Family: SnoR38

CLUSTAL W (1.83) multiple sequence alignment C_familiaris300342 --TGCTCTGATGAA-ATCACTTA-------TAGGAAGTGCCGTCAGAAGCGATAACTGAC C_porcellus300566 --TGCTCTGATGATTACTAGTAA-------TAGGAAATGCCATCAGAAGTAATAACTGAC C_porcellus300741 --TGCTCTGATGAT-ATCACTGA-------CA-------------------ATAACTGAC C_porcellus300951 --TGTTGTGATGATAACGAGTAA-------TAGGAAGTGCCGTCAGAAGCGATAACTGAC C_porcellus300952 --TGCTCTGATGAT-ACCACTTAA------TAGGAAGTGCCGTCAGAATCGATAACTGAC D_rerio300029 --TTCTGTGATGAAAACGCTATAT-------AGGAAGTGCCGTCTGATGCGATAACTGAC D_rerio300030 --TTCTGTGATGAAAACGCTATAT-------AGGAAGTGCCGTCTGATGCGATAACTGAC D_novemcinctus300184 --TGCTCTGATGAA-AAC-CATAA------TAGGAAGTGCCGTCAGAAGCGATAACTGAC D_novemcinctus300409 --TGCTCTGATGAA-AAC-CATAA------TAGGAAGTGCCGTCAGAAGCGATAACTGAC D_novemcinctus300549 --TGTTGTGATGAT-ACTGGTAA-------TAGGAAGTGCCGTCAGAAGCGATAACTGAC D_melanogaster300098 -TGCACATGATGATAATTTGTC-TTCTTGATAGGAAGTGCCAACTGACAC-ATAAATGAA D_melanogaster300099 CTGCACATGATGATAATTGAAAGTTCTTGATAGGAATTGCCGGCTGACAC-ATATATGAA E_telfairi300714 --TGGCCTGATGAT-ATTGGTAA-------TAGGAAGTGCCGTCAGACGCGATAACTGAC E_caballus300107 --TGCTCTGATGAA-ATCACTAA-------TAGGAAGTGCCGTCAGAAGCGATAACTGAC E_caballus300108 --TGTCCTGATGAT-ACTGCTAT-------TAGGAAGTGCCGTCAGATGCGATAGCTGAC E_europaeus300220 ------------AGATTGAAAGAATACTTATAGGAAGTGCTTTCAGATGGGATAACTGAT E_europaeus300307 --TGCTCTGATGAA-ATCACTCA-------TAGGAAGTGCCATCAGATGCGACAAATGTA E_europaeus300526 --TGCTCTGATGAA-ATCACTCA-------TAGGAAGTGCCGTCAGATGCAAAAAAAAAA E_europaeus300615 --CGTCGTGATGAC-ACCGGGAACTAATGTTAGGAAGTGCCGTCAGAGTCGACAAGTGAC E_europaeus300616 --TGCTCTGATGAA-ATCACTCA-------TAGGAAGTGCCGTCAGATGCGACAGCTGAC F_catus300291 --TGCTCTGATGAA-ATCACTTA-------TAGGAAGTGCCGTCAGAAGCGATAACTGAC G_gallus300024 ------------------------------------------------------------ G_aculeatus300010 ----CGATGACGAAAACCTGCAAT-------AGGAAGTGCCGTCTGATGCGACAACTGAC G_aculeatus300093 --TTCGGTGATGATAACC-----T-------AGGAAGTGCCGTCCGATGCGATAACTGAC G_gorilla300788 --TGTCCTGATGAT-ACTTGTAA-------TAGGAAGTGCCGTCAGAAGCGATAACTGAC G_gorilla300787 --TGCTCTGATGAA-ATCACTAA-------TAGGAAGTGCCGTCAGAAGCGATAACTGAC H_sapiens300703 --TGTCCTGATGAT-ACTTGTAA-------TAGGAAGTGCCGTCAGAAGCGATAACTGAC H_sapiens300704 --TGCTCTGATGAA-ATCACTAA-------TAGGAAGTGCCGTCAGAAGCGATAACTGAC L_africana300512 --TGTCCTGATGAG-ATTGGTAA-------TAGGAAGTGCCGTCAGAAGCGATAACTGAC M_mulatta300511 --TGCTCTGATGAA-ATCACTAA-------TAGGAAGTGCCGTCAGAAGCGATAACTGAC M_mulatta300512 --TGCCCTGATGAT-ACTTGTAA-------TAGGAAGTGCCGTCAGAAGCGATAACTGAC M_murinus300550 --TGTCCTGATGAT-ACTGGAAA-------TAGGAAGTGCCGTCAGAGACGATAACTGAC M_domestica300004 --TGGCGTGATGAGAACCCAGAAT-------AGGAAGTGCCGTCAGAC-CGACAACTGAC M_domestica300006 --GTTCATGATGAT-ACCACTCAA------TAGGAAGTGCCGTCAGATGCGATAACTGAC M_musculus300078 ----TGATGATGAA-ACTAGAAAAAAA----AGGAAGTGCCGTCCGATGCGACAACTGAC M_musculus300079 --TGCTGTGATGAG-ATGACTAAG------TAGGAAGTGCCGTCAGAGTCGATAACTGAC M_lucifugus300506 --TGCTCTGATGAA-ATCACCCA-------TAGGAAGTGCCGTCAGAAGCGATAACTGAC M_lucifugus300962 --TGCTCTGATGAA-ATCACCCA-------TAGGAAGTGCCGTCAGAAGCAATAACTGAT M_lucifugus300963 --TGTCCTGATGAT-ACTGATCC-------TAGGAAGTGCCGTCAGATGCGATAACTGAC M_lucifugus300386 --TGCTCTGATGAA-ATCACCAA-------TAGGAAGTGCCGTCAGAAGCGGTAACTGAC M_lucifugus300505 --TGTCCTGATGAT-ACCGATCC-------TAGGAAGTGCCGTCAGATGCGCTAGCTGAC O_anatinus304460 --TGCAATGATGATAACATGGAATA-----TAGGAAGTGCCGTCAGATGCGATAACTGAC O_anatinus304457 --CCAAATGAAGAAAACCGGGGAT-------TGGAAGTGCCGTCAAATGCTATAACTGAC O_anatinus304458 --CCAGATGATGAGAACCGTGGAT-------AGGAAGTGCCGTCAGATGCGAGAACTGAC O_cuniculus300147 --TGACCTGATTAT-ATTAGTAA-------TAGGAAGTGCAATAAGAAGCAATAACTGAT O_cuniculus300180 --TGGCCTGATGAC-ACCAGTAA-------TAGGCTGTGCCCTCAGAAGCGTTAACTGAC O_cuniculus300487 --TGACCTGATGAT-ACCAGTAA-------TAGGAAGTGCCGTCAGAGGCGATAACTGAC O_cuniculus300488 --TGCTGTGATGAG-ATCACTCT-------TAGGAAGTGCCGTCAGAAGCGACAACTGAC O_latipes300028 --GTCTGTGATGAAAATTGTGAAT-------AGGAAGTGCCGTCTGATGCGATAACTGAC O_latipes300030 --TTCAATGATGAAAACCTGGAAT-------AGGAAGTGCCGTCAGATGCGATAACTGAC O_garnettii300677 --TGTCCTGATGAT-ACTAGTAA-------TAGGAAGTGTCATTAGAGGCGGTAACAGAC O_garnettii300678 --TGCTCTGATGAA-ATCGCTAA-------TAGGAAGTGCCGTCAGAAGCGATAACTGAC P_troglodytes300550 --TGTCCTGATGAT-ACTTGTAA-------TAGGAAGTGCCGTCAGAAGCGATAACTGAC C_familiaris300342 GATAACCTTTCCT--GGCTGACT--- C_porcellus300566 AAT-ATTTATACTTGATCTGACT--- C_porcellus300741 AATAACTACTACT--GGCTGACT--- C_porcellus300951 GAT-ATATATTCTTGATCTGATT--- C_porcellus300952 GATAACTATTCCT--GGCTGACC--- D_rerio300029 GATGGCAAAGCAAAATCTTTCTGAGA D_rerio300030 GATGGCAAAGCAAAATCTTTCTGAGA D_novemcinctus300184 GATAACTATTCTT--GGCTGACT--- D_novemcinctus300409 GATAACTATTCTT--GGCTGACT--- D_novemcinctus300549 GATGTTTTATGCCC-GTCTGACC--- D_melanogaster300098 GCTAGTTTAACCCT---CTGAAAGCA D_melanogaster300099 GCTAATTCTAGTTT-ATCTGATTACA E_telfairi300714 GAT-GTCTGTACCT-GCCTGACC--- E_caballus300107 GATAACAATTCCT--GGCTGACT--- E_caballus300108 GAC-TTTCATGCCT-GTCTGACC--- E_europaeus300220 GATAAT--AACTCC-TATTAAAAA-- E_europaeus300307 TGCACATGT----ATGCAC------- E_europaeus300526 AAAGTATGTTGTGATGTTCACT---- E_europaeus300615 GAGACTTCAGGCC--CGCTGACC--- E_europaeus300616 GAGAA-T--TCCT--GGCTGATG--- F_catus300291 GATAACAGTTCCT--GGCTGACT--- G_gallus300024 -------------------------- G_aculeatus300010 GATCCACTATTCTGAGT--------- G_aculeatus300093 GATGGAATGAACTGTTACCTGAGG-- G_gorilla300788 GACGTCTAATGTCT-ATCTGACC--- G_gorilla300787 GAAGACTACTCCT--GTCTGATT--- H_sapiens300703 GACGTCTAATGTCT-ATCTGACC--- H_sapiens300704 GAAGACTACTCCT--GTCTGATT--- L_africana300512 GAT-ATCTGCGTTT-GTCTGACT--- M_mulatta300511 GAAAACTACTCCT--GTCTGATT--- M_mulatta300512 GACGTTTAACGTCT-ATCTGACC--- M_murinus300550 GACGTTT-ATGCTT-GTCTGACC--- M_domestica300004 GATAGCCTGAGCTGGTGTCTGACC-- M_domestica300006 GATGAACTTGATCATGTCTGACA--- M_musculus300078 GACATCCCTAGTT--AGCTGACT--- M_musculus300079 GATAACTGCTCCT--GGCTGACT--- M_lucifugus300506 GATAA---TTCCT--GGCTGACT--- M_lucifugus300962 GATAA---TTCCT--GGCTGACT--- M_lucifugus300963 GA--TTTCACACG--ATCTGACC--- M_lucifugus300386 GATAA---TTCCT--GGCTGACT--- M_lucifugus300505 GA--TTTCACACG--ATCTGACC--- O_anatinus304460 GATAATCTCTGTACCTAATCTGACC- O_anatinus304457 GATNNNNNNNNNNGGGACTGTGT--- O_anatinus304458 GATGGATTTTCACGGGGTCTGACT-- O_cuniculus300147 GAT-GTTTATGCCC-ATCTGACT--- O_cuniculus300180 CAT-GTTCATGTGT-GTGTGGGG--- O_cuniculus300487 GAT-GCCCGTAGCC-GTCTGAGC--- O_cuniculus300488 GAGAA-TGCTCCT--GGCTGATT--- O_latipes300028 GATGTTTCTTGATCACAGTTC----- O_latipes300030 GAAAATTTCTAATCCGCTTTTC---- O_garnettii300677 GAC-GTTTATGCCT-GTCTGACT--- O_garnettii300678 GATAACTATTACT--GTCTGACT--- P_troglodytes300550 GACGTCTAATGTCT-ATCTGACC--- -------- C_familiaris300409 ------------- C_porcellus300852 ------------- D_novemcinctus300555 ------------- E_telfairi300843 ------------- E_caballus300368 ------------- E_europaeus300630 ------------- E_europaeus300631 ------------- G_gorilla300689 ------------- H_sapiens300609 ------------- L_africana300500 ------------- M_mulatta300599 ------------- M_murinus300533 ------------- M_domestica300189 ------------- M_musculus300818 ------------- M_lucifugus300682 ------------- M_lucifugus300712 ------------- O_anatinus302870 ------------- O_cuniculus300417 ------------- P_troglodytes300627 ------------- P_pygmaeus300720 ------------- R_norvegicus300993 ------------- S_araneus301080 ------------- T_belangeri300381 TTCTGAGCAATAA T_aestivum300126 ------------- T_aestivum300195 ------------- T_aestivum300200 ------------- T_aestivum300222 ------------- T_aestivum300369 ------------- T_aestivum300367 ------------- T_aestivum300261 ------------- T_CTGAGACAACATTGAG ------------- M_musculus300677 ------------- M_musculus300782 ------------- M_lucifugus300351 ------------- M_lucifugus300943 ------------- O_anatinus302425 ------------- O_anatinus302426 ------------- O_cuniculus300166 ------------- O_cuniculus300508 ------------- O_garnettii300288 ------------- O_garnettii300450 ------------- P_troglodytes300638 ------------- P_troglodytes300639 -------------