Family: SNORD57

CLUSTAL W (1.83) multiple sequence alignment C_familiaris300449 -------------------------------------------------- C_familiaris300478 -------------------------------------------------- D_rerio300281 -------------------------------------------------- D_novemcinctus300139 -------------------------------------------------- E_telfairi300046 -------------------------------------------------- E_caballus300255 -------------------------------------------------- F_catus300322 -------------------------------------------------- G_gorilla300773 -------------------------------------------------- G_gorilla300774 -------------------------------------------------- H_sapiens300550 -------------------------------------------------- M_mulatta300723 -------------------------------------------------- M_murinus300491 -------------------------------------------------- M_musculus300732 -------------------------------------------------- M_lucifugus300743 -------------------------------------------------- M_lucifugus300998 -------------------------------------------------- O_anatinus302246 -------------------------------------------------- O_anatinus302469 -------------------------------------------------- O_cuniculus300437 -------------------------------------------------- P_troglodytes300710 -------------------------------------------------- P_pygmaeus300760 -------------------------------------------------- R_norvegicus300985 -------------------------------------------------- R_norvegicus300986 -------------------------------------------------- S_araneus301053 -------------------------------------------------- T_belangeri300304 -------------------------------------------------- P_troglodytes300724 -------------------------------------------------- P_pygmaeus300623 -------------------------------------------------- R_norvegicus300953 -------------------------------------------------- S_araneus301041 -------------------------------------------------- S_tridecemlineatus300313 -------------------------------------------------- T_nigroviridis300075 -------------------------------------------------- T_belangeri300340 -------------------------------------------------- X_tropicalis300039 CGGAGATGATGTCAATCTTTTGCCCTGACCTGAAGCCATGAGGCAAAAAC M_musculus300829 -------------------------------------------------- M_musculus300901 -------------------------------------------------- O_anatinus304448 -------------------------------------------------- O_cuniculus300182 -------------------------------------------------- O_cuniculus300406 -------------------------------------------------- O_garnettii300335 -------------------------------------------------- O_garnettii300482 -------------------------------------------------- O_garnettii300585 -------------------------------------------------- P_troglodytes300209 -------------------------------------------------- P_troglodytes300504 -------------------------------------------------- P_pygmaeus300213 -------------------------------------------------- P_pygmaeus300248 -------------------------------------------------- R_norvegicus300369 -------------------------------------------------- R_norvegicus300004 -------------------------------------------------- S_araneus300400 -------------------------------------------------- S_tridecemlineatus300022 -------------------------------------------------- S_tridecemlineatus300246 -------------------------------------------------- T_nigroviridis300154 -------------------------------------------------- T_nigroviridis300006 -------------------------------------------------- T_belangeri300243 -------------------------------------------------- X_tropicalis300018 -------------------------------------------------- S_cerevisiae300000 -------------------------------------------------- C_familiaris300449 -------------------------------------------------- C_familiaris300478 -------------------------------------------------- D_rerio300281 -------------------------------------------------- D_novemcinctus300139 -------------------------------------------------- E_telfairi300046 -------------------------------------------------- E_caballus300255 -------------------------------------------------- F_catus300322 -------------------------------------------------- G_gorilla300773 -------------------------------------------------- G_gorilla300774 -------------------------------------------------- H_sapiens300550 -------------------------------------------------- M_mulatta300723 -------------------------------------------------- M_murinus300491 -------------------------------------------------- M_musculus300732 -------------------------------------------------- M_lucifugus300743 -------------------------------------------------- M_lucifugus300998 -------------------------------------------------- O_anatinus302246 -------------------------------------------------- O_anatinus302469 -------------------------------------------------- O_cuniculus300437 -------------------------------------------------- P_troglodytes300710 -------------------------------------------------- P_pygmaeus300760 -------------------------------------------------- R_norvegicus300985 -------------------------------------------------- R_norvegicus300986 -------------------------------------------------- S_araneus301053 -------------------------------------------------- T_belangeri300304 -------------------------------------------------- P_troglodytes300724 -------------------------------------------------- P_pygmaeus300623 -------------------------------------------------- R_norvegicus300953 -------------------------------------------------- S_araneus301041 -------------------------------------------------- S_tridecemlineatus300313 -------------------------------------------------- T_nigroviridis300075 -------------------------------------------------- T_belangeri300340 -------------------------------------------------- X_tropicalis300039 TGATTTAATGAGCCTGATCCGGT-TGCAATTACAGTGCTTCATTTTGTGG M_musculus300829 --------------AAAGCAGGT-AGCAATTACAGTGCTTCATTTTGTGG M_musculus300901 --------------AAAGCAGGT-TACAAGTATAGCTCTTCATTTTGTGG O_anatinus304448 --------------AAAGCAGGT-TGCAATTACAGTGCTTCATTCTGTGG O_cuniculus300182 --------------AAAACAGTT-TGCAGTTATA---CTACATTTTGTGG O_cuniculus300406 --------------AAAGCAGGT-TGCAATTACAGTGCTTTATTTTGTGA O_garnettii300335 --------------TAGGCAGGT-TGCAATCATAGTGCTTCATTTGGG-G O_garnettii300482 --------------AAAGCAGGT-TGCAATTC---TGCTTCATTTTGT-- O_garnettii300585 --------------AAAGCAGGT-TGCAATTACAGTACTTCATTCTGTGG P_troglodytes300209 --------------AAAGCAAGC-TGGAATTGCAGTGCTTCATTTTGTGA P_troglodytes300504 --------------AAAGCAGGT-TGCAATTACAGTGCTTCATTTTGTGG P_pygmaeus300213 --------------AAAGCAAGC-TGCAATTACAATGCTTCATTTTGTGA P_pygmaeus300248 --------------AAAGCAGGT-TGCAATTACAGTGCTTCATTTTGTGG R_norvegicus300369 --------------AGAGCAGGT-AGCAATTACAGTGCTTCATTTTGTGG R_norvegicus300004 --------------TGAGCAGGT-AGCAATTACAGTGCTTCATTTTGTGG S_araneus300400 --------------TGAGCAGGT-TGCAATTCCAGTGTTTTGTTTTTGTG S_tridecemlineatus300022 --------------AAAGCAGAT-TGCTATTATGGTATTCCTTTTCTTGA S_tridecemlineatus300246 --------------AGAGCAGGT-TGCAATTACAGTGCTTCATTTTGTGG T_nigroviridis300154 --------------AAAGCAGGTCTGCAATTGCAGCAGTTCTTGTGGTGG T_nigroviridis300006 --------------AAAGCAGGTCTGCAATTGCAGCAGTTCTTGTGGTGG T_belangeri300243 --------------AAAGCAGGT-TGCAATTACAGTGCTTCATTTTGTGG X_tropicalis300018 --------------AAAGCAGGT-TGCAATTACAGTTCTTCATTCTGTGG S_cerevisiae300000 -------------------------------------------------- C_familiaris300449 ----------------------------------TGGAGGTGATGAACAG C_familiaris300478 ----------------------------------TGAAGGTGATGAACTG D_rerio300281 ----------------------------------TGTGAGTGATGACTCT D_novemcinctus300139 ----------------------------------TGGAGGTGAGGAGCTG E_telfairi300046 -------------------------------------------------- E_caballus300255 ----------------------------------TGGAGGTGATGAGCTG F_catus300322 -----------------------------------GTGCAATGATGCATA G_gorilla300773 -----------------------------------GTGCAATGATGTATT G_gorilla300774 -----------------------------------GTGCTGTGATGTATT H_sapiens300550 -----------------------------------GTGCAATGATGTATT M_mulatta300723 -----------------------------------GTGCGATGATGTATT M_murinus300491 -----------------------------------GTGCAATGATGCATT M_musculus300732 -----------------------------------GTGCGATGATGCATT M_lucifugus300743 -----------------------------------GTGCAATGATGCATT M_lucifugus300998 ----------------------------------------GTGCTGTATT O_anatinus302246 -----------------------------------GTGCCGTGATGGATT O_anatinus302469 -----------------------------------GTGACTTGGAGTATT O_cuniculus300437 -----------------------------------GTGCAGTGATGCATT P_troglodytes300710 -----------------------------------GTGCAATGATGTATT P_pygmaeus300760 -----------------------------------GTGCAATGATGTATT R_norvegicus300985 -----------------------------------GTGCAGTGATGTATT R_norvegicus300986 -----------------------------------GTGCAATGATGCATT S_araneus301053 -----------------------------------GTGCAGTGATGCATT T_belangeri300304 -----------------------------------GTGCAATGATGCATT P_troglodytes300724 ----------------------------------TGGAGGTGATGAACTG P_pygmaeus300623 ----------------------------------TGGAGGTGATGAACTG R_norvegicus300953 ----------------------------------TGGAGATGATGAACTG S_araneus301041 ----------------------------------TGGAGATGATGAACTC S_tridecemlineatus300313 ----------------------------------TGGAGATGATGAACCA T_nigroviridis300075 ----------------------------------TGTAAGTGATGACCCC T_belangeri300340 ----------------------------------TGGACATGATGAATTG X_tropicalis300039 AA------GTACTG----CCATTAATCCTGCT---GAAAGAAAAGCTGTG M_musculus300829 GA------GTACTG----CCATTA-TCCTGCT---GAAAGAAAAGCCATG M_musculus300901 AA------TTACTGCTCTTTACTA-CCCTGCT---AAAGA-GCAGCCATG O_anatinus304448 GA------GTACTG----CCATTA-CCCTGCT---GAGAGTAAAGCTGTG O_cuniculus300182 CA------ATACTG----ATATTA-TCCTGCT---GAAA--GAAGCTGTG O_cuniculus300406 AA------GTACTG----TCATTA-TCCTGCT---GAAAGAAAAGCTGTG O_garnettii300335 GA-----AGTACTG-----CATTA-TCCTGGTTGGGGAAAAAAAGCTGTG O_garnettii300482 GG-----AGTATAG----TCATTA-TCTTGCT----GAAAAATATCTGTG O_garnettii300585 AA------GTATTG----CCATTA-TCCTGCT---GAAAGAAAAGCCGTG P_troglodytes300209 AATACTAAATACCA----TCATTA-TGCTGCT---GAAAGAAAAGCTGTT P_troglodytes300504 AA------GTACTG----CCATTA-TCCTGCT---GAAAGAAAAGCCGTG P_pygmaeus300213 AATACTAAATACCA----TCATTA-TCCTGCT---GAAAGAAAAGCTGTT P_pygmaeus300248 AA------GTACTG----CCATTA-TCCTGCT---GAAAGAAAAGCCGTG R_norvegicus300369 GA------GTACTG----CCATTAATCCTGCT---GAAAGAAAAGCCATG R_norvegicus300004 GA------GTACTG----CCATTAATCCTGCT---GAAAGAAAAGCCATG S_araneus300400 GG-----AGTACTG----GCATAA-CCCTGCT---GAAAACAAATCTGTG S_tridecemlineatus300022 AA------ATATT----TCAACTA-TCCTACT---AAAA---CAGGCATG S_tridecemlineatus300246 AA------GTACTG----CCATTA-TCCTGCT---GAAAGAAAAGCTATG T_nigroviridis300154 AG-------TGCTG----TCATTAACCCTGCT---GAGAGCATCTTCATC T_nigroviridis300006 AG-------TGCTG----TCATTAACCCTGCT---GAGAGCATCTTCATC T_belangeri300243 AA------GTACTG----CCATTA-TCCTGCT---GAAAGAAAAGCTGTG X_tropicalis300018 AG------TTGCTG----TCATTA-TCCTGCT---GAGAATAAAGATGTC S_cerevisiae300000 ---------------------------------TTGTATGATGAGGAACC C_familiaris300449 GCT----TA-GCCTGACTTTGTAGAGTGGAGG--CAAAAAA---C-TGAT C_familiaris300478 TTT----TA-GCCTGACTTTGCATCGCAGAGG--CAAAAAAA--C-TAAT D_rerio300281 TTC-----C-TCCTGACTCCT--ACGTGGAGG--CGAAAAC-----TGAT D_novemcinctus300139 TCT----TA-GCCTGACCTTG-AAAGTAGGGG--CAAAAAA---C-TGGT E_telfairi300046 ------GGG-AGTTGACCTTGTAAAGTGAAGG--CAAAAAC--AC-TGAT E_caballus300255 TCT----TA-GCCTGACCTGGTAGAGTGGAGG--CAAAAAA---C-TGAT F_catus300322 TTATTTATCAACACATCATTCTGATA-AGATAGGTGTGTGGAAAACT-AA G_gorilla300773 TTATT---CAACACATCATTCTGAAA-GAAC----GTGTGGAAAACT-AA G_gorilla300774 T-----GTCAACACATCACTCTGAAG-AAAAGTATGTGGTGACTTCC-TG H_sapiens300550 TTATT---CAACACATCATTCTGAAA-GAAC----GTGTGGAAAACT-AA M_mulatta300723 TTATT---CAACACATCATTCTGAAA-GAACA--TATGTGGAAAAAT-AA M_murinus300491 TTATTCATCAACACATCATTCTGAAA-GCACAGATGTGTAGAATACTAAA M_musculus300732 TTATT---CAACACATCATTCTGAAA---ATAGATGTGTAGAGAAAT-GA M_lucifugus300743 CTATTCATCAACACATCATTCTGAAA-AGACAGGTGTGTAGAAAGTT-AA M_lucifugus300998 ------GTCAACACATCATTCTGAAG-AAAAGTATGTGGTGACGTCC-TG O_anatinus302246 TAACG-ATCGACACATCATTCCGAAACGAGCG---GTGTGGACAGCT-AA O_anatinus302469 TATTT--CCAACACGTCATTTTGAAACCCAAG---GTGTGGTTTTTTTAA O_cuniculus300437 TTATTTAACAACACATCATTCTGAACTCACAGA-TGTGTGGAGAACT-AA P_troglodytes300710 TTATT---CAACACATCATTCTGAAA-GAAC----GTGTGGAAAACT-AA P_pygmaeus300760 TTATT---CAACACATCATTCTGAAA-GAAC----GTGTGGAAAACT-AA R_norvegicus300985 T-----GTCAACACATCATTCTGAAG-GAAAG--TGTGGTGACGTCT-TA R_norvegicus300986 TTATTAATCAACACATCATTCTGAAA---GCAGATGTGTAGAGAAGT-AA S_araneus301053 ACATTAATCAACACATCATTCTGAAA-AGACAGATGTGTAGAAAACT-AA T_belangeri300304 TTATTCATCAACACATCATTCTGAAAAGCACAGATGTGTAGAAGACTTAA P_troglodytes300724 TCT----GA-GCCTGACCTTGTAGAATGGAGG--CAAAAAA--AC-TGAT P_pygmaeus300623 TCT----GA-GCCTGACCTTGTAGAATGGAGG--CAAAAAA--AC-TGAT R_norvegicus300953 ACT----CA-GCCTGACCTTCAGAAATGGAGG--TGATAAA--AC-TGAT S_araneus301041 TCTT---GG-GCCTGACCTTGTTGAGTGGAGGGGCAAAAAATAAT-TGAT S_tridecemlineatus300313 TCTTGCTTG-GCCTGACCTTGTGAAGTGGAGGCAAAAACAAAAAC-TGAT T_nigroviridis300075 TCT-----T-CCCTGATGTC----CCTGAAGG--TCAAAAC-----TGGT T_belangeri300340 TTC----TA-ACCTGACCTCGTAGA-TGGAGG--CAAAAAA--AC-TGAT X_tropicalis300039 TTAATCGTT-TT--GGTTTTGCCTTTATGGGGG-TAAAATCATGA-CAGA M_musculus300829 TTGGTTGTT-TCTGATTTTTGCTTTT---GGGGTAAAAATCGTGA-CACC M_musculus300901 TTGATGC-C-TC-TGATTTTACCTTTA-TGAAAGTAAAA--ATAA-CAGC O_anatinus304448 TTAAATATTGCTTTGGTCTTCACATTCATAGAGGTGAAGCCCTC--CAGT O_cuniculus300182 TTACTCATT-TT-CGATTTTGCCTAAAATGCAGGTAAAATCATGA-CAGA O_cuniculus300406 TTGGTCCTT-TT-TGATTTTGCCACTG-TGCTGGTAAAATCATGA-CAGA O_garnettii300335 CTAATCATT-TT-TGATTTTGCTTTTATGAGAA-TAAGATGATGGACAGA O_garnettii300482 TTAATCATT-TT--TACTTTGTCTCTATGAGGA-TAAAATAATGA-CAAA O_garnettii300585 TTTAATCAT-TTCCGGGTTTGCCTGTATGGGGG-TAAAATCCTAA-CAGA P_troglodytes300209 TTAATGATT-TT-TGATTTTGTCTTTGTGAGAG-TAAAATCACGA-CAGA P_troglodytes300504 TTAATCATT-TT-TGATTTTGCCTTTATGAGGG-TAAAATCATGA-CAGA P_pygmaeus300213 TTAATGATT-TT-TGATTTTGTCTTTGCGAGAG-TAAAATCATGA-CAGA P_pygmaeus300248 TTAATTATT-TT-TGATTTTGCCTTTGTGAGGG-TAAAATCATGA-CAGA R_norvegicus300369 TTGAT-GTT-TCTGATTTTTGCATTTATTGGAGTAAAAATCATGA-CACT R_norvegicus300004 TTGAT-GTT-TCTGATTTTTGCATTTATTGGAGTAAAAATCATGA-CACT S_araneus300400 CCAATCATT-TTCTTATTTTACTTTTTTTGGAGGTAAAATTATTG-CTGA S_tridecemlineatus300022 CTGATAAGT-TT-TTATTTTGCCTTTA-GGAGGTTAAAATCATGA-CAGA S_tridecemlineatus300246 TTGATCATT-TT-TGATTTTGCCT-TCTGGGGG-TAAAATCATGA-CAGA T_nigroviridis300154 CTCCTGCCG---GAGAGCTCACACTC------------------------ T_nigroviridis300006 CTCCTGCCG---GAGAGCTCACACTC------------------------ T_belangeri300243 TTGATCGTT-AT-TGATTTTGCCCATATGGGGG-TAAAATCAGGA-CAGA X_tropicalis300018 AGACTGAAT-----GGTTTCACCTTAACATGGG-GGAAATTGTTG-CTTC S_cerevisiae300000 AGATAGGGACAACAGATTCTCAAGTGACGAGGAACATCTTTTAAAGCCCA C_familiaris300449 TTAATGAGCCTGATCC---------------------------------- C_familiaris300478 ATAATAA-ATATTT------------------------------------ D_rerio300281 TTAATGAGCCTGACAC---------------------------------- D_novemcinctus300139 TTAATGAGCCTAATCC---------------------------------- E_telfairi300046 TTAATTAGCCTGATCC---------------------------------- E_caballus300255 TTAATGAGATGTGTGGAAAATTAGTACTGAGCACA--------------- F_catus300322 TGACTGAGCACA-------------------------------------- G_gorilla300773 TGACTGAGCACA-------------------------------------- G_gorilla300774 TGACTGAGCATG-------------------------------------- H_sapiens300550 TGACTGAGCACA-------------------------------------- M_mulatta300723 TGACTGAGCACA-------------------------------------- M_murinus300491 -GACTGAGCACA-------------------------------------- M_musculus300732 TAACTGAGCACA-------------------------------------- M_lucifugus300743 TGACTGAGCACG-------------------------------------- M_lucifugus300998 TGACTGAGCACA-------------------------------------- O_anatinus302246 TGACTGAGCACA-------------------------------------- O_anatinus302469 --ACTGAGCACA-------------------------------------- O_cuniculus300437 TGACTGAGCACA-------------------------------------- P_troglodytes300710 TGACTGAGCACA-------------------------------------- P_pygmaeus300760 TGACTGAGCACA-------------------------------------- R_norvegicus300985 TTACTGAGCACA-------------------------------------- R_norvegicus300986 TAACTGAGCACA-------------------------------------- S_araneus301053 TGACTGAGCATG-------------------------------------- T_belangeri300304 TGACTGAGCACAGCCTTAGCCTGACCTTAGTCGAGTGGAGGCAAAAAAAA P_troglodytes300724 TTAATGAGCCTGATCC---------------------------------- P_pygmaeus300623 TTAATGAGCCTGATCC---------------------------------- R_norvegicus300953 TTAATGAGCCTGATCC---------------------------------- S_araneus301041 TTAATGAGCCTGATCC---------------------------------- S_tridecemlineatus300313 TTAATGAGCCTGATCC---------------------------------- T_nigroviridis300075 TTAATGAGCCTGATGC---------------------------------- T_belangeri300340 TTAATGAGCCTGATCC---------------------------------- X_tropicalis300039 TTGACATGGACAATT----------------------------------- M_musculus300829 TTGACATGAACAGTT----------------------------------- M_musculus300901 CTGACAAAGACAGTC----------------------------------- O_anatinus304448 TTAACATGTACACAT----------------------------------- O_cuniculus300182 CTGACATGAACAATT----------------------------------- O_cuniculus300406 CTGACATCGACAATT----------------------------------- O_garnettii300335 TTGGCACAGTCAATT----------------------------------- O_garnettii300482 ATGACATGGACAATT----------------------------------- O_garnettii300585 TTGACACGGACAATT----------------------------------- P_troglodytes300209 TTGACATGGACAATT----------------------------------- P_troglodytes300504 TTGACATGGACAATT----------------------------------- P_pygmaeus300213 TTGACATGGACAATT----------------------------------- P_pygmaeus300248 TTGACATGGACAGTT----------------------------------- R_norvegicus300369 TGCATGGGGACAGTT----------------------------------- R_norvegicus300004 TGCATGGGGACAGTT----------------------------------- S_araneus300400 TTAGCACAGACAGTT----------------------------------- S_tridecemlineatus300022 TTGACAAA-ACAACA----------------------------------- S_tridecemlineatus300246 TTGACATGGACAATT----------------------------------- T_nigroviridis300154 -------------------------------------------------- T_nigroviridis300006 -------------------------------------------------- T_belangeri300243 TTGGCATGGACAATT----------------------------------- X_tropicalis300018 TTGACATTGACAACT----------------------------------- S_cerevisiae300000 GTTTTTAGTAGAGCTTAGGGCGCCTTTACTGACT---------------- C_familiaris300449 --------------------- C_familiaris300478 --------------------- D_rerio300281 --------------------- D_novemcinctus300139 --------------------- E_telfairi300046 --------------------- E_caballus300255 --------------------- F_catus300322 --------------------- G_gorilla300773 --------------------- G_gorilla300774 --------------------- H_sapiens300550 --------------------- M_mulatta300723 --------------------- M_murinus300491 --------------------- M_musculus300732 --------------------- M_lucifugus300743 --------------------- M_lucifugus300998 --------------------- O_anatinus302246 --------------------- O_anatinus302469 --------------------- O_cuniculus300437 --------------------- P_troglodytes300710 --------------------- P_pygmaeus300760 --------------------- R_norvegicus300985 --------------------- R_norvegicus300986 --------------------- S_araneus301053 --------------------- T_belangeri300304 CTGATTTAATGAGCCTGATCC P_troglodytes300724 --------------------- P_pygmaeus300623 --------------------- R_norvegicus300953 --------------------- S_araneus301041 --------------------- S_tridecemlineatus300313 --------------------- T_nigroviridis300075 --------------------- T_belangeri300340 --------------------- X_tropicalis300039 --------------------- M_musculus300829 --------------------- M_musculus300901 --------------------- O_anatinus304448 --------------------- O_cuniculus300182 --------------------- O_cuniculus300406 --------------------- O_garnettii300335 --------------------- O_garnettii300482 --------------------- O_garnettii300585 --------------------- P_troglodytes300209 --------------------- P_troglodytes300504 --------------------- P_pygmaeus300213 --------------------- P_pygmaeus300248 --------------------- R_norvegicus300369 --------------------- R_norvegicus300004 --------------------- S_araneus300400 --------------------- S_tridecemlineatus300022 --------------------- S_tridecemlineatus300246 --------------------- T_nigroviridis300154 --------------------- T_nigroviridis300006 --------------------- T_belangeri300243 --------------------- X_tropicalis300018 --------------------- S_cerevisiae300000 ---------------------