Family: SnoR7

CLUSTAL W (1.83) multiple sequence alignment C_familiaris300438 --------------------------------------------TACATG D_rerio300294 ---------------------------------------------CACAC D_rerio300295 ---------------------------------------------CACAC E_telfairi300566 -------------------------------------------------- E_telfairi300744 --------------------------------------------AACATG E_caballus300268 --------------------------------------------AACATG E_europaeus300446 --------------------------------------------AACATG F_catus300227 --------------------------------------------AACATG G_gallus300026 --------------------------------------------CACATG G_gorilla300023 --------------------------------------------AACATG H_sapiens300692 --------------------------------------------AACATG M_mulatta300626 --------------------------------------------AACATG M_murinus300490 --------------------------------------------AACATG M_domestica300167 --------------------------------------------AACATG M_musculus300847 --------------------------------------------AACATG M_lucifugus300635 --------------------------------------------AACATG M_lucifugus300789 --------------------------------------------AACATG O_anatinus304466 --------------------------------------------AACATG O_garnettii300706 --------------------------------------------AACATG P_troglodytes300651 --------------------------------------------AACATG P_pygmaeus300650 --------------------------------------------AACATG R_norvegicus300884 --------------------------------------------AACATG S_araneus300159 ------------------------------------------------TG S_araneus300187 --------------------------------------------CTTATG S_araneus300447 --------------------------------------------AACATG S_araneus300593 --------------------------------------------AACATG S_araneus300782 -------------------------------------------------- S_araneus300934 --------------------------------------------AACATA S_araneus301014 ----------------------------------------------AATG S_tridecemlineatus300269 AACATGCTTCCTTAGATCCACCTTTGTGGATGAGTCTTGGGCTGAGTTCT O_garnettii300105 -------------------------------------------------- O_garnettii300127 -------------------------------------------------- O_garnettii300142 -------------------------------------------------- O_garnettii300148 -------------------------------------------------- C_familiaris300438 CTTCCTTAGATC--CACCTTTGTGGATGCTAGT-CTTGAACTGAGTTCTA D_rerio300294 GTTCCTTAGATC--CGCCTCTGGGGAGCGTCAGTGCTCTTCT----TCTG