Family: SnoR86

CLUSTAL W (1.83) multiple sequence alignment C_familiaris300330 --AAGTAAATTTTCTAAGTGTCTGATGATGAA-TTTCATAGGGCAGATTC C_porcellus300826 --ATAAATGTTTTCTAAGTGTCTAATGATGAG-TTTCATAGGGCAGATTC D_novemcinctus300520 ------AAATTTTCCAAGTGTCTACTGATGAA-TTTCATAGGGCAGATTC E_caballus300260 --AAATAAGTTTTCTAAGTGTCTGATGATGAA-TTTCATAGGGCAGATTC E_europaeus300341 --AAATTAGATTTTTAAGTGTCTAATGATGAA-TTTCATAGGGCAGATTC F_catus300308 --AAATAAGTTTTCTAAGTGTCTAATGATGAA-GTTCATAGGGCAGATTC G_gorilla300986 --TTATAAGTTTTCTAAGTGTCTAATGATGAA-TTTCATAGGGCAGATTC H_sapiens300575 ------AAGTTTTCTAAGTGTCTAATGATGAA-TTTCATAGGGCAGATTC L_africana300518 --AAATAAGTTTTCTTAGTGTCTAATGATGAA-TTTCATAGGGCAGATTC M_mulatta300677 --TTATAAGTTTTCTAAGTGTCTAATGATGAA-TTTCATAGGGCAGATTC M_murinus300523 --AAATAAGTTTTCTAAGTGTCTAATGATGAA-TTTCATAGGGCAGATTC M_domestica300120 --TTTTGAGTTTTCTAAGTGTCTCATGATGAAATTTCATAGGGCAGATTC M_musculus300974 -AAATAATGTTTT-TAAGTGTCTAGTGATGAA-TTTCATAGGGCAGATTC M_lucifugus300792 -TAATGA-GTTTTCTGAGTGTCTAATGATGAA-TTTCATAGGGCAGATTC O_anatinus304529 --AATTAAAGTGCTAAAGTGTCTAATGATGAGGACTCATAGGGCAGATTC O_cuniculus300436 --AATTAAGTTTTCCAAGTGTCTCATGATGAA-TTTCATAGGGCAGATTC O_cuniculus300469 AGAATGAGGTGTTTCCTGTGTT--ATGATGAA-TTTCAGAGGGCAGATTC P_troglodytes300572 --TTATAAGTTTTCTAAGTGTCTAATGATGAA-TGTCA--GGGCAGATTC R_norvegicus300941 --AATAATGTTTTCTAAGTGTCTAGTGATGAA-TTTCATAGGGCAGATTC S_araneus300890 --AAATAAGTTTTTAAAGTGTCTAATGATGAA-TTTCATAGGGCAGATTC S_tridecemlineatus300314 --GAATATGTTTTCTAAGTGTCTAATGATGAG-TTTCATAGGGCAGATTC T_belangeri300295 --AATTAAGTTTTCTAAGTGTCTGATGATGAA-TTTCATAGGGCAGATTC T_aestivum300338 -GAGCAAAGGGGCCTGA---TTAAGTGGCGAATCTTTGCATTGAAGGTTG T_aestivum300339 -GAGCAAAGGGGCCTGA---TTTGGTGGCGAATCTTTGCATTGAAGGTTG T_aestivum300343 -GAGCAAAGGGGCCTGA---TA-AGTGGTGAATCTTTGCATTGAAGGTTG T_aestivum300342 -GAGCAAAGGGACCTG----TATAGTGGTGAATCTTTGCATTGAAGGTTG T_aestivum300340 -GAGCAAAGGGGCCTGA---TA-AGTGGTGAATCTTTGCATTGAAGGTTG T_dicoccoides300005 -GAGCAAAGGGGCCTGA---TA-AGTGGTGAATCTTTGCATTGAAGGTTG T_dicoccoides300175 -GAGCAAAGGGGCCTGA---TTAAGTGGCGAATCTTTGCATTGAAGGTTG T_dicoccoides300176 -GAGCAAAGGGGCCTGA---TATAGTGGCGAATCTTTGCATTGAAGGTTG T_dicoccoides300177 -GAGCAAAGGGGCCTGA---TTTGGTGGCGAATCTTTGCATTGAAGGTTG T_dicoccoides300178 -GAGCAAAGGGACCTG----TATAGTGGTGAATCTTTGCATTGAAGGTTG T_dicoccoides300179 -GAGCAAAGGGGCCTGA---TA-AGTGGTGAATCTTTGCATTGAAGGTTG T_dicoccoides300003 -GAGCAAAGGGACCTGA---TATAGTGGTGAATCTTTGCATTGAAGGTTG T_dicoccoides300002 -GAGCAAAGGGGCCTGA---TTTGGTGGCGAATCTTTGCATTGAAGGTTG T_dicoccoides300000 -GAGCAAAGGGGCCTGA---TATAGTGGCGAACCTTTGCATTGAAGGTTG T_dicoccoides300004 -GAGCAAAGGGGCCTGA---TG-AGTGGTGAATCTTTGCATTGAAGGTTG * ** ** * * ** ** C_familiaris300330 TGAGGTGAAAATTGTATTCATCATTGATAGTCCTATTA--TGGAATCTGA C_porcellus300826 TGAGGTGAAAATTTAGTTCATCATTGATACTCTTTCTA--TGGAATCTGA D_novemcinctus300520 TGAGGTGAAA-TTTAATTCATCATTGATACTCCTACTG--TGGAATCTGA E_caballus300260 TGAGGTGAAAATTTAATTCATCACTGATAGTCCTACTA--TGGAATCTGA E_europaeus300341 TGAGATGAAAATTAAATTCATCACTGATACTTCTACTG--TGAAATCTGA F_catus300308 