Family: SnoR28

CLUSTAL W (1.83) multiple sequence alignment A_tauschii300109 GTATGTGGATGATGAGAT-CACAAGTAAAAA-------TACAGTTATCCCTGTCTTACTT A_tauschii300114 GGATGTGGATGATGAGAT-CACAAGTAAAAA-------TACAGTTATCCCTGTCTTACTT A_tauschii300126 GTATGTGGATGATGAGAT-CACAAGTAAAA--------TACAGTTATCCCTGTCTTACTT A_tauschii300143 GTATGTGGATGATGAGAT-CACAAGTAAAAA-------TACAGTTATCCCTGTCTTACTT A_tauschii300424 GGATGTGGATGATGAGAT-CACAAGTAAAAA-------TACAGTTATCCCTGTCTTACTT A_tauschii300439 GGGCGTGGGTGATGAGAT-CACAAGTAAAAA-------TACAGTTATCCCTGTCTTACTT A_tauschii300470 CTATGTGGATGATGAAAT-CACAAGTAAAAAA------TGCAGTTATCCCTGTCTTGCTT A_thaliana300070 ----TTGGATGATGAGAAACAAAAATCAAAA-------TACAGTTATCCCTGGCTTAGGG C_porcellus301034 ----------------TTGAGCTGAGGATGATT-----TAAAGTTATCCCTGTCTGAAAT C_porcellus301035 ----------------CTGAGTCTGTGATGAT------TAAAGTTATCCCTGTCTGAAGG C_porcellus301036 ----------------CCCAATCTATGATGGTT--------AATTATCCCTATCTGAAAA D_novemcinctus300207 ----------------TTGAGCCAAGGATGATT-----TAAAGTTATCCCTGTCTGAAAC D_novemcinctus300619 ----------------CTGAGTCAATGATGATG-----CAAAGTTATCCCTGTCTGAAGG O_anatinus303106 ----------------GCGAGCTAGTGATGAGT-----AAAAGTTATCCCTGTCTGAACA S_pombe300072 ----TTGTATGATGATAC-TATTTTTTTT---------TACAGTTATCCCTGTCTAA--- T_aestivum301246 GGATGTGGATGATGAGAT-CACAAGTAAAAA-------TACAGTTATCCCTGTCTTACTT T_aestivum301355 GGGCGTGGATGATGAGAT-CACAAGTAAAAAA------TACAGTTATCCCTGTCTTACTT T_aestivum301403 GGATGTGGATGATGAGAT-CACAAGTAAAAA-------TACAGTTATCCCTGTCTTACTT T_dicoccoides301097 GGGCGTGGATGATGAGAT-CACAAGTAAAAAATTAAAATACAGTTATCCCTGTCTTACTT T_dicoccoides301098 GGGCGTGGATGATGAGAT-CACAAGTAAAAAATTAAAATACAGTTATCCCTGTCTTACTT * ******** ** A_tauschii300109 CCTTTGAAG-GGTGCT-----GAGAATACTTCGAATCTGACACAGAT A_tauschii300114 CCTCGGAAG-GGTGCT-----GAGAATACTTTCAATCTGACACGAGT A_tauschii300126 TCTCGGAAG-GGTGCT-----GAGAATACTTTCAATCTGACACGATT A_tauschii300143 CCTCGGAAG-GGTGCT-----GAGAATACTTTCAATCTGACACGGTT A_tauschii300424 CCTTGGAAG-GGTGCT-----GAGAGAACTTTGAATCTGACACAATT A_tauschii300439 CCTTGGAAG-GGTGCT-----GAGAATACTTCGAATCTGACACGATT A_tauschii300470 CCTCGGAAG-GGTGCT-----GAGAATACTTTGAATCTGACACAGAT A_thaliana300070 TTTAAAGCCCGTTGCT-----GAGTCT-TTTGTAATCTGACA----- C_porcellus301034 -----GCCATCTTGTG-----GAGTCCTGATT---ACTGAAGCTCAA C_porcellus301035 CA----AAGGCCTTTCTGTGTGGATTGTGGATC--TCTGAAACTCAG C_porcellus301036 ----------TCTCAGCTGAAGGGAAATAATTCATTCTGAGGTTTAG D_novemcinctus300207 -----GACATCTTTTGTGAG-GAGATGTGACTC--GCTGAGGCTCAG D_novemcinctus300619 CAGAGAAAGGCCTTTCTGTGTGGAACTTGGATG--TCTGAAACTCAG O_anatinus303106 ------AAATCCTTTGTG---GAATTTTGATTT--CCTGAGGCTCAG S_pombe300072 -----AGCATAGTGTT-----GAGAATGGT--AAATCTGAATA---- T_aestivum301246 CCTCGGAAG-GGTGCT-----GAGAATACTTTGAATCTGACACAATT T_aestivum301355 CCTCGGAAG-GGTGCT-----GAGAATACTTCGAATCTGACACGATT T_aestivum301403 CCTCGGAAG-GGTGCT-----GAGAAAACTTTGAATCTGACACAATT T_dicoccoides301097 CCTCGGAAG-GCTGCT-----GAGAATACTTCGAATCTGACACGATT T_dicoccoides301098 CCTCGGAAG-GCTGCT-----GAGAATACTTCGAATCTGACACGATT * * **** --GCAGTTCTCCGTGCCACTCAGACTTG-CTCTGCT--GTGA---TGGCCTCGAACAA A_tauschii300295 ----GCAGTTCTCCGTGCCGCTCAGACTTG-CTCTGCT--GTGA---AGGCCTCGAACAA A_tauschii300294 ----GCAGTTCTCCGTGCCGCTCAGATTTT-CTATGCT--ATGA---CGGCCTCGAACAA A_tauschii300292 ----GCAGTTCTCCGTGCCGCTTAGATTTT-CTGTGCT--CTGA---TGGCCTCGAACAA A_tauschii300298 ----GCAGTTCTCCGTGCCACTCAGACTTG-CTCTGCT--GTGA---TGGCCTCGAACAA A_thaliana300207 TT-TGCGATTCTCCGTGCCTATCAAATTTTGTTTTTCGTATTGATAATGGCCTCGAACAA A_thaliana300124 ---AGCGATTCTCCGTGCCTATCAAGTTTTCTAATCTTGATTGT---TGGCCTCGAACAA O_sativa300070 AAACGCAGTTCTCCGTGCCGCTCAGATTTT-CTCTGTTTTGTGA---CGGCCTCGAACAA O_sativa300071 AAACGCAGTTCTCCGTGCCGCTCAGATTTT-CTCTGTTTTGTGA---CGGCCTCGAACAA O_sativa300072 ----GCAGTTCTCCGTGCCGCTCAGATTTTCCTCTCTTTTGTGA---CGGCCTCGAACAA O_sativa300073 ----GCAGTTCTCCATGCCGCTCAGATTTTCCTATGTTTTGTGA---CGGCCTCGAACAA T_aestivum300060 ----GCAGTTCTCCGTGCCGCTTAGATTTT-CTGTGCT--CTGA---TGGCCTCGAACAA T_aestivum300061 ----GCAGTTCTCCGTGCCGCTCAGACATG-CTCTGCT--GTGA---CGGCCTCGAACAA T_aestivum300062 ----GCAGTTCTCCGTGCCACTCAGACTTG-CTCTGCT--GTGA---TGGCCTCGAACAA T_aestivum300063 ----GCAGTTCTCCGTGCCGCTCAGACTTG-CTCTGCT--GTGA---AGGCCTCGAACAA T_aestivum300065 ----GCAGTTCTCCGTGCCACTCAGACTTG-CTCTGCT--GTGA---TGGCCTCGAACAA T_aestivum300066 ----GCAGTTCTCCGTGCTGCTCAGATTTT-CTATGCT--ATGA---CGGCCTCGAACAA T_aestivum300336 ----GCAGTTCTCCGTGCCGCTTAGATTTT-CTGTGCT--CTGA---TGGCCTCGAACAA T_aestivum300337 ----GCAGTTCTCCGTGCCACTCAGACTTG-CTCTGCT--GTGA---TGGCCTCGAACAA T_aestivum300338 ----GCAGTTCTCCGTGCCACTCAGACTTG-CTCTGCT--GTGA---TGGCCTCGAACAA T_aestivum300339 ----GCAGTTCTCCGTGCCGCTCAGATTTT-CTATGCT--ATGA---CGGCCTCGAACAA T_aestivum300343 ----GCAGTTCTCCGTGCTGCTCAAATTTT-CTATGCT--GTGA---CGGCCTCGAACAA T_aestivum300342 ----GCAGTTCTCCGTGCCGCTCAGACTTG-CTCTGCT--GTGA---CGGCCTCGAACAA T_aestivum300340 ----GCAGTTCTCCGTGCCGCTCAGACTT--CTCTGCT--GTGA---CGGCCTCGAACAA T_dicoccoides300005 ----GCAGTTCTCCGTGCCGCTCAGACTTG-CTCTGCT--GTGA---CGGCCTCGAACAA T_dicoccoides300175 ----GCAGTTCTCCGTGCCACTCAGACTTG-CTCTGCT--GTGA---TGGCCTCGAACAA T_dicoccoides300176 ----GTAGTTCTCCGTGCCGCTTAGATTTT-CTGTGCT--CTGA---TGGCCTCGAACAA T_dicoccoides300177 ----GCAGTTCTCCGTGCCGCTCAGATTTT-CTATGCT--ATGA---CGGCCTCGAACAA T_dicoccoides300178 ----GCAGTTCTCCGTGCCGCTCAGACTTG-CTCTGCT--GTGA---CGGCCTCGAACAA T_dicoccoides300179 ----GCAGTTCTCCGTGCTGCTCAAATTTT-CTATGCT--GTGA---CGGCCTCGAACAA T_dicoccoides300003 ----GCAGTTCTCCGTGCCGCTCAGACTTG-CTCTGCT--GTGA---TGGCCTCGAACAA T_dicoccoides300002 ----GCAGTTCTCCGTGCCGCTCAGATTTT-CTATGCT--ATGA---CGGCCTCGAACAA T_dicoccoides300000 ----GCAGTTCTCCGTGCCGCTTAGATTTT-CTGTGCT--ATGA---CGGCCTCGAACAA T_dicoccoides300004 ----GCGGTTCTCCGTGCCGCTCAAATTTT-CTATGCT--GTGA---CGGCCTCGAACAA * ****** *** * * * * ** ************ A_tauschii300299 TCTGCTACATC A_tauschii300297 TCTGCTACATC A_tauschii300296 TCTGCTACATA A_tauschii300295 TCTGCTACATC A_tauschii300294 TCTGCTACATG A_tauschii300292 TCTGCTACATC A_tauschii300298 TCTGCTACATA A_thaliana300207 GTCGCTACATT A_thaliana300124 GTCGCTACATT O_sativa300070 GCTGCTACATC O_sativa300071 GCTGCTACATC O_sativa300072 GCTGCTACATC O_sativa300073 GCTGCTACATC T_aestivum300060 TCTGCTACATC T_aestivum300061 TCTGCTACATC T_aestivum300062 TCTGCTACATA T_aestivum300063 TCTGCTACATC T_aestivum300065 TCTGCTACATA T_aestivum300066 TCTGCTACATG T_aestivum300336 TCTGCTACATC T_aestivum300337 TCTGCTACATA T_aestivum300338 TCTGCTACATA T_aestivum300339 TCTGCTACATT T_aestivum300343 TCTGCTACATC T_aestivum300342 TCTGCTACATC T_aestivum300340 TCTGCTACATC T_dicoccoides300005 TCTGCTACATA T_dicoccoides300175 TCTGCTACATA T_dicoccoides300176 TCTGCTACATC T_dicoccoides300177 TCTGCTACATG T_dicoccoides300178 TCTGCTACATC T_dicoccoides300179 TCTGCTACATC T_dicoccoides300003 TCTGCTACATA T_dicoccoides300002 TCTGCTACATG T_dicoccoides300000 TCTGCTACACC T_dicoccoides300004 TCTGCTACATC ******