D_rerio300295 GTTCCTTAGATC--CGTCTCTGGGGAGCGTCAGTGCTCTTCT----TCTG E_telfairi300566 CTTCCTTAGATC--CACCTTTGTGGA-TGTTAATTTTGAACTGAGTTCTA E_telfairi300744 CTTCCTTAGATC--CACCTTTGTGGATGTTAAT-TTTGAACTGAGTTCTA E_caballus300268 CTTCCTTAGATC--CACCTTTGTGGGTGTTAGT-CTTGAACTGTGTTCTA E_europaeus300446 CTGCCTTAGATC--CACCTTTGTGGATGTCAGT-CTTGAACTGAGTTCTG F_catus300227 CTTCCTTAGATC--CACCTTTGTGGATGCTAAT-CTTGAACTGAGTTCTA G_gallus300026 CTC-CTTAGATC--CATCTTTGTGAGT---ATC-TTTGTGCTGAGTTCTG G_gorilla300023 CTTCCTTAGATC--CACCTTTGTGGATG--AAT-CTTGAACTGAGTTCCA H_sapiens300692 CTTCCTTAGATC--CACCTTTGTGGATG--AAT-CTTGAACTGAGTTCCA M_mulatta300626 CTTCCTTAGATC--CACCTTTGTGGATG--AAT-CTTGAACTGAGTTCCA M_murinus300490 CTTCCTTAGATC--CACCTTTGTGGATG--AAC-TT-GAACTGAGTTCTG M_domestica300167 CTTCCTTAGATC--CACCTTTGTGGATGCCAACTCTTGTTCTGAGTTCTA M_musculus300847 CTTCCTTAGATC--CACCTTTGTGGATG--GGT-CTTGGACTGAGTTCTA M_lucifugus300635 CTTCCTTAGATC--CACCTTTGTGGATGCCAAT-CTTGAACTGAGTTCTA M_lucifugus300789 CTTCCTTAGATC--CACCTTTGTGGATGCCAAT-CTTGAACTGAGTTCTA O_anatinus304466 CTTCCTTAGATC--CACCTTTGTGGTTGCCCAC-CTTGAACTGAGTTCCG O_garnettii300706 CTTCCTTAGATC--CACCTTTGTGGATG--AAT-TTTGAACTGAGTTCCG P_troglodytes300651 CTTCCTTAGATC--CACCTTTGTGGATG--AAT-CTTGAACTGAGTTCCA P_pygmaeus300650 CTTCCTTAGATC--CACCTTTGTGGATG--AAT-CTTGAACTGAGTTCCA R_norvegicus300884 CTTCCTTAGATC--CACCTTTGTGGATG--AAT-CTTGAACTGAGTTCTA S_araneus300159 TTTGCCTTGCACGTGGGCCTACCTGG-----GT-TTGATTCCTGGCATCA S_araneus300187 CTTCCTTAGATC--CACCTTTGTGGATGTCAAT-CTCAAACTGAGTTCTA S_araneus300447 CTTCCTTAGATC--CACCTTTGTGGATGTCAAT-CTTGAACTGAGTTCTA S_araneus300593 CTTCCTTAGATC--CACCTTTGTGGATATCAAT-CTCAAACTGAGTTTTA S_araneus300782 ------TGGATGGTGGGTTGAATTCTT----GT-TTTGTTTTGAATAGGA S_araneus300934 CTTTCTTAGATC-TGGTCTTTGTAGGTGAGAAT-CTTGAACCAGATTCTA S_araneus301014 CTCCCTTAGATCCTAATTTGTGTTTGT---AAT-CTTGAACTAAATTCTA S_tridecemlineatus300269 ACTTGTAAACTTTCTTGTTCCTGTAGTTTCCAGTCAAAGAACATCCGGCA O_garnettii300105 -------------------------------------------ATGGTCA O_garnettii300127 -------------------------------------------------- O_garnettii300142 --------AAACACAAGTTCAAGAATAAAATGATTAAGAATTTTCAGGAA O_garnettii300148 -----------------------------------AGGTAATAGCATTGA C_familiaris300438 CTTG-TAAACATT-TGGTTTCTTGTAGTTCCAGT---CAG-GAAACATCC D_rerio300294 CT------GCTCT-CTGTGTGAGAGCATCAGGGTC--GACCGCAGCTCCC D_rerio300295 CT------GCTCT-CTGTGTGAGAGGATCAGGGTC--GACCGCAGCTCCC E_telfairi300566 CTTG-TAAACTCT-GTGTTTCTTGTGGTTCCAGTC--AAA-GAAGCATCC E_telfairi300744 CTTG-TAAACTTT-GTGTTTCTTGTAGTTCCAGT---CAAAGAAACATCC