Family: snR52

CLUSTAL W (1.83) multiple sequence alignment D_melanogaster300221 -------------------------------------------------- S_cerevisiae300050 TACTATGATGAATGACATTAGCGTGAACAATCTCTGATACAAAATCGAAA C_porcellus300321 -------------------------------------------------- C_porcellus300945 -------------------------------------------------- D_rerio300117 -------------------------------------------------- D_rerio300215 -------------------------------------------------- D_melanogaster300114 -------------------------------------------------- E_telfairi300768 -------------------------------------------------- E_caballus300317 -------------------------------------------------- E_europaeus300644 -------------------------------------------------- E_europaeus300645 -------------------------------------------------- G_gallus300100 -------------------------------------------------- G_gorilla300391 -------------------------------------------------- H_sapiens300669 -------------------------------------------------- L_africana300479 -------------------------------------------------- M_mulatta300019 -------------------------------------------------- M_mulatta300585 -------------------------------------------------- M_murinus300472 -------------------------------------------------- M_domestica300078 -------------------------------------------------- M_musculus300771 -------------------------------------------------- M_lucifugus300629 -------------------------------------------------- O_anatinus304276 -------------------------------------------------- O_cuniculus300403 -------------------------------------------------- O_garnettii300620 -------------------------------------------------- P_troglodytes300529 -------------------------------------------------- P_pygmaeus300589 -------------------------------------------------- R_norvegicus301006 -------------------------------------------------- S_araneus300195 -------------------------------------------------- S_tridecemlineatus300305 -------------------------------------------------- T_nigroviridis300103 -------------------------------------------------- T_belangeri300409 -------------------------------------------------- O_cuniculus300452 -------------------------------------------------- O_latipes300061 -------------------------------------------------- O_latipes300062 -------------------------------------------------- P_troglodytes300147 -------------------------------------------------- P_troglodytes300237 -------------------------------------------------- P_troglodytes300646 -------------------------------------------------- P_troglodytes300647 -------------------------------------------------- P_pygmaeus300308 -------------------------------------------------- P_pygmaeus300319 -------------------------------------------------- P_pygmaeus300648 -------------------------------------------------- P_pygmaeus300649 -------------------------------------------------- R_norvegicus300881 -------------------------------------------------- S_cerevisiae300071 -------------------------------------------------- S_araneus300205 -------------------------------------------------- S_araneus301002 -------------------------------------------------- S_araneus301003 -------------------------------------------------- T_nigroviridis300066 -------------------------------------------------- T_nigroviridis300067 -------------------------------------------------- T_belangeri300200 -------------------------------------------------- T_belangeri300315 -------------------------------------------------- X_tropicalis300079 -------------------------------------------------- X_tropicalis300080 -------------------------------------------------- X_tropicalis300081 -------------------------------------------------- D_melanogaster300221 -----------------------------------------GTCTGGATG S_cerevisiae300050 GATTTTAGGATTAGAAAAACTTATGTTGCCTTCCTTCTGAAAGCTGAATG C_porcellus300321 ------------------------------------------ATTGAATG C_porcellus300945 ------------------------------------------GCCAAATG D_rerio300117 ------------------------------------------TCTTGATG D_rerio300215 ------------------------------------------GCTTGATG D_melanogaster300114 ---------------------------------------------ATATG E_telfairi300768 ------------------------------------------GCTGGATG E_caballus300317 ------------------------------------------GCTGAATG E_europaeus300644 ------------------------------------------GCCGAGTG E_europaeus300645 ------------------------------------------GCCGAGTG G_gallus300100 ------------------------------------------GCTATGTG G_gorilla300391 ------------------------------------------GCTGAATG H_sapiens300669 ------------------------------------------GCTGAATG L_africana300479 ------------------------------------------GCTAAATG M_mulatta300019 ---------------------------------------------TAACG M_mulatta300585 ------------------------------------------GCTGAATG M_murinus300472 ------------------------------------------GCCAAATG M_domestica300078 ------------------------------------------GCTGAATG M_musculus300771 ------------------------------------------GCC-AATG M_lucifugus300629 ------------------------------------------GCTGAATG O_anatinus304276 ------------------------------------------GCCGGATG O_cuniculus300403 ------------------------------------------GCTGAATG O_garnettii300620 ------------------------------------------GCCGAATG P_troglodytes300529 ------------------------------------------GCTGAATG P_pygmaeus300589 ------------------------------------------GCTGAATG R_norvegicus301006 ------------------------------------------GCT-AATG S_araneus300195 ------------------------------------------GCTAAATG S_tridecemlineatus300305 ------------------------------------------GCTGAATG T_nigroviridis300103 ------------------------------------------TCTTGATG T_belangeri300409 ------------------------------------------GCCGAATG O_cuniculus300452 -----------------------------------------CCTTCACTG O_latipes300061 -----------------------------------------TCTTCAGTG O_latipes300062 -----------------------------------------TCTTCGGGG P_troglodytes300147 ------------------------------------------ACTCACTG P_troglodytes300237 ------------------------------------------CCTCATTG P_troglodytes300646 -----------------------------------------CCTTCTATG P_troglodytes300647 ------------------------------------------CCTCACTG P_pygmaeus300308 ------------------------------------------ACTCACTG P_pygmaeus300319 ------------------------------------------CCTCACTG P_pygmaeus300648 ------------------------------------------CCTCACTG P_pygmaeus300649 -----------------------------------------CCTTCTATG R_norvegicus300881 ------------------------------------------CTTCTGTG S_cerevisiae300071 -------------------------------------------TAAGATG S_araneus300205 -----------------------------------------CCTACAAAG S_araneus301002 ------------------------------------------CCTCGCTG S_araneus301003 -----------------------------------------CCTTCTGTG T_nigroviridis300066 -----------------------------------------TCTTCACTG T_nigroviridis300067 -----------------------------------------TCTTCTGTG T_belangeri300200 ------------------------------------------CCTTGCTG T_belangeri300315 -----------------------------------------CCTTCCATG X_tropicalis300079 -----------------------------------------ACTTCCATG X_tropicalis300080 -----------------------------------------CCTTCTATG X_tropicalis300081 -----------------------------------------CCTGCAGTG * D_melanogaster300221 ATGAAACGATGG-----TATCTGAATGAGCAAAT--TATTGTTGAGAAGC S_cerevisiae300050 ATGATATCCCAC-TAACTGAGCAGTC-AGTAGTTGGTCCTTTGGTTGCAT C_porcellus300321 ATGATACCCTAC-TAACTTGGCAG-TCAGTAATTGGTCCTTTGGTTGCAT C_porcellus300945 ATGATAGTCTAC-AAACTGAGCAG-TCAGTAGTTGGTCCTTTGATTGCAT D_rerio300117 ATGACAC-------CACTTGAAAC-TGAACAGCTGCTATTTCAGTTGTTC D_rerio300215 ATGATACCCTTTCAGACTGAGCAA-ATTGTAGTTGGTCCTACATTTGCAC D_melanogaster300114 ATGTTAAC------AGCTTGTAAT-----GATTATGCATTGTGATTATTC E_telfairi300768 ATGATATCCCTC-TAACTGAGCAAGTCGGTAGTTGGTCCTTCGGTTGCAT E_caballus300317 ATGATATCCCAC-TCACTGAGCAGTC-AGTAGTTGGTCCTTTGGTTGCAT E_europaeus300644 ATGATATCCCAC-TAACTGAGCAT-TCAGTAGTTGGTCCTTTGGTTGCAT E_europaeus300645 ATGATATCCCAC-TAACTGAGCAT-TCAGTAGTTGGTCCTTTGGTTGCAT G_gallus300100 ATGATACCCCAA-TGTCTGACCAC-TCCGTAGTAGGTCCATGGTGTGTAA G_gorilla300391 ATGATATCCCAC-TAACTGAGCAGTC-AGTAGTTGGTCCTTTGGTTGCAT H_sapiens300669 ATGATATCCCAC-TAACTGAGCAGTC-AGTAGTTGGTCCTTTGGTTGCAT L_africana300479 ATGATATCCCAC-TAACTGAGCAGTCCAGTAGTTGGTCCTTTGGTTGCAT M_mulatta300019 GTGAACTCAAAA--AACTTTCCAATCCTTCAGTAGCTGATCCAGTCATTT M_mulatta300585 ATGATATCCCAC-TAACTGAGCAGTC-AGTAGTTGGTCCTTTGGTTGCAT M_murinus300472 ATGATACCCTAC-TAACTGAGCAG-TCAGTAGTTGGTCCTTTGGTTGCAT M_domestica300078 ATGATATCCCAC-TCACTGAG-----------------------TTGCTT M_musculus300771 ATGACACCACAC-TAACTGAGCAG-TTAGTAGTTGGTCCTTTGATTGCAT M_lucifugus300629 ATGATATCCCAC-TAACTGAGCA-GTCAGTAGTTGGTCCTTTGATTGCAT O_anatinus304276 ATGATCTCCCA--CGACTGAGCAT-TCTGTAGTTGGTCCTTGGTTTGCAC O_cuniculus300403 ATGATATCCCAC-TCACTGAGCAGTC-AGTAGTTGGTCCTTTGGTTGCAT O_garnettii300620 ATGACA-CCCAC-TAACTGAGCAG-TCAGTAGTTGGTCCTTCG-GTGCAT P_troglodytes300529 ATGATATCCCAC-TAACTGAGCAGTC-AGTAGTTGGTCCTTTGGTTGCAT P_pygmaeus300589 ATGATATCCCAC-TAACTGAGCAGTC-AGTAGTTGGTCCTTTGGTTGCAT R_norvegicus301006 ATGATACCGCAC-TAACTGAGCAG-TTAGTAGTTGGTCCTTTGATTGCAT S_araneus300195 ATGATTTCCCAC-TAACTGAGCAAGTCAGTAGTTGGTCCTTTGATTGCAT S_tridecemlineatus300305 ATGATATCCCAC-TAACTGAGCAGTC-AGTAGTTGGTCCTTTGGTTGCAT T_nigroviridis300103 ATGATACAAAGA-ACGCTGAGCAA-AATGTAGTTGGTCCTTCATTTGCAT T_belangeri300409 ATGATACCCCAC-TAACTGAGCAG-TCGCTAGTTGGTCCTTTGGTTGCAT O_cuniculus300452 ATGAGTAGC-------TTC--TGACTTT-CGTTC--TTCT-GAGTTTGTC O_latipes300061 ATGATTTAATAC----AG---TGACTTT-CGTTC--TTCT-GAGAT-TAC O_latipes300062 ATGATTTA-CAC----AG---TGACTTT-CGTTC--TTCT-GAGTC-TAC P_troglodytes300147 ATGAGTAGC-------TTC--TGACTTT-CATTC--TTCT-GAGTTTG-C P_troglodytes300237 ATTAGTAGC-------TTC--TGACTTT----TG--TTCT-G--TTTG-C P_troglodytes300646 ATGATTTTATCA----AAA--TGACTTT-CGTTC--TTCT-GAGTT-TGC P_troglodytes300647 