TGAGGTGAAAATTTCATTCATCACTGATACTCCT-CTA--TGGAATCTGA G_gorilla300986 TGAGGTGAAAATTTAATTCATCACTGATACTCCTACTA--TGGAATCTGA H_sapiens300575 TGAGGTGAAAATTTAATTCATCACTGATACTCCTACTG--TGGAATCTGA L_africana300518 TGAGGTGAAAATTTAATTCATCATTGATACTCCTACTA--TGGAATCTGA M_mulatta300677 TGAGGTGAAAATTTAATTCATCACTGATAGTCCTACTA--TGGAATCTGA M_murinus300523 TGAGGTGAAAATGTAATTCATCATTGATACCGCTACTA--TGGAATCTGA M_domestica300120 TGAGATGGGAATTGAATTCATCACTGATAAATATTCTG--TGAAATCTGA M_musculus300974 TGAGGTGAAAATTTAGTTCATCATTGATTGTCCTATTA--TGAAATCTGA M_lucifugus300792 TGAGGTGAAAATCTAATTCACCATTGATACTCCTACTA--TGGAGTCTGA O_anatinus304529 TGAGGTGAGCACTGAACTCATCACTGATAATTGTTTGA--TGCGATCTGA O_cuniculus300436 TGAGGTGAAAATTTAGTTCATCGTTGATACCCCTACTA--TGGATTCTGA O_cuniculus300469 TGATGTGAAACTTTAATTCATCATTGATATCC-TACTA--TGGATTCTCA P_troglodytes300572 TGAGGTGAAAATTTAATTCATCACTGATACTCCTACTA--TGGAATCTGA R_norvegicus300941 TGAGGTGAAAATTTAATTCATCATTGATTGTCCTATTA--TGAAATCTGA S_araneus300890 TGAGATGAAAATTGAATTCATCACTGATACTTGTACTG--TGAAATCTGA S_tridecemlineatus300314 TGAGATGAAAATTTACTTCATCATTGATACTCCTACTA--TGAAATCTGA T_belangeri300295 TGAGGTGAAAACTTAATTCATCATTGATCCTCCTACTA--TGGAATCTGA T_aestivum300338 GCGATAGCGAATGCAGTTCTCCG-TGCCACTCAGACTTGCTCTGCTGTGA T_aestivum300339 GCGATACAGAATGCAGTTCTCCG-TGCCGCTCAGATTTTCTATGCTATGA T_aestivum300343 GCGATACAGAATGCAGTTCTCCG-TGCTGCTCAAATTTTCTATGCTGTGA T_aestivum300342 GCAAAAACGAATGCAGTTCTCCG-TGCCGCTCAGACTTGCTCTGCTGTGA T_aestivum300340 GCAATAACAAATGCAGTTCTCCG-TGCCGCTCAGACTT-CTCTGCTGTGA T_dicoccoides300005 GCGATAGCGAGTGCAGTTCTCCG-TGCCGCTCAGACTTGCTCTGCTGTGA T_dicoccoides300175 GCGATAGCGAATGCAGTTCTCCG-TGCCACTCAGACTTGCTCTGCTGTGA T_dicoccoides300176 GCGATAACAAGTGTAGTTCTCCG-TGCCGCTTAGATTTTCTGTGCTCTGA T_dicoccoides300177 GCGATACAGAATGCAGTTCTCCG-TGCCGCTCAGATTTTCTATGCTATGA T_dicoccoides300178 GCAAAAACAAATGCAGTTCTCCG-TGCCGCTCAGACTTGCTCTGCTGTGA T_dicoccoides300179 GCGATACAGAATGCAGTTCTCCG-TGCTGCTCAAATTTTCTATGCTGTGA T_dicoccoides300003 GCGATAGCGAATGCAGTTCTCCG-TGCCGCTCAGACTTGCTCTGCTGTGA T_dicoccoides300002 GCGACACAGAATGCAGTTCTCCG-TGCCGCTCAGATTTTCTATGCTATGA T_dicoccoides300000 GCGATAACAAGTGCAGTTCTCCG-TGCCGCTTAGATTTTCTGTGCTATGA T_dicoccoides300004 GCTATACAGAATGCGGTTCTCCG-TGCCGCTCAAATTTTCTATGCTGTGA ** * ** * * * * C_familiaris300330 AGACACTTGGAAACCG---------------------------------- C_porcellus300826 AGACACTTCAAACCTA---------------------------------- D_novemcinctus300520 AGACACTTGAAAACCT---------------------------------- E_caballus300260 AGACGCTTGAAAATCT---------------------------------- E_europaeus300341 AGACACTTGAAAAACT---------------------------------- F_catus300308 AGACACTTGAAAACCT---------------------------------- G_gorilla300986 AGACACTTGAAAACCT---------------------------------- H_sapiens300575 AGACACTTGAAAACGT---------------------------------- L_africana300518 AGACACTTGAAAACCT---------------------------------- M_mulatta300677 AGACACTTGAAAACCT---------------------------------- M_murinus300523 AGACACTTGAAAACCT---------------------------------- M_domestica300120 