAGTAGTCTTAA-GAACATC------------------------ T_aestivum300033 TCCCTGAA-GCTGGTCTAGTAGTCTTAA-GAACATT------------------------ T_aestivum300036 -CCTTGAA-GCTGGTCTAGTAGTCTTAA-GAACATT------------------------ T_aestivum300037 TCTCTGAA-GCTTGTCTAGTAGTCTTATTAAACAAG------------------------ T_aestivum300059 TCTTCGAA-GTTGGTCTAGTAGTCTTAA-GAACAAT------------------------ T_aestivum300199 TAATGGAA-AATC-TTTATTAG-CTTAA-GAGCAAT------------------------ T_aestivum300276 TCGTTGAA-GCTTGTCTAGTAGTCTTAA-GAACATC------------------------ T_aestivum300277 TCGTTGAA-GCTTGTCTAGTAGTCTTAA-GAACATC------------------------ T_aestivum301433 ACTCTGAA-GCTTGCCTAGTAGTCTTAA-GAACATT------------------------ T_dicoccoides300048 TCTTCGAA-GTTGGTCTAGTAGTCTTAA-GAACAAT------------------------ * A_tauschii300109 ---------------------------------------------- A_tauschii300114 ---------------------------------------------- A_tauschii300126 ---------------------------------------------- A_tauschii300143 ---------------------------------------------- A_tauschii300424 ---------------------------------------------- A_tauschii300439 ---------------------------------------------- A_tauschii300470 ---------------------------------------------- A_thaliana300070 ---------------------------------------------- C_porcellus301034 ---------------------------------------------- C_porcellus301035 ---------------------------------------------- C_porcellus301036 ---------------------------------------------- O_anatinus303106 ---------------------------------------------- S_pombe300072 ---------------------------------------------- T_aestivum301246 ---------------------------------------------- T_aestivum301355 ---------------------------------------------- T_aestivum301403 ---------------------------------------------- T_dicoccoides301097 ---------------------------------------------- T_dicoccoides301098 TTCCGGCTTCCCTCCGTGAAGCTAGTCTAGTAGTCTTAAGAACATT T_aestivum300280 ---------------------------------------------- T_aestivum300281 ---------------------------------------------- T_aestivum300301 ---------------------------------------------- T_aestivum300305 ---------------------------------------------- T_aestivum300306 ---------------------------------------------- T_aestivum300307 ---------------------------------------------- T_aestivum300308 ---------------------------------------------- T_aestivum300309 ---------------------------------------------- T_aestivum300030 ---------------------------------------------- T_aestivum300031 ---------------------------------------------- T_aestivum300032 ---------------------------------------------- T_aestivum300033 ---------------------------------------------- T_aestivum300036 ---------------------------------------------- T_aestivum300037 ---------------------------------------------- T_aestivum300059 ---------------------------------------------- T_aestivum300199 ---------------------------------------------- T_aestivum300276 ---------------------------------------------- T_aestivum300277 ---------------------------------------------- T_aestivum301433 ---------------------------------------------- T_dicoccoides300048 ----------------------------------------------