ATGAGTA---CG----TTC--TGACTTT-CGTTC--TTCT-GAGTTTG-C P_pygmaeus300308 ATGAGTAGC-------TTC--TGACTTT-CATTC--TTCT-GAGTTTG-C P_pygmaeus300319 ATTAGTAGC-------TTC--TGACTTT----TG--TTCT-GAGTTTG-C P_pygmaeus300648 ATGAGTAACGTT----TTC--TGACTTTTCGTTC--TTCTTGAGTTTGGC P_pygmaeus300649 ATGATTTTATCA----AAA--TGACTTT-CGTTC--TTCT-GAGTT-TGC R_norvegicus300881 ATGACTTTACCC----AAA--TGACTTT-CGTTC--TTCT-GAGTT-TGC S_cerevisiae300071 ATGATCAACTTTTTATATCAATAACTTT-CGTTC--TACTGACTGTGATC S_araneus300205 AGAATC-----------ACTTTGACAGT-T-TCA--TTTT-GAGTT-TGC S_araneus301002 ATGAGTAGC-------TTC--TGACTTT-CGTTC--TTCT-GAGTTTG-C S_araneus301003 ATGATTTTATCC----AAAATTGACTTT-CGTTC--TTCT-GAGCT-TGC T_nigroviridis300066 AGGATCTCA--------ACTTTGACTTT-CGTTC--TTCT-GAGTT-TCA T_nigroviridis300067 ATGATCAA-CAC----AT---TGACTTT-CGTTC--TTCT-GAGTC-TAC T_belangeri300200 ATGAGTAGC-------TTC--TGACTTT-CGTTC--TTCT-GAGTTTG-C T_belangeri300315 ATGATCTTATCA----AAA--TGACTTT-CGTTC--TTCT-GAGTT-TGC X_tropicalis300079 ACGATTCT-CA---------TTGACTTT-TGTTC--TTCT-GAGGT-TTC X_tropicalis300080 ATGATTTT-TTC----AT--TTGACTTT-CGTTC--TTCT-GAGTTATTC X_tropicalis300081 ATGAGTAAACT-----------GACTTT-CGTTC--TACT-GAATT-TGC D_melanogaster300221 CT-TTTACCATCTGCTGCCTTCCTTCTGATCGG----------------- S_cerevisiae300050 A---TGA-TGCAGTT-AATTGTTTCA--AGACGGGACTGATGGCAGC--- C_porcellus300321 A---TGA-TGTAGTA--ATTGTTACAAAAGATGAGAGGGATAGGAAA--- C_porcellus300945 A---TGA-TATAATA--ATTGTTTCA--AGACGGGACTGATGGCAGC--- D_rerio300117 CA-CTGA-TGTGA-------TTTTCA--AGACGGGACTGATTGCAAGACA D_rerio300215 -AGTTGA-TGCAAGC-A--TATTTCA--AGACGGGGCTGAGAGCAGT--- D_melanogaster300114 A-----AGTTTATT----TTGTTTCA--AGACGGGACTGACTATA----- E_telfairi300768 G---TGA-TGCAATTGC-TTGTTTCA--AGACGGGACTGATGGCAGC--- E_caballus300317 A---TGA-T-CAATT-AATTGTTTCA--AGACGGGACTGATGGCAGC--- E_europaeus300644 TA--TGA-TGCAATT-CATTGTTTCA--AGACGGGACTGATGGCAGC--- E_europaeus300645 TA--TGA-TGCAATT-CATTGTTTCA--AGACGGGACTGATGGCAGC--- G_gallus300100 A---TGA-TG-GACTGCGTAGTTTCA--AGACGGGACTGATGGCAGC--- G_gorilla300391 A---TGA-TGCGAT--AATTGTTTCA--AGACGGGACTGATGGCAGC--- H_sapiens300669 A---TGA-TGCGAT--AATTGTTTCA--AGACGGGACTGATGGCAGC--- L_africana300479 A---TGA-TGCAATT-AATTGTTTCA--AGACGGGACTGATGGCAGC--- M_mulatta300019 GAAGTGGCTGTGA----ATTATTTCA--AGAAGGGACTGATGGTGTGT-- M_mulatta300585 A---TGA-TGCGAT--AATTGTTTCA--AGACGGGACTGATGGCAGC--- M_murinus300472 A---TGA-TGCAGTA--ATTGTTTCA--AGACGGGACTGATGGCAGC--- M_domestica300078 A---TGA-TGCAA-----TTGTTTCA--AGACGGGACTGATGGCAGG--- M_musculus300771 G---TGA-TGTAATC--ATTGTTTCA--AGACGGGACTGAAGGCGGC--- M_lucifugus300629 A---TGA-TGCAATT-AATTGTTTCA--AGACGGGACTGATGGCAGC--- O_anatinus304276 A---TGA-TGCAATTTCAGTGTTTCA--AGACGGGACTGACGGCAGC--- O_cuniculus300403 A---TGA-TGCAAC--AGTTGTTTCA--AGACGGGACTGATGGCAGC--- O_garnettii300620 T---TGA-TGCAATA--ATTGTTCCA--GCGAGGGACTGATGCCGCG--- P_troglodytes300529 A---TGA-TGCGAT--AATTGTTTCA--AGACGGGACTGATGGCAGC--- P_pygmaeus300589 A---TGA-TGCGAT--AATTGTTTCA--AGACGGGACTGATGGCAGC--- R_norvegicus301006 A---TGA-TGTAATC--ATTGTTTCA--AGACGGGACTGATGGCAGC--- S_araneus300195 AG--TGA-TGCAATT-AATTGTTTCA--AGACGGGACTGATGGCAGC--- S_tridecemlineatus300305 A---TGA-TGCAAT--AATTGTTTCA--AGACGGGACTGATGGCAGC--- T_nigroviridis300103 TAGCTGA-TGTCTAC-TGTCCTTTCA--AGACGGGGCTGAGAGAAGT--- T_belangeri300409 A---TGA-TGTAATT--ATTGTTTCA--AGACGGGACTGATGGCAGCTTT O_cuniculus300452 GA-GTGAAGCCAGA--TGCTGTTC-CTGAGATGG---------------- O_latipes300061 ----TGAAGCCAAC--ATTTCTGTCCTGAGAAGA---------------- O_latipes300062 ----TGAAGCCAGC--CTTTCTGTTCTGAGAAGA---------------- P_troglodytes300147 ----TGAACCCAGA--TGCCATTC-CTGGGAAGG---------------- P_troglodytes300237 ----TGAAGCTAGA--TGCCATTC-CAGATAAGA---------------- P_troglodytes300646 ----TGAAGCCACA--TTT-AGGTACTGAGAAGG---------------- P_troglodytes300647 ----TGAAGCCAGA--TGCAATTT-CTGAGAAGG---------------- P_pygmaeus300308 ----TGAACCCAGA--TGCCATTC-CTGGGAAGG---------------- P_pygmaeus300319 ----TGAAGCTAGA--TGCCATTC-CAGATAAGA---------------- P_pygmaeus300648 ----TGAAGCCAGA--TGCAATTTTCTGAGAAAG---------------- P_pygmaeus300649 ----TGAAGCCACA--TTT-AGGTACTGAGAAGG---------------- R_norvegicus300881 ----TGAAGCCACA--CTC-AGGTGCTGAGAGAG---------------- S_cerevisiae300071 AA-ACGATCTTGTAGAGAACTTTTACTCTGAAT----------------- S_araneus300205 ----TGAAGTAAAA---TTTACTTACTTGGAAGA---------------- S_araneus301002 ----TGAAGCCAGA--TGCCATT--CTGAGAAGG---------------- S_araneus301003 ----TGAAGCCATA--ATAGAGAAACTGAGAAGG---------------- T_nigroviridis300066 ----TGAAGCTGATG-TTTTTCACACTGAGAAGA---------------- T_nigroviridis300067 ----TGAAGCCA-C--CTCGTTGTCCTGAGATGA---------------- T_belangeri300200 ----TGAAGCCAGA--TGACATTT-CTGAGAAGG---------------- T_belangeri300315 ----TGAAGCCATA--TTT-ATGTACTGAGAAGG---------------- X_tropicalis300079 ----TGAAGCAACT--TGATTT--TCTGAGAAGT---------------- X_tropicalis300080 ----TGAAGCGATT--TTATATAGTCTGAAAAGG---------------- X_tropicalis300081 ----TGAAGACATA--TTT--TTATCTGAAAAGG---------------- D_melanogaster300221 -------------------------------------------------- S_cerevisiae300050 -------------------------------------------------- C_porcellus300321 -------------------------------------------------- C_porcellus300945 -------------------------------------------------- D_rerio300117 T------------------------------------------------- D_rerio300215 -------------------------------------------------- D_melanogaster300114 -------------------------------------------------- E_telfairi300768 -------------------------------------------------- E_caballus300317 -------------------------------------------------- E_europaeus300644 -------------------------------------------------- E_europaeus300645 -------------------------------------------------- G_gallus300100 -------------------------------------------------- G_gorilla300391 -------------------------------------------------- H_sapiens300669 -------------------------------------------------- L_africana300479 -------------------------------------------------- M_mulatta300019 -------------------------------------------------- M_mulatta300585 -------------------------------------------------- M_murinus300472 -------------------------------------------------- M_domestica300078 -------------------------------------------------- M_musculus300771 -------------------------------------------------- M_lucifugus300629 -------------------------------------------------- O_anatinus304276 -------------------------------------------------- O_cuniculus300403 -------------------------------------------------- O_garnettii300620 -------------------------------------------------- P_troglodytes300529 -------------------------------------------------- P_pygmaeus300589 -------------------------------------------------- R_norvegicus301006 -------------------------------------------------- S_araneus300195 -------------------------------------------------- S_tridecemlineatus300305 -------------------------------------------------- T_nigroviridis300103 -------------------------------------------------- T_belangeri300409 ATCAAAATGACTTTCGTTCTTCTGAGTCTGCTGAAGCCATGTTTCGATAC O_cuniculus300452 -------------------------------------------------- O_latipes300061 -------------------------------------------------- O_latipes300062 -------------------------------------------------- P_troglodytes300147 -------------------------------------------------- P_troglodytes300237 -------------------------------------------------- P_troglodytes300646 -------------------------------------------------- P_troglodytes300647 -------------------------------------------------- P_pygmaeus300308 -------------------------------------------------- P_pygmaeus300319 -------------------------------------------------- P_pygmaeus300648 -------------------------------------------------- P_pygmaeus300649 -------------------------------------------------- R_norvegicus300881 -------------------------------------------------- S_cerevisiae300071 -------------------------------------------------- S_araneus300205 -------------------------------------------------- S_araneus301002 -------------------------------------------------- S_araneus301003 -------------------------------------------------- T_nigroviridis300066 -------------------------------------------------- T_nigroviridis300067 -------------------------------------------------- T_belangeri300200 -------------------------------------------------- T_belangeri300315 -------------------------------------------------- X_tropicalis300079 -------------------------------------------------- X_tropicalis300080 -------------------------------------------------- X_tropicalis300081 -------------------------------------------------- D_melanogaster300221 -------- S_cerevisiae300050 -------- C_porcellus300321 -------- C_porcellus300945 -------- D_rerio300117 -------- D_rerio300215 -------- D_melanogaster300114 -------- E_telfairi300768 -------- E_caballus300317 -------- E_europaeus300644 -------- E_europaeus300645 -------- G_gallus300100 -------- G_gorilla300391 -------- H_sapiens300669 -------- L_africana300479 -------- M_mulatta300019 -------- M_mulatta300585 -------- M_murinus300472 -------- M_domestica300078 -------- M_musculus300771 -------- M_lucifugus300629 -------- O_anatinus304276 -------- O_cuniculus300403 -------- O_garnettii300620 -------- P_troglodytes300529 -------- P_pygmaeus300589 -------- R_norvegicus301006 -------- S_araneus300195 -------- S_tridecemlineatus300305 -------- T_nigroviridis300103 -------- T_belangeri300409 TGAGAAGG O_cuniculus300452 -------- O_latipes300061 -------- O_latipes300062 -------- P_troglodytes300147 -------- P_troglodytes300237 -------- P_troglodytes300646 -------- P_troglodytes300647 -------- P_pygmaeus300308 -------- P_pygmaeus300319 -------- P_pygmaeus300648 -------- P_pygmaeus300649 -------- R_norvegicus300881 -------- S_cerevisiae300071 -------- S_araneus300205 -------- S_araneus301002 -------- S_araneus301003 -------- T_nigroviridis300066 -------- T_nigroviridis300067 -------- T_belangeri300200 -------- T_belangeri300315 -------- X_tropicalis300079 -------- X_tropicalis300080 -------- X_tropicalis300081 --------