AGACACATGAAAAACT---------------------------------- M_musculus300974 AGACACTTGAAAACTA---------------------------------- M_lucifugus300792 AGACACTTGAAAACCT---------------------------------- O_anatinus304529 AGACACTTGAAAGTCT---------------------------------- O_cuniculus300436 AGACACTTGAAAACCT---------------------------------- O_cuniculus300469 AGACACTAGAAAAAAA---------------------------------- P_troglodytes300572 AGACACTTGAAAACCT---------------------------------- R_norvegicus300941 AGACACTTGAAAACTA---------------------------------- S_araneus300890 AGACACTTAAAAACCT---------------------------------- S_tridecemlineatus300314 AGACACTTGAAAACCT---------------------------------- T_belangeri300295 AGACACTTGAAAGCATCCACTCAGACTTGCTCTGCTGTGATGGCCTCGAA T_aestivum300338 TGGCCTCGAACAATCTGCTACATA-------------------------- T_aestivum300339 CGGCCTCGAACAATCTGCTACATT-------------------------- T_aestivum300343 CGGCCTCGAACAATCTGCTACATC-------------------------- T_aestivum300342 CGGCCTCGAACAATCTGCTACATC-------------------------- T_aestivum300340 CGGCCTCGAACAATCTGCTACATC-------------------------- T_dicoccoides300005 CGGCCTCGAACAATCTGCTACATA-------------------------- T_dicoccoides300175 TGGCCTCGAACAATCTGCTACATA-------------------------- T_dicoccoides300176 TGGCCTCGAACAATCTGCTACATC-------------------------- T_dicoccoides300177 CGGCCTCGAACAATCTGCTACATG-------------------------- T_dicoccoides300178 CGGCCTCGAACAATCTGCTACATC-------------------------- T_dicoccoides300179 CGGCCTCGAACAATCTGCTACATC-------------------------- T_dicoccoides300003 TGGCCTCGAACAATCTGCTACATA-------------------------- T_dicoccoides300002 CGGCCTCGAACAATCTGCTACATG-------------------------- T_dicoccoides300000 CGGCCTCGAACAATCTGCTACACC-------------------------- T_dicoccoides300004 CGGCCTCGAACAATCTGCTACATC-------------------------- * * * C_familiaris300330 -------------- C_porcellus300826 -------------- D_novemcinctus300520 -------------- E_caballus300260 -------------- E_europaeus300341 -------------- F_catus300308 -------------- G_gorilla300986 -------------- H_sapiens300575 -------------- L_africana300518 -------------- M_mulatta300677 -------------- M_murinus300523 -------------- M_domestica300120 -------------- M_musculus300974 -------------- M_lucifugus300792 -------------- O_anatinus304529 -------------- O_cuniculus300436 -------------- O_cuniculus300469 -------------- P_troglodytes300572 -------------- R_norvegicus300941 -------------- S_araneus300890 -------------- S_tridecemlineatus300314 -------------- T_belangeri300295 CAATCTGCTACATA T_aestivum300338 -------------- T_aestivum300339 -------------- T_aestivum300343 -------------- T_aestivum300342 -------------- T_aestivum300340 -------------- T_dicoccoides300005 -------------- T_dicoccoides300175 -------------- T_dicoccoides300176 -------------- T_dicoccoides300177 -------------- T_dicoccoides300178 -------------- T_dicoccoides300179 -------------- T_dicoccoides300003 -------------- T_dicoccoides300002 -------------- T_dicoccoides300000 -------------- T_dicoccoides300004 --------------