E_caballus300268 CTTG-TAAACTTC-TTGTTTCTTGTAGTTCCGGT---CAGAGAAACATCC E_europaeus300446 CTCG-CAAACTTC-CTGTTTCTTGTAGTTCCAGT---CA--GAGACATCC F_catus300227 CTTG-TAAACTTT-CTGTTTCTTGTAGTTCCAGT---CAGAGAAACATCC G_gallus300026 CTGG-ATAACTTC--AGTTTCTAGCAGTTCCAGTC---AAAGTTGC--TC G_gorilla300023 CTTG-TAAACTTC-TTGTTTCTTGTGGTTCCAGT---CAAAGAAACATCC H_sapiens300692 CTTG-TAAACTTC-TTGTTTCTTGTGGTTCCAGTAGTCAAAGAAACATCC M_mulatta300626 CTTG-TAAACTTC-TTGTTTCTTGTGGTTCCAGT---CAAAGAAACATCC M_murinus300490 CCCG-TAAACTTC-TTGTTTCTTGTAGTTCCAGT-------CAAACATCC M_domestica300167 CTTGCTAA--CGT-TTGTTTCTTGTAGTTCCAGT---CAA-GAGGCATCC M_musculus300847 CCTG-TAAACTTC-TTGTTTCTTGTGGTTCCAGT---CCAAGAAACGTCC M_lucifugus300635 CTTG-TGAACTTTACTGTTTCTTGTAGTTCCAGT---CAG-GAAACATCC M_lucifugus300789 CTTG-TAAACTTTACTGTTTCTTGTAGTTCCAGT---CAA-GAAACATCC O_anatinus304466 CCAGTTAAACTCT-TTGTTTCTGGTAGTTCCAGT---CAA-GAGGCATCC O_garnettii300706 CTTG-TAAACTTC-TTGTTTCTTGTAGTTCCAGT-------CAAACATCC P_troglodytes300651 CTTG-TAAACTTC-TTGTTTCTTGTGGTTCCAGT---CAAAGAAACATCC P_pygmaeus300650 CTTG-TAAACTTC-TTGTTTCTTGTGGTTCCAGT---CAAAGAAACATCC R_norvegicus300884 CCTG-TAAACTTC-TTGTTTCTTGTAGTTCCAGT---CCAGGAAACATCC S_araneus300159 CATA-TGGTCCATCGAGCCTGCCAGGAGTTATCCATGAGCAAAGAAAGAA S_araneus300187 CTGG-TAAACTTT--GGTTTCCTATAGTTCCCGTG---AAAGAAACATCC S_araneus300447 CTCG-TAAACTTT--GGTTTCTTGTAGTTCCAGTG---AAAGAAACATCC S_araneus300593 CGGG-TAAACTTT--GGTTTCCTGTAGTTCCAGTG---AAAGAAATATCC S_araneus300782 GGAA-AAGCTGTTTTTGTGTTTCTC--CTTATAC-TATGCTCAATCAGCT S_araneus300934 TGTG-TAAATTTT--CATTTCTTCTTGTTTCAGTG---AAAGAAACATCC S_araneus301014 CTCA-TAAATTTT--AATTTCTTGCAGTTCTAGTA---AAAGAAACATCC S_tridecemlineatus300269 ANETTIIGTGTAAAAATTCCTGATCTTCTTATGTGC-TATACAGATAGTT O_garnettii300105 AC-----AT-CAAGACTTGAAGTGAGTCTTATGTGC-TATACAGATAGTT O_garnettii300127 ------------------------------ATGTGC-TATACAAATAGTT O_garnettii300142 AT-----ATATATGAGCAGTGTTATTTCTTATGTG--TATACAAATAGTT O_garnettii300148 AA-----GT-TTTTCTCCTCATTATTTCTTATGTGC-TGTACAAATAGTT C_familiaris300438 AGCAACTTTTTTGGTTGTATAGTCA-AAGGTGCT------TGAGTCATTG D_rerio300294 GCCAGCTTTAC-TGCTGTACCGTCA-GAGGCGCT------TGAGTCATTG D_rerio300295 GCCAGCTTTAC-TGCTGTACCGTCA-GAGGCGCT------TGAGTCATTG E_telfairi300566 GGCAACTTTTT-GGATGTACAGCCA-AAGGTGCT------TGAGTCATTA E_telfairi300744 GGCACCTTTTGTGGTTGTACCCTCTTAAGGTGCT------TGAGTCATTG E_caballus300268 AGCAACTTTTTTGGTTGTATAGTCA-AAGGTGCT------TGAGTCATTG E_europaeus300446 GGCAACTTTTTTGGTTGTACAGTCA-AAGGTGCT------TGAGTCATTG F_catus300227 AGCAACTTCTTCGGTTGTATAGTCA-AAGGTGCT------TGAGTCATTG