Family: SNORD38

CLUSTAL W (1.83) multiple sequence alignment C_familiaris300050 -------------------------------------------------- C_familiaris300279 -------------------------------------------------- C_familiaris300388 -------------------------------------------------- C_familiaris300394 -------------------------------------------------- C_familiaris300395 -------------------------------------------------- C_familiaris300396 -------------------------------------------------- C_porcellus300340 -------------------------------------------------- C_porcellus300459 -------------------------------------------------- C_porcellus300949 -------------------------------------------------- C_porcellus300950 -------------------------------------------------- E_telfairi300182 -------------------------------------------------- E_telfairi300521 -------------------------------------------------- E_telfairi300699 -------------------------------------------------- E_telfairi300700 -------------------------------------------------- E_caballus300187 -------------------------------------------------- E_caballus300318 -------------------------------------------------- E_caballus300319 -------------------------------------------------- E_europaeus300043 -------------------------------------------------- E_europaeus300177 -------------------------------------------------- E_europaeus300244 -------------------------------------------------- E_europaeus300400 -------------------------------------------------- E_europaeus300710 -------------------------------------------------- E_europaeus300711 -------------------------------------------------- E_europaeus300712 -------------------------------------------------- F_catus300126 -------------------------------------------------- F_catus300196 -------------------------------------------------- F_catus300309 -------------------------------------------------- G_gallus300104 -------------------------------------------------- G_gallus300105 -------------------------------------------------- G_gorilla300848 -------------------------------------------------- G_gorilla300849 -------------------------------------------------- G_gorilla300417 -------------------------------------------------- G_gorilla300418 -------------------------------------------------- G_gorilla300419 -------------------------------------------------- G_gorilla300420 -------------------------------------------------- G_gorilla300491 -------------------------------------------------- G_gorilla300789 -------------------------------------------------- HATGGTGTTAGATCCTTCCTTGGATGTCTG -------------------------------------------------- A_tauschii300179 ----------------------------GCCCGGTGATGACTAATTTAA- A_tauschii300201 ----------------------------TGGCTATGATGATAAATTTAA- A_tauschii300202 ----------------------------TGCAAATGATGATAAATTTAA- A_tauschii300209 ----------------------------TGGTGATGATGATAAATTTAA- A_tauschii300235 ----------------------------TGGCGATGATGATAGAACTAA- A_thaliana300141 -----------------------------GTTAATGATGATAAATCCAAA A_thaliana300142 --------------------------TCGGTTGATGAGGATTATATTAA- A_thaliana300143 -----------------------------GTCGATGAGGATAAGATGAA- A_thaliana300144 -----------------------------ATCAATGATGATAAACTTAA- C_elegans300051 -------------------------------------CAAGCCTCCTGGC C_familiaris300335 ----------------------------------------TCGCTATGAT C_familiaris300336 ----------------------------------------CCGCTGTGAT C_familiaris300337 ----------------------------------------TCACGATGAT C_familiaris300226 ----------------------------------------TTACAGTAAT C_porcellus300675 ----------------------------------------TCATTGTGAT C_porcellus300905 ----------------------------------------TCACTGTGAT C_porcellus300940 ----------------------------------------TCACTGTGAT C_intestinalis300009 CTGCTATGATGATGTATTCCAACATTCGCAGTTTCCACCAGACC-GAGAT C_intestinalis300010 CTGCTATGATGATGTATTCCAACATTCGCAGTTTCCACCAGACC-GAGAT C_intestinalis300011 CTGCTATGATGATGTATTCCAACATTCGCAGTTTCCACCAGACC-GAGAT C_intestinalis300012 CTGCTATGATGATGTATTCCAACATTCGCAGTTTCCACCAGACC-GAGAT C_intestinalis300013 CTGCTATGATGATGTATTCCAACATTCGCAGTTTCCACCAGACC-GAGAT C_intestinalis300015 CTGCTATGATGATGTATTCCAACATTCGCAGTTTCCACCAGACC-GAGAT C_intestinalis300022 CTGCTATGATGATGTATTCCAACATTCGCAGTTTCCACCAGACC-GAGAT C_intestinalis300023 CTGCTATGATGATGTATTCCAACATTCGCAGTTTCCACCAGACC-GAGAT C_intestinalis300024 CTGCTATGATGATGTATTCCAACATTCGCAGTTTCCACCAGACC-GAGAT C_intestinalis300014 CTGCTATGATGATGTATTCCAACATTCGCAGTTTCCACCAGACC-GAGAT C_savignyi300003 CTGCAATGATGATGTATCCCAACATTCGCAGTTTCCACCAGACCAGAGAT C_savignyi300004 TTGCAATGATGATGTATCCCAACATTCGCAGTTTCCACCAGACCTGAGAT C_savignyi300005 TTGCAATGATGATGTATCCCAACATTCGCAGTTTCCACCAGACCTGAGAT C_savignyi300006 ATGCAATGATGATGTATCCCAACATTCGCAGTTTCCACCAGACCAGAGAT D_rerio300120 ----------------------------------------TCGCTATGAT D_rerio300121 ----------------------------------------TCGCTATGAT D_rerio300123 ----------------------------------------TCGCTGTGAT D_novemcinctus300109 ----------------------------------------TCACAGTGAT D_novemcinctus300252 ----------------------------------------TCACAATGAT D_novemcinctus300473 ----------------------------------------TCACAATGAT D_novemcinctus300601 ----------------------------------------TCACAGTGAT D_melanogaster300046 ----------------------------------------ATAAACTGAT D_melanogaster300047 ----------------------------------------TTTTACTGAT E_telfairi300200 ----------------------------------------TCACAATGAT E_telfairi300412 ----------------------------------------TTGCTGTGAT E_telfairi300572 ----------------------------------------TCACTGTGAT E_telfairi300688 ----------------------------------------TCACAATGAT E_telfairi300689 ----------------------------------------TCGCTATGAT E_telfairi300690 ----------------------------------------TTGCTATGAT E_caballus300311 ----------------------------------------TTACTATGGT E_caballus300298 ----------------------------------------TCACAGTGAT E_caballus300299 ----------------------------------------CCGCTGTGAT E_caballus300300 ----------------------------------------TCGCTGTGAT E_caballus300310 ----------------------------------------TCATTATGGT E_europaeus300152 ----------------------------------------TCACTGTGAT E_europaeus300283 ---------------------------------------------TCGTT E_europaeus300499 ----------------------------------------TCACAATGAT E_europaeus300632 ----------------------------------------TCGCTATGAT E_europaeus300329 ----------------------------------------TCACAATGAT F_catus300225 ----------------------------------------TCATTATGAT F_catus300226 ----------------------------------------TCACTCTGTT F_catus300317 ----------------------------------------TCACAATGAT F_catus300318 ----------------------------------------CTGCTATGAT F_catus300319 ----------------------------------------TCGCTATGAT G_gallus300069 -------------------------------------------------- G_gallus300068 -------------------------------------------------- G_gallus300070 -------------------------------------------------- G_aculeatus300086 ----------------------------------------TCGCTGTGAT C_familiaris300050 ---------------------GGTCGATGATGAG--CTGGCATGTATT-- C_familiaris300279 ---------------------GGTCAGCAATGTG--ATGGCCTGTGTTAG C_familiaris300388 ---------------------AGTCAGTGATGTG--ATGCTATGT-TTAC C_familiaris300394 ---------------------GGTCAATGATGTG--ATGGCATGTATTAG C_familiaris300395 ---------------------GGTCAGTGATGTG--TTGGCATGTATTAC C_familiaris300396 ---------------------GGTCGATGATGAG--CTGGCATGTATT-- C_porcellus300340 ---------------------GGTCAGTGATGAG--ATGGCATGTATT-- C_porcellus300459 ---------------------GGTCAGTGATGAG--ATGGCATGTATT-- C_porcellus300949 ---------------------GGTCAATGATGTA--TTGGCATGTATTAT C_porcellus300950 ---------------------GGTCAGTGATGTC--ATGGCATGTATTAG E_telfairi300182 ---------------------GGTCAATGATGAG--TTGGCATGTATT-- E_telfairi300521 ---------------------GGTCAATGATGAG--TTGGCATGTATT-- E_telfairi300699 ---------------------GGTCAATGATGTG--TTGGCATGTATTAT E_telfairi300700 ---------------------GGTCTATGATGAG--TTGGCATGTATT-- E_caballus300187 ---------------------GGTCGATGATGAG--CCGGCATGTATT-- E_caballus300318 ---------------------GGTCAGTGATGTG--ATGGCATGTATTAA E_caballus300319 ---------------------GGTCAATGATGTG--TTGGCATGTATTAT E_europaeus300043 ---------------------GGTCAATGATGTT--TTGGCATGTATTAT E_europaeus300177 ---------------------GGCTAGTGATGAG--ATGGCATATATT-- E_europaeus300244 ---------------------GGTCAAGGATGCT--CTG-CATGTATTAT E_europaeus300400 ---------------------GGTCAATGATGAC--ACGGCATGTATT-- E_europaeus300710 ---------------------GGTCAATGATGTT--TTGGCATGTATTAT E_europaeus300711 ---------------------GGTCTGTGATGTTTTATGGