Family: SNORND104

CLUSTAL W (1.83) multiple sequence alignment E_caballus300233 ----GCGGTGATGACATCC-CAATCAAAGCACGTGTTAGACTGCTGACGC O_anatinus304393 ----GCTGTGATGACTTCC-C--TTGAA--ACGTGTTAGACTGCTGATGC A_tauschii300100 --GGACAATGGTGAAAATAACAAACAAA--ACAAACCATCTTTTGGGACT A_tauschii300181 --GGACAGTGATGAAAATCACGAACAAA--ACACACCATCTTTCGGGACT A_tauschii300101 TTGTCCA-TGATGAAAAAC-CTGTTAA---TTATACCATCTTTCGGGACT A_tauschii300121 -TGTCCGGTGATGAAAAAC-CTGTTGAA--TCATACCATCTTTCGGGACT A_tauschii300167 -TGTCCGGTGATGAAAAAC-CT-TTAA---TCATACCATCTTTCGGGACT A_tauschii300168 --GGACAATGATGAAAACCATGAACAAA--ACACACCATCTTTCGGGACT A_tauschii300180 -TGTCCGGTATTGAAAAAC-CTATTCA---TCATACCATCTTTCGGGACT A_tauschii300594 -TGTCCGGTGATGAAAAAG-CTGTTAA---TCATACCATCTTTCGGGACT A_tauschii300593 -TGTCCGGTGATGAAAAAC-CTGTTAA---TCATACCATCTTTCGGGACT A_tauschii300592 -TGGAAAGTGATCAAAAGAAAGAACAAA--ACACACCATCTTTCGGGATT A_tauschii300589 -TGTCCGGTGATGAAAAAC-CTGTTAA---TCATACCATCTTTCGGGACT A_tauschii300588 -TGGAAAGTGATCAAAAGAAAGAACAAA--ACACACCATCTTTCGGGATT A_tauschii300568 -TGTCCGGTGATGAAAAAC-CTGTTAA---TCATACCATCTTTCGGGACT A_tauschii300565 -TGTCCGGTGATGAAAAAC-CTGTTAA---TCATACCATCTTTCGGGACT A_tauschii300542 -TGGCCAGTGATGAAAAAC-CTATTAA---TCATACCATCTTTTGGGACT A_tauschii300509 -TGGTCAGTGATGAAAAAC-CTATTAA---TCATACCATCTTTTGGGACT A_tauschii300476 -GTTCCGGTGATGAAAAAC-CTGTTAAA--TCATACCATCTTTCGGGACT A_tauschii300432 --GGACAGTGATGAAATCCACAAACAAA--ACACACCATCTTTCGGGACT A_tauschii300300 -TGTCTGGTGATGAAAAAC-CTATTAA---TCATACCATCTTTAGCGACT A_tauschii300046 -TGGCCGGTGATGAAAAAA-CTTTTAA---TCATACCATCTTTCGGGACT A_tauschii300057 --GGACAGCGATGAAAATCACGAACAAA--ACACACCATCTTTGGGGACT A_tauschii300099 -TGTCCTGTGACGAAAAAC-CTGTTAA---TCATACCATCTTTCGGGACT C_familiaris300331 ----------------CATCCCAGTGATG-ACA-GATGACATTGTCAGCC C_porcellus300898 ----------------GATCCTGGTGATG-ACA-GATGACATTGTCAGCC D_melanogaster300082 -CTTGCTCTGATGACAAAAACACGAAAAGAACA-ATCATGTTGAGACACT E_telfairi300705 ----------------GATCCTAGTGATG-ACA-GACGACATTGTCACCT E_caballus300235 ----------------GATCCTGGTGATG-ATA-GACCACATTGTCAGCC E_europaeus300172 ----------------GATCCTGATGATG-ATAATAAGACATTGTTAACC E_europaeus300563 ----------------AATCCTGATGATG-ATAATAAGACATTGTTAACC G_gorilla300768 ----------------GGTCCTGGTGATG-ACA-GATGGCATTGTCAACC H_sapiens300555 -------------------CCTGGTGATG-ACA-GATGGCATTGTCAGCC H_sapiens300641 ----------------GATCCTGGTGATG-ACA-GACGACATTGTCAGCC L_africana300498 -----------------ATCCTGGTGATG-ACA-GATGACATTGTCAGCT M_mulatta300695 -----------------ATCCTGGTGATG-ACA-GATGACATTGTCAGTC M_mulatta300728 -----------------GTCCTGGTGATG-ACA-GATGACATTGTCAGCC M_murinus300443 -----------------GTCCTGGTGATG-ATG-GACGACATTGTCAGCC M_musculus300931 ----------------GATCCTAGTGATG-ACAAGACGACATTGTCAACC O_cuniculus300439 ----------------GATCCTGGTGATG-ACA-GATGACATTGTCAGCC O_garnettii300742 -----------------GTCCTGGTGATG-ACA-GATGACATTGTCAGCC P_troglodytes300715 -----------------GTCCTGGTGATG-ACA-GATGGCATTGTCAACC P_troglodytes300503 ----------------GATCCTGGTGATG-ACA-GACGACGTTGTCAGCC P_pygmaeus300756 -----------------GTCCTGGTGATG-ACA-GATGACATTGTCAGCC P_pygmaeus300615 ----------------GATCCTGGTGATG-ACA-GACGACGTTGTCAGCC S_araneus300940 ----------------GATCCTGGTGATG-ATC-AGTGACATGATCAGCC S_tridecemlineatus300297 ----------------GATCCTGGTGATG-ACA-GATGACATTGTCACCC S_tridecemlineatus300162 ----TCAATTATTTGAGGA--AAACAAAA---ATAACATCTTTGGGGACT T_aestivum301239 -TGTCTGGTGATGAAAAAC-CTGTTAA---TCATACCATCTTTCGGGACT T_aestivum301240 -TGTCTGGTGATGAAAAAC-CTATTAA---TCATACCATCTTTAGCGACT T_aestivum301251 -TGTCCGATGATGAAAAAC-CTGTTAA---TCATACCATCTTTCGGGACT T_aestivum301252 -TGTCCGGTGATGAAAAAC-CTGTTAA---TCATACCATCTTTCAGGACT T_aestivum301254 -TGGCCAGTGATGAAAAAC-CTATTAA---TCATACCATCTTTCGGGACT T_aestivum301255 -TGGCTGGTGATGAAAAAC-CTTTTAA---TCATACCATCTTTCGGGACT T_aestivum301287 -TGGCCGGTGATGAAAAAA-CTTTTAA---TCATACCATCTTTCGGGACT T_aestivum301341 --GGACAGTGATGAAATCCACGAACAAA--ACAC--CATCTTTCGGGACT T_aestivum301350 --GGACAGTGATGAAATCCACGAACAAA--ACAC--CATCTTTCGGGACT T_aestivum301505 -TGTCCGGTGATGAAAAAC-CTATTAA---TCATACCATCTTTCGGGACT T_aestivum301506 --GGACAATGATGAAAACCATGAACAAA--ACACACCATCTTTCGGGACT T_dicoccoides300990 -TGTCCGGTGATGAAAAAC-CTGTTAA---TCATACCATCTTTCGGGACT T_dicoccoides300991 --GGACAATGATGAAAACCATGAACAAA--ACACACCATCTTTCGGGACT T_dicoccoides301036 -TGTCCAGTGATGAAAAAC-ATGTTAA---TCATACCATCTTTCGGGACG T_dicoccoides301037 -TGTCCGGTGATGAAAAAC-CTGTTAA---TCATACCATCTTTTGGGACT T_dicoccoides301038 -TGTCCGGTGATGAAAAAC-CTGTTAA---TCATACCATCTTTCGGGACT T_dicoccoides301063 -TGGCCAGTGATGAAAAAA-CTTTTAG---TCATACCATCTTTCGGGACT T_dicoccoides301091 --GGACAGTGATGAAATCCATGAACAAA--ACACACCATCTTTCGGGACT T_dicoccoides301093 -TGTCCGGTGATGAAAAAC-ATGTTAA---TCATACCATCTTTCGGGACT T_dicoccoides301100 -TGTCCGGTGATGAAAAAC-CTGTTAAA--TCATACCATCTTTCGGGGCT T_dicoccoides301124 -TGGCTGGTGATGAAAAAC-CTGTTAA---TCATACCATCTTTCGGGACT T_dicoccoides301125 -TGGCCAGTGATGAAAAAC-CTATTAT---TCATACCATCTTTCGGGACT X_tropicalis300118 --------------GAGCG--AAGTGATG-GTATACCATCTTTCGGGACT * E_caballus300233 GGGTGATGCGAAC-TGGAATCTGAGC------------------------ O_anatinus304393 GAATGATGCCACT-TCCAATCTGAGCGATCGGTCGCTATGCGTCCATGCT A_tauschii300100 GATTGGTGCGCTT-TGTGTGCCATGCTGTAAAAATCGGCAATTCTGGTGT A_tauschii300181 GATTGGTGCGCTC-GGTGTGCCATGTTGTGAAAGTCTTCAATTCAGATGC A_tauschii300101 GATTTGT-TGCTA-TGCGT-CCATGCTGTC--ATTCCGTAATTCTGAA-A A_tauschii300121 GATTGGT-CGCTA-TGCGT-CCATGCTGTC--ATTCTGCAATTCTGAGGA A_tauschii300167 GATTGGT-CGCCG-TGCGC-CCATGCTGTC--ATTCTGCAATTCTGAGGA A_tauschii300168 GATAGGTGCACTC-TTTGTGCCATGCTGTGAAAATCTGCAATTCTGATGT A_tauschii300180 GATTGGT-TGATG-TGCTC-CCATGCT--C--ATTCTGCAATTCTGAGGC A_tauschii300594 GATTGGT-TGCTA-TG----------TGTC--ATTCTGCAATCCTGAGTA A_tauschii300593 GACTGGT-TGCTA-TG----------TGTC--ATTCTGCAATCGTGAGTA A_tauschii300592 GATTGGTGT-CTCCTATGTGCCATGATGTCTAA-TCTGTAATTCAGACAC A_tauschii300589 GACTGGT-TGCTA-TC----------TGTC--ATTCTACAATCCTGAGTA A_tauschii300588 GATTGTTGTGCTCGTATGTGCCATGATGTCTAA-TCTGCAATTCAGACGC A_tauschii300568 GATTGGT-CGCAG-TGCGC-CCATGCTGTC--ATTCTGCAATTCTGAGGA A_tauschii300565 GATAGGT-CGCAG-TGCGC-CCATGCTGTC--ATTCTGCAATTCTGAGGA A_tauschii300542 GATCGGT-TGCTA-TGTGT-CCATGCTGTC--TTTCTGCAATTCTGAAGC A_tauschii300509 GATCAGT-CGCTA-TGCGC-CCATGCTGTC--ATTCTGCAATTCTGAGGT A_tauschii300476 GATTGGT-CGCTA-TGCGT-CCATGCTGTC--ATTCTGCAATTCTGAGGA A_tauschii300432 GATTGGTGCACTC-TGTG--CCATGCTGTGAAAATGTGTGATTCTGATGT A_tauschii300300 GATTGGT-CGTTG-TGCGC-CCATGCTGTC--ATTCTGCAATTCAGAGGA A_tauschii300046 GATTGGT-CGCTA-TGTGT-CCATGCTGTC--ATTCTGCAATTCTGAGGC A_tauschii300057 GATTGGTGCTCTC-TGTGTGCCATCCTGTGAAAGTCTACAATTCTGATGT A_tauschii300099 GATTGGT-CGCTA-TGCGT-CCATGCTGTC--ATTCTGCAATTCTGAGGA C_familiaris300331 AATCCCT-ACGTG--GGA----GTGAGGACATGTCCTGCAATTCTGAAGG C_porcellus300898 AATCCC--ACAAG--GGA----ATGAGGACATGTCCTGCAATTCTGAGTG D_melanogaster300082 ATGTGTCCTGCAGTGCTGAGCTT--------------------------- E_telfairi300705 GATCCCC-GTGTG--GGA----GTGAGGACATGTCCTGCAATTCTGAATG E_caballus300235 AATCCCC-ACGTG--GGA----ATGAGGACATGTCCTGCAATTCTGAAGG E_europaeus300172 TGATCCCCACGTG--GGG----TTGAGGACAAGTCCTGCAATTCTGAAAG E_europaeus300563 TGATCCCCACGTG--GGGG---TTGAGGACAAGTCCTGCAATTCTGAAAG G_gorilla300768 AATCCCC-AAGTG--GGA----GTGAGGACATGTCCTGCAATTCTGAAGG H_sapiens300555 AATCCCC-AAGTG--GGA----GTGAGGACATGTCCTGCAATTCTGAAGG H_sapiens300641 AATCCCC-ATGTG--GTA----GTGAGGACATGTCCTGCAGTTCTGAAGG L_africana300498 GATCCCC-ATGTG--GGA----GTGAGGACATGTCCTGCAATTCTGA-GG M_mulatta300695 AATCCCC-ATGTG--GTA----GTGAGGGCATGTCCTGCAGTTCTGAAGA M_mulatta300728 AATCCCC-ATGTG--GGA----GTGAGGACATGTCCTGCAATTCTGAAGG M_murinus300443 AACCCCC-ACGTG--GGA----GTGAGGACATGTCCTGCAATTCTGAAGG M_musculus300931 AATCCCCCACAAG--GGA----ATGAGGACATGTCCTGCAATTCTGAATG O_cuniculus300439 AATCCCC-ATGTG--GGA----GTGAGGACATGTCCTGCAATTCTGAAGG O_garnettii300742 AACCCCC-ACGTG--GGA----GTGAGGACATGTCCTGCAATTCTGAAGG P_troglodytes300715 AATCCCC-AAGTG--GGA----GTGAGGACATGTCCTGCAATTCTGAAGG P_troglodytes300503 AATCCCC-ATGTG--GTA----GTGAGGACATGTCCTGCAGTTCTGAAGG P_pygmaeus300756 AATCCCC-AAGTG--GGA----GTGAGGACATGTCCTGCAATTCTGAAGG P_pygmaeus300615 AATCCCC-ATGTG--GTA----GTGAGGACATGTCCTGCAGTTCTGAAGG S_araneus300940 AATCCCC-ATGTG--GGA----ATGAGGACATGTCCTGCAATTCTGAAGG S_tridecemlineatus300297 AATCCCC-ACAAG--GAA----ATGAGGACATGTCCTGCAATTCTGAGTG S_tridecemlineatus300162 GAATAATTTGATG--ATAATAAAGGCAATCTCAATTGA------------ T_aestivum301239 GATTGGT-CATAG-TGCGC-CCATGCTGTC--ATTCTGCAATTCTGAGGA T_aestivum301240 GATTGGT-CGTTG-TGCGC-CCATGATGTC--ATTCTGCAATTCAGAGGA T_aestivum301251 GATTGGT-CGTAG-TGCGC-CCATGCTGTC--ATTCTGCAATTCTGAGGA T_aestivum301252 GATTGGT-CGTAG-TGCGC-CCATGCTATC--ATTCTGCAATTCTGAGGA T_aestivum301254 GATCGGT-TGCTA-TGCGT-CCATGCTGTC--ATTCTGCAATTCTGAGGT T_aestivum301255 GATCGGT-CGCTA-TGCGT-CCATGCTGTC--TTTCTGCAATTCTGAAGC T_aestivum301287 GATTGGT-CGCTA-TGTGT-CCATGCTGTC--ATTCTGCAATTCTGAGGC T_aestivum301341 GATTGGTGCACTC-TGTGTGCCATGCTGTGAAACTGTGCGATTCAGATGT T_aestivum301350 GATTGGTGCACTC-TGTGTGCCATGCTGTGAAACTGTGCGATTCAGATGT T_aestivum301505 GATTGGT-CGCTG-TGCGC-CCATGCTGTC--ATTCTGCAATTCTGAGGA T_aestivum301506 GATAGGTGCACTC-TGTGTGCCATGCTGTGAAAATCTGCAATTCTGATGT T_dicoccoides300990 GATTGGT-CGCTG-TGCGT-CCATGCTGTC--ATTCTGCAATTCTGAGGA T_dicoccoides300991 GATAGGTGCACTC-TGTGTGCCATGCTGTGAAAATCTGCAATTCTGATGT T_dicoccoides301036 GATTGGT-CGTAG-TGCGC-CCATGCTGTC--ATTCTGCAATTCTAAGGA T_dicoccoides301037 GATTGGT-CACAG-TGTGC-CCATGCTGTC--ATTCGGCAATTCTGAGGA T_dicoccoides301038 GATTGGT-CACAG-TGTGC-CCATGCTGTC--ATTCGGCAGTTCTGAGGA T_dicoccoides301063 GATTGGG-CGCTA-TGCGT-CCATGCTGTC--ATTCTGCAATTCTGAGGC T_dicoccoides301091 GATTGGTGCACTC-TGTGTGCCATGCTGTGAAAATGTGCGATTCTGATGT T_dicoccoides301093 GATCGGT-CGCTA-TGCGT-CCATGCTGCC--ATTCCGTAATTCTGAGGA T_dicoccoides301100 GATCGGT-CGCTA-TGCGT-CCATGCTGCC--ATTCCGTAATTCTGAGGA T_dicoccoides301124 GATAGGT-CGCTA-TGCGT-CCATGCTGTC--TTCCTGCAATTCTGAAGC T_dicoccoides301125 GATTGGT-CGCTA-AGCGC-CCATGCTGTC--ATTCTGCAATTCTGAGGT X_tropicalis300118 GAATCCCCTGATG--ACATCTTAATAAAACT-GATCGCTC---------- E_caballus300233 ----------------------- O_anatinus304393 GTCTTTCTGCAATTCTGAAGCCA A_tauschii300100 CC--------------------- A_tauschii300181 CC--------------------- A_tauschii300101 CAG-------------------- A_tauschii300121 CA--------------------- A_tauschii300167 CA--------------------- A_tauschii300168 TC--------------------- A_tauschii300180 CA--------------------- A_tauschii300594 CA--------------------- A_tauschii300593 CA--------------------- A_tauschii300592 CA--------------------- A_tauschii300589 CA--------------------- A_tauschii300588 CA--------------------- A_tauschii300568 CA--------------------- A_tauschii300565 CA--------------------- A_tauschii300542 CA--------------------- A_tauschii300509 CA--------------------- A_tauschii300476 CA--------------------- A_tauschii300432 CC--------------------- A_tauschii300300 CA--------------------- A_tauschii300046 CA--------------------- A_tauschii300057 CC--------------------- A_tauschii300099 CA--------------------- C_familiaris300331 GATA------------------- C_porcellus300898 GATT------------------- D_melanogaster300082 ----------------------- E_telfairi300705 GATT------------------- E_caballus300235 GATT------------------- E_europaeus300172 GGTT------------------- E_europaeus300563 GGTT------------------- G_gorilla300768 GATT------------------- H_sapiens300555 ----------------------- H_sapiens300641 GATT------------------- L_africana300498 GAT-------------------- M_mulatta300695 AA--------------------- M_mulatta300728 GA--------------------- M_murinus300443 GA--------------------- M_musculus300931 GGTT------------------- O_cuniculus300439 GATT------------------- O_garnettii300742 GA--------------------- P_troglodytes300715 GA--------------------- P_troglodytes300503 GATT------------------- P_pygmaeus300756 GA--------------------- P_pygmaeus300615 GATT------------------- S_araneus300940 GATT------------------- S_tridecemlineatus300297 GATT------------------- S_tridecemlineatus300162 ----------------------- T_aestivum301239 CA--------------------- T_aestivum301240 CA--------------------- T_aestivum301251 CA--------------------- T_aestivum301252 CA--------------------- T_aestivum301254 CA--------------------- T_aestivum301255 CA--------------------- T_aestivum301287 CA--------------------- T_aestivum301341 CC--------------------- T_aestivum301350 CC--------------------- T_aestivum301505 CA--------------------- T_aestivum301506 CC--------------------- T_dicoccoides300990 CA--------------------- T_dicoccoides300991 CC--------------------- T_dicoccoides301036 CA--------------------- T_dicoccoides301037 AA--------------------- T_dicoccoides301038 AA--------------------- T_dicoccoides301063 CA--------------------- T_dicoccoides301091 CC--------------------- T_dicoccoides301093 CA--------------------- T_dicoccoides301100 CA--------------------- T_dicoccoides301124 CA--------------------- T_dicoccoides301125 CA--------------------- X_tropicalis300118 -----------------------