G_gallus300026 GGCAACTTTTTTGGTTGTACGGTCA-AAGATGCT------TGAGTCATTG G_gorilla300023 AGCAACTTTTTTGGTTGTATAGTCA-AAGGTGCT------TGAGTCATTG H_sapiens300692 AGCAACTTTTTTGGTTGTATAGTCA-AAGGTGCT------TGAGTCATTG M_mulatta300626 AGCAACTTTTTTGGTTGTATAGTCA-AAGGTGCT------TGAGTCATTG M_murinus300490 AGCAACTTTTTTGGTTGTATAGTCA-AAGGTGCT------TGAGTCATTG M_domestica300167 AGCAACTTTACCGGTTGTACTGTCA-AAGGTGCT------TGAGTCATTG M_musculus300847 AGCAACTTTGTTGGTTGTATAGTCG-AAGGTGCT------TGAGTCATTG M_lucifugus300635 AGCAACTTTTT-GGTTGTACAGTCG-AAGGTGCT------TGAGTCATTG M_lucifugus300789 AGCAACTTTTT-TGTTGTACAGTCA-AAGGTGCT------TGAGTCATTA O_anatinus304466 GGCAACTTCTTTGGTTGTACAGTCA-AAGGTGCT------TGAGTCATTG O_garnettii300706 AGCAACTTTTTTGGTTGTATAGTCA-AAGGTGCT------TGAGTCATTG P_troglodytes300651 AGCAACTTTTTTGGTTGTATAGTCA-AAGGTGCT------TGAGTCATTG P_pygmaeus300650 AGCAACTTTTTTGGTTGTATAGTCA-AAGGTGCA------TGAGTCATTG R_norvegicus300884 AGCAACTTTGTTGGTTGTACAGTCA-AAGGTGCT------TGAGTCATTG S_araneus300159 AGGAAGGAAAA-GGTTATATAGTCA-AAGGTGCC------TGAGTCATTG S_araneus300187 AGCAACTTTTTTGGTTGTATAGTCA-AAGGTGCT------TAAGTCATTG S_araneus300447 AGCAACTTTTTTGGTTGTATAGTCA-AAGGTGCT------TGAGTCATTG S_araneus300593 AGCAACTTTTTTGGTTGTATAGTCA-AAGGTGCT------TGAGTCATTG S_araneus300782 AGTCATTCCAT-GGCTTTAAGATTACAATGTACT------TGAGTCATTG S_araneus300934 AGCCCCCTTTTGGGTTGTATAGTCA-AAGGTGCTAGCACATGTGTCACTA S_araneus301014 AGCACCTCTCTTGTTTGTACCGTCA-AAGGTTCT------TGAGTCATGG S_tridecemlineatus300269 GA-AGGTTAATTAGCAGTATAACTATAAATAGTAATGCTGCCAGTCTCCT O_garnettii300105 GA-AGGTTAATTAGCAGTATAACTATAAATAGTAATGCTGCCAGTCTCCT O_garnettii300127 GA-AGGTTAATTATCAGTGTAACTATAAATAGTAATGCGACCAGTCTCCT O_garnettii300142 GA-AGGTTAATTCACAGTATAACTATAAATAGTAATGCTGCCAGTCTCCT O_garnettii300148 GA-AGGTTAATTAGTGGTATAATTATA----GTAATGCTGACAGTCTCCT * *** C_familiaris300438 GCATGTGAGATAAATA-TACCTGCATGTTAGTCTTA-GGTTCTGATAG-A D_rerio300294 GCGTGTGAGATCAGTC-CATCTGCTTACCCAGAATT-CTCTCTGCCCTGA D_rerio300295 GCGTGTGAGATCAGTC-CACCTGCTTACCCAGAATT-CTCTCTGCCCTGA E_telfairi300566 AAGAAAAGAACAAAAT-GAAAGGATGG--TAACATC-AAAGGTATTGAGA E_telfairi300744 GCATGTGAGAGAACTA-TACCTTC-TACTGTTCTTT-GGTTCTGATGG-- E_caballus300268 GCATGTGAGATAAATA-TACCTGCATGTTAGTCTTA-TGTTCTGATAG-A E_europaeus300446 GCATGTGAGAGAAATA-CACCTGCATGTTAGTCTCC-AGTTCTGGTGG-- F_catus300227 GCATGTGAGATAAATA-TACCTGCATGTTAGTCCTA-GGTTCTGATAG-A G_gallus300026 GCATGTGAGAGTAATA-TAACTGCATGTTAGCTTTC-TGTTCTGATAA-A G_gorilla300023 GCATGTAAGAGAAATA-TACCTGCATGTTAGTCTAA-CGTTCTGATAG-A H_sapiens300692 GCATGTAAGAGAAATA-TACCTGCATGTTAGTCTAA-CGTTCTGATAG-A