Family: SnoR77

CLUSTAL W (1.83) multiple sequence alignment A_tauschii300233 --------------------------------------GGAGGAAGGAAGCATGGTAATG A_tauschii300241 --------------------------------------AGAGGAAGGATGCCTGGTAATG A_tauschii300250 --------------------------------------AGAGGAAGGAAGTATGGTAATG A_tauschii300576 --------------------------------------AAAGGAAGGAAGCATGGTAATG A_thaliana300005 --------------------------------------GAATGATTGTAGCATGGTACTG A_thaliana300197 --------------------------------------TAATGAATGTAGCATGGTACTG A_thaliana300251 AGCCGTCTACAATTAAGCCGATGCTCTGGATTAAAATAGAATGAAGGAAGCATGGTACTG O_sativa300242 --------------------------------------AGAGGAAGGAAGCATGGTAGTG T_aestivum301253 --------------------------------------GGAGGAAGGAAGCATGGTACTG T_aestivum301419 --------------------------------------CGAGGAAGGAAGCATGGTAATG T_aestivum301449 --------------------------------------AGAGGAAGGAAGTATGGTAATG T_aestivum301451 --------------------------------------AGAGGAAGGATGCCTGGTAATG T_dicoccoides300989 --------------------------------------GGAGGAAGGAAGCATGGTAATG T_aestivum300279 -------------AGGCAGCCCTTTTTTCTGATTACAATGGCAATGGAGGTGTTGCATT- T_aestivum300280 -------------AGGCAGCCTCTTTATC--ATTACAGTGGCATTGGAGGTGTTGCGTT- T_aestivum300281 -------------AGGCAGCCTCTTTATC--ATTACAGTGGCATTGGAGGTGTTGCGTT- T_aestivum300301 --GGAGAGCCCTGCCCGTGCGAATGTCTCTGATTTCAGTGG-AATGGAGGTGTTGTGTT- T_aestivum300305 -------------AGGCAGCCCTTTTGTCTGATTACAATGGCAATGGAGGTGTTGCATT- T_aestivum300306 -------------AGGCAGCCTCTTTGTCCCAAT-CAATGGCAATGGTGGTGTTGCGTT- T_aestivum300307 -------------AGGCAGCCCCTATGCCCCATT-CAATGGCAATGGAGGTGTTTCGTT- T_aestivum300308 -------------AGGCAGCCTCTTTACC--ATTACAGTGGCATTGGAGGTGTTGCGTT- T_aestivum300309 -------------AGGCAGCCTCTTTACC--GTTACAGTGGCATTGGAGGTGTTGCGTT- T_aestivum300030 -------------AGGCAGCCTCTTTGTCC-ATTACAATGGCAATGGAGGTGTTGCGTT- T_aestivum300031 -------------AGGCAGCCCCTATGCCCCATTACAATGGCAATGGAGGTGTTGCGTT- T_aestivum300032 -------------AGGCAGCCTCTTTACC--GTTACAGTGGCATTGGAGGTGTTGCGTT- T_aestivum300033 -------------AGGCAGCCTCTTCACC--ATTGCAGTGGCATTGGAGGTGTTGCGTT- T_aestivum300036 -------------AGGCATCCCCTTTGCCTGATTACGATGGCTATGGAGGTGTAACTTTA T_aestivum300037 -------------AGGCAGCCCTTTTGTCTGATTACAATGGTAATTGTGGTGTTGCATT- T_aestivum300059 -------------AGGCCGCCCCTTTGTCTAATTACAATGTCTATGGAGGTGTTATGTT- T_aestivum300199 -------------AGGCAACCTCTTTGTCTAATTACAATGTCTATGGAGGTATTGCATT- T_aestivum300276 -------------AGGCAGCCCTTTTGTCC-ATTACAATGGCAATGGAGGTGTTGCGTT- T_aestivum300277 -------------AGGCAGCCCTTTTGTCC-ATTACAATGGCAATGGAGGTGTTGCGTT- T_aestivum301433 -----------------------------------------------AGGTGTTGTGTT- T_dicoccoides300048 -------------AGGCCGCCCCTTTGTCTAATTACAATGTCTATGGAGGTGTTATGTT- * * * A_tauschii300233 -------TGCACGGAGAGT-ACCGATACCTGTGGTCT-GCATATGTCTGCTCGTCTTGAC A_tauschii300241 -------TGCATAGAGATTGACTGAAC---TCAGTCT-GCAT--GTCTGCTCGCCCTGAT A_tauschii300250 -------TGCATGGAGATTGACT--------TGGTCT-GCAT--GTCTGCTCGCCCTGAC A_tauschii300576 -------TGCACGGAGATCGACTGAA----TTGGTCT-GCAT--GTCTGCTCGCCCTGAC A_thaliana300005 -------TGCACGGAAACTGAATCATG-----GGTTTCAAATGTCTGTGCCTGCTCTGAG A_thaliana300197 -------TACACGGAAACTGAACTATG-----GATC---GACATGTCTGCCATCTCTGAT A_thaliana300251 -------TGCACGGAAACTAAACTATA-----GATC---GACATGTCTGCCATCTCTGAT O_sativa300242 -------TGTACAGAGATGGATTGATTTTGTTGGTCT-GCAT--GTCTGCCTGCGGTGAT T_aestivum301253 -------TGCACGGAGAGT-ACCGATACAGGTGGTCT-GCATATGTCTGCTCGTCTTGAC T_aestivum301419 GGCGTGCTGCACGCAGATTGACTGAAC---TCGGTCT-GCAT--GTCTGCTCGCCCTGAC T_aestivum301449 -------TGCATGGAGATTGACT--------TGGTCT-GCAT--GTCTGCTCGCCCTGAC T_aestivum301451 -------TGCATAGAGATTGACTGAAC---TCAGTCT-GCAT--GTCTGCTCGCCCTGAT T_dicoccoides300989 -------TGCACGGAGAGT-ACCGATACAGGTGGTCT-GCATATGTCTGCTCGTCTTGAC T_aestivum300279 --------GCTCGGAGAGTGAATCTTC----TGCTCTTCAGATTAGCCGAGGTGGATGTT T_aestivum300280 --------GCTCGGATAGTAAACCTTT----TGCTCTTCAGATTAGCTGAGGGGGAGGCT T_aestivum300281 --------GCTCGGATAGTAAACCTAT----TGCTCTTCAGATTAGCTGAGGGGGAGGCT T_aestivum300301 --------GATTAGAGATTAAATCTTC----TGCTCTTCATATTAGCTGAGGGGCAGGCT T_aestivum300305 --------GCTCGGAGAGTGAATCTTC----TGCTCTTCAGATTAGCTGAGGGGGAGGCT T_aestivum300306 --------GCTCGGAGAGTAAATCTTC----TGCTCTTCAGATTAGCTGAGGGGGTGGCT T_aestivum300307 --------GCTCCGAGAGTGAATCTTC----TGCTCTTCAGATTAGCTGAGGGGAAGGCT T_aestivum300308 --------GCTCGGAGAGTAAACCTTT----TGCTCTTCAGATTAGCTGAGGGGGCGGCT T_aestivum300309 --------GCTCGGAGAGTAAACCTTT----TGCTCTTCAGATTAGCTGAGGGGGAGGCT T_aestivum300030 --------GCTCTGAGAGTAAATCTTC----TGCTCTTAAGATTAGCTGAGGGGGAGGAT T_aestivum300031 --------GCTCGGAGAGTAAACCTTC----TGCTCTTCAGATTAGCTGAGGGGGAGGCT T_aestivum300032 --------GCTCGGATAGTGAACCTTT----TGCTCTTCAGATTAGCTGAGAGGGAGGCT T_aestivum300033 --------GCTCGGATAGTAAACCTTT----TGCTCTTCAGATTAGCTGAGGGGGAGGCT T_aestivum300036 --------GCTCGAAGAGTAAATCTTC----TGCTCTTAAGATTATCTGTGGTGGAGGTT T_aestivum300037 --------GCCCGGAGAGTGAATCTTC----TGCTCTTCAGATTAGCTGAGGGG-AGGCT T_aestivum300059 --------GCTTGGAGATTAAATCTTC----AGCTCTTCAGATTAGCTGAGGGGGCCGCT T_aestivum300199 --------GCTAGGAGATTAAATCTTC----TGCTCTTCAGATTAGCCGAGGGAGGTGCT T_aestivum300276 --------GCTCGGAGATTAAATCTTC----TGCTCTTCAGATTAGCTGAGTGGGAGGCT T_aestivum300277 --------GCTCGGAGATTAAAT-TTC----TGCTCTTCAGATTAGCTGAGTGGGAGGCT T_aestivum301433 --------GATTAGAGATTAAATCTTC----TGCTCTTTAGATTAGCTGAGGGGCAGGCT T_dicoccoides300048 --------GCTTGGAGATTAAATCTTC----AGCTCTTCAGATTAGCTGAGGGGGCCGCT * * * * * * A_tauschii300233 GCCTTC----GGGCTTTGATCTCGCGGGCCTGGATTTGACCAACATTC------------ A_tauschii300241 GCCTTC----GGGCTTTACTCTTGCTGGCCTGTATTTGACCCACACTA------------ A_tauschii300250 GCCTTT----GGGCTTTGATCTCGCGGGCCTGGATTTGACCCATACTC------------ A_tauschii300576 GCCTTC----GGGCTTTGATCTCGCGGGCCTGGATTTGACCCACACTA------------ A_thaliana300005 TTCCTTATTGGTTCTTTGATTT-GCGGGCCTGATTTGAACCCACATTT------------ A_thaliana300197 TTT--------TTCCCTGATTA-GACGGCCTGGTTTAGATCCACATTC------------ A_thaliana300251 TTT--------T--CGTGATGA-GACGGCCTGGTTTAGATCTACATTC------------ O_sativa300242 GCCTTC----GGGCTTTGATCTCGCGGGCCTGGATTTGACCCACACTT------------ T_aestivum301253 GCCTTC----GGGCTTTGATCTCGCGGGCCTGGATTTGACCAACATTC------------ T_aestivum301419 GCCCTC----GGGCTTTGATCT-GCGGACCTAGATTTGACTCAGACTT------------ T_aestivum301449 GCCTTT----GGGCTTTGATCTCGCGGGCCTGGATTTGACCCATACTC------------ T_aestivum301451 GCCTTC----GGGCTTTACTCTTGCTGGCCTGTATTTGACCCACACTA------------ T_dicoccoides300989 GCCTTC----GGGCTTTGATCTCGCGGGCCTGGATTTGACCAACATTCATGGAGGTGTTG T_aestivum300279 CCGGCT-TCCCTCCGTGAA-GCTAGTCTAGTAGTCTTAA-GAACATT------------- T_aestivum300280 CCTGCT-TCCCTCCCTGAAAGCTGGTCTAGTAGTCTTAA-GAACATT------------- T_aestivum300281 CCTGCT-TCCCTCCCTGAA-GCTGGTCTAGTAGTCTTAA-GAACATT------------- T_aestivum300301 CTGGCT-TCCCCCTTTGAA-GCTTGCCTAGTAGTCTTAA-GAACATT------------- T_aestivum300305 CTGGCT-TCCCTCTCTGAA-GCTTGTCTAGTAGTCTTAA-GAACATT------------- T_aestivum300306 -CTGCT-TCCCTCCTTGAA-GCTTGTCTAGTAGTCTTAA-GAACATC------------- T_aestivum300307 -CTGCT-TCCCTCCTTGAA-GCTTGTCTAGTAGTCTTAA-GAACATC------------- T_aestivum300308 ACGGCT-TCCCTCCCTGAA-GCTGGTCTAGTAGTCTTAA-GAACATT------------- T_aestivum300309 -CTGCT-TCCCTCCCTGAA-GCTGGTCTAGTAGTCTTAA-GAACATT------------- T_aestivum300030 -CTGCT-TCCCTCCTTGAA-GCTTGTCTAGTAGTCTTAA-GAACATC------------- T_aestivum300031 -CTGCT-TCCCTCCTTGAA-GCTTGTCTAGTAGTCTTAA-GAACATC------------- T_aestivum300032 TTGGCT-TCCCTCCGTGAA-GCTGGTCTAGTAGTCTTAA-GAACATC------------- T_aestivum300033 ATGGCT-TCCCTCCCTGAA-GCTGGTCTAGTAGTCTTAA-GAACATT------------- T_aestivum300036 CCT------------TGAA-GCTGGTCTAGTAGTCTTAA-GAACATT------------- T_aestivum300037 CTGGCT-TCCCTCTCTGAA-GCTTGTCTAGTAGTCTTATTAAACAAG------------- T_aestivum300059 --TGCT-TCCCTCTTCGAA-GTTGGTCTAGTAGTCTTAA-GAACAAT------------- T_aestivum300199 --TGCT-GATATAATGGAA-AATC-TTTATTAG-CTTAA-GAGCAAT------------- T_aestivum300276 -CTGCT-TCCCTCGTTGAA-GCTTGTCTAGTAGTCTTAA-GAACATC------------- T_aestivum300277 -CTGCT-TCCCTCGTTGAA-GCTTGTCTAGTAGTCTTAA-GAACATC------------- T_aestivum301433 CTGGCT-TCCCACTCTGAA-GCTTGCCTAGTAGTCTTAA-GAACATT------------- T_dicoccoides300048 --TGCT-TCCCTCTTCGAA-GTTGGTCTAGTAGTCTTAA-GAACAAT------------- * * * A_tauschii300233 ------------------------------------------------------------ A_tauschii300241 ------------------------------------------------------------ A_tauschii300250 ------------------------------------------------------------ A_tauschii300576 ------------------------------------------------------------ A_thaliana300005 ------------------------------------------------------------ A_thaliana300197 ------------------------------------------------------------ A_thaliana300251 ------------------------------------------------------------ O_sativa300242 ------------------------------------------------------------ T_aestivum301253 ------------------------------------------------------------ T_aestivum301419 ------------------------------------------------------------ T_aestivum301449 ------------------------------------------------------------ T_aestivum301451 ------------------------------------------------------------ T_dicoccoides300989 CATTGCTCGGAGAGTGAATCTTCTGCTCTTCAGATTAGCCGAGGTGGATGTTCCAGCTTC T_aestivum300279 ------------------------------------------------------------ T_aestivum300280 ------------------------------------------------------------ T_aestivum300281 ------------------------------------------------------------ T_aestivum300301 ------------------------------------------------------------ T_aestivum300305 ------------------------------------------------------------ T_aestivum300306 ------------------------------------------------------------ T_aestivum300307 ------------------------------------------------------------ T_aestivum300308 ------------------------------------------------------------ T_aestivum300309 ------------------------------------------------------------ T_aestivum300030 ------------------------------------------------------------ T_aestivum300031 ------------------------------------------------------------ T_aestivum300032 ------------------------------------------------------------ T_aestivum300033 ------------------------------------------------------------ T_aestivum300036 ------------------------------------------------------------ T_aestivum300037 ------------------------------------------------------------ T_aestivum300059 ------------------------------------------------------------ T_aestivum300199 ------------------------------------------------------------ T_aestivum300276 ------------------------------------------------------------ T_aestivum300277 ------------------------------------------------------------ T_aestivum301433 ------------------------------------------------------------ T_dicoccoides300048 ------------------------------------------------------------ A_tauschii300233 ------------------------------------ A_tauschii300241 ------------------------------------ A_tauschii300250 ------------------------------------ A_tauschii300576 ------------------------------------ A_thaliana300005 ------------------------------------ A_thaliana300197 ------------------------------------ A_thaliana300251 ------------------------------------ O_sativa300242 ------------------------------------ T_aestivum301253 ------------------------------------ T_aestivum301419 ------------------------------------ T_aestivum301449 ------------------------------------ T_aestivum301451 ------------------------------------ T_dicoccoides300989 CATCCGTGAAGCTAGTCTAGTAGTCTTAAGAACATT T_aestivum300279 ------------------------------------ T_aestivum300280 ------------------------------------ T_aestivum300281 ------------------------------------ T_aestivum300301 ------------------------------------ T_aestivum300305 ------------------------------------ T_aestivum300306 ------------------------------------ T_aestivum300307 ------------------------------------ T_aestivum300308 ------------------------------------ T_aestivum300309 ------------------------------------ T_aestivum300030 ------------------------------------ T_aestivum300031 ------------------------------------ T_aestivum300032 ------------------------------------ T_aestivum300033 ------------------------------------ T_aestivum300036 ------------------------------------ T_aestivum300037 ------------------------------------ T_aestivum300059 ------------------------------------ T_aestivum300199 ------------------------------------ T_aestivum300276 ------------------------------------ T_aestivum300277 ------------------------------------ T_aestivum301433 ------------------------------------ T_dicoccoides300048 ------------------------------------