M_mulatta300626 GCATGTAAGAGAAATA-TACCTGCATGTTAGTCTAA-CGTTCTGATAG-A M_murinus300490 GCATGTGAGATAAATA-CACCTGCATGTTAGTCTAA-AGTTCTGATAG-A M_domestica300167 GCATGTGAGATGAATA-TACCTGCATATTAGTCATG-CGTTCTGATAG-A M_musculus300847 GCATGTGAGACTAATA-TACCTGCATGCTAGTCTTCAGGTTCTGATGG-A M_lucifugus300635 GCATGTGAGATAAATA-TACCTGCATGTTAGTCTTA-GGTTCTGATAC-A M_lucifugus300789 GCATGTGAGATAAATAATACCTGCATGTTAGTCTTA-GGTTCTGATAC-A O_anatinus304466 GCATGTAAGAGAAATA-TACCTGCATGTTAGTCATA-CGTTCTGATTGCA O_garnettii300706 GCATGTGAGATAAACA-TACCTGCATGTTAGTCTAG-GGTTCTGATAG-A P_troglodytes300651 GCATGTAAGAGAAATA-TACCTGCATGTTAGTCTAA-CGTTCTGATAG-A P_pygmaeus300650 GCATGTAAGAGAAATA-TACCTGCATGTTAGTCTAA-CGTTCTGATAG-A R_norvegicus300884 GCATGTGAGACTAATA-CACCTGCATGTTAGTCCTCAGGTTCTGACGG-C S_araneus300159 GCATGTGAGATCAATA-TACCTGCATGTTAGTCTTA-AATCCTGATAG-A S_araneus300187 GCATGTGAGATCAATA-TATCTGCAAGTTAGTCTTA-GGTTCTGATAG-A S_araneus300447 GCATGTGAGATCAATA-TACCTGCATGTTAGTCTTA-AGTTCTGATAG-A S_araneus300593 GCATGTGAGGTCAATG-TATCTGCAAGTTAGTCTTA-GGTTCTGATAG-A S_araneus300782 ACATGTGAGATCAATA-TACCTGCATGTTAGTCTTA-AGTTCTGATAG-A S_araneus300934 GTACGTGAGATGAA-G-CAGCTGCATGCTGGCCCTG-GGCCCGAGAAG-A S_araneus301014 GCATGTGAGATCAACA-TACACGCATGTTCGATCTA-TGTCCTAACTG-A S_tridecemlineatus300269 TCAGACAAGA---------------------------------------- O_garnettii300105 TCAGACAAGA---------------------------------------- O_garnettii300127 TCAGATAAGA---------------------------------------- O_garnettii300142 TCAGACAAGG---------------------------------------- O_garnettii300148 TT-GACAAGAA--------------------------------------- C_familiaris300438 AATGACACGCAATTGTGCTGCCATTTTTT---GCTGTCAGGACTCGACTG D_rerio300294 ACCTTCACAGGAGTCCACCAGGG----CAGAGCTGCTGGGTAGCGGACAC D_rerio300295 ACCTTCACAGGACTACAGCAGGG----CAGAGCTGCTGGGGAGCGGACAC E_telfairi300566 ACTGGTATAAAATGAGAGAAAAA----ATGCAATTATCACAAT------- E_telfairi300744 AAATNNNNNNN--------------------------------------- E_caballus300268 AATGACATGCAGTTGTGCTGTCATTTTTTT-TACTATCAGGACTCGACTG E_europaeus300446 GATGGCAGCAGCCG---GCTGC--CATTCG-CTCCGCCAGGACTCGACTG F_catus300227 AATGACATGCAATTGTGCTGCCATTTTTTTTTGCTATCAGGACTTGACTG G_gallus300026 AGTGACTGTAAATATGAGAGTCA---TTTACCGCTATCAGGACATGGCTG G_gorilla300023 AATGACATGCATTTATGCTGCC--ATTTGT-TACTATCAGGACTTGACTC H_sapiens300692 AATGACATGCATTTATGCTGCC--ATTTGT-TACTATCAGGACTCGACTC M_mulatta300626 AATGACATGCATTTTTGCTGCC--ATTTGT-TACTATCAGGACTCGACTC M_murinus300490 AATGACATGCAGTTATGCTGCC--ATTTTA-TACTATCAGGACTCGACTG M_domestica300167 AATGGCAGT--------GTGTC--GTTTCT-TACTATCAGGACTTGATTG M_musculus300847 AGTGACATGCGTGATG-CTGTC--ATGTGT-TACTGTCAGGACTCGACTG M_lucifugus300635 AATGGCATGCCATTGTGCTGCCATTTTTG--TACTATCAGGACTTGACTG M_lucifugus300789 AATGGCATGCCATTGTGCTGCCATTTTTG--TACTATCAGGACTTGACTG O_anatinus304466 AGTGACAGCAGCATTGCGTGTC--ATTTCT-CACGATCAGAGCCTGACTG O_garnettii300706 AATGGCATGCAGTTATGCTGCC--ATTTTT-TACTATCAGGACTTGACTG P_troglodytes300651 AATGACATGCATTTATGCTGCC--ATTTGT-TACTATCAGGACTCGACTC P_pygmaeus300650 AATGACATGCATTTATGCTGCCC-ATTTGT-TACTATCAGGACTCGACTC R_norvegicus300884 AGTGACACGCGTTATG-CTGTC--ATGTGT-TACTGTCAGGACTCGACTG S_araneus300159 AATGACATGCAATTATGCTGCCA---TTCTTGACTATCAGGACCTGACTG S_araneus300187 AATGACATGCAATTATGCTGCCG---TTCTTGACTATGAGGACGTGACTG S_araneus300447 AATGACATGCAATTATGCTGCCA---TACTTGACTATCAGGACGTGACTG S_araneus300593 AATGACATGCAATTATGCTGCCA---TTCTTGACTATCAGGACATGACTG S_araneus300782 AATGACATGCAATTATGCTGCCA---AACTTGACTATCAGGACGTGACTG S_araneus300934 -ATGACCTGCAATTATGCTGCAA---TTCTTTAGCACAAAGTTTTGACTG S_araneus301014 GATGACATAAAATCATGTGTTCA---TTCCTGA-TGAACCGGACTGTCCA S_tridecemlineatus300269 -------------------------------------------------- O_garnettii300105 -------------------------------------------------- O_garnettii300127 -------------------------------------------------- O_garnettii300142 -------------------------------------------------- O_garnettii300148 -------------------------------------------------- C_familiaris300438 GTGTGCGG-ACACT- D_rerio300294 A-------------- D_rerio300295 A-------------- E_telfairi300566 --------------- E_telfairi300744 --------------- E_caballus300268 GTGTGCGG-ACACT- E_europaeus300446 GTGTGCGG-ACACG- F_catus300227 GTGTGCGG-ACACT- G_gallus300026 GTATGCAG-ACATT- G_gorilla300023 GTGTGCGG-ACATT- H_sapiens300692 GTGTGCGG-ACATTT M_mulatta300626 GTGTGCGG-ACACT- M_murinus300490 GTGTGCGG-ACACT- M_domestica300167 GTATGCGG-ACAGA- M_musculus300847 GTGTGCGG-ACACG- M_lucifugus300635 GTGTGCGG-ACACT- M_lucifugus300789 GTGTGCGG-ACACT- O_anatinus304466 GTGTGCGG-ACACT- O_garnettii300706 GTGTGCGG-ACACT- P_troglodytes300651 GTGTGCGG-ACATT- P_pygmaeus300650 GTGTGCGGGACAT-- R_norvegicus300884 GTGTGCGG-ACACT- S_araneus300159 TTGTGTGG-ACACT- S_araneus300187 GTGTGCAG-ACACT- S_araneus300447 GTGTGCGG-ACACT- S_araneus300593 GTGTGCAG-ACACT- S_araneus300782 GTGTGCAG-ACACT- S_araneus300934 GTGTGCAG-ACATT- S_araneus301014 GGGTGCAG-ACTTT- S_tridecemlineatus300269 --------------- O_garnettii300105 --------------- O_garnettii300127 --------------- O_garnettii300142 --------------- O_garnettii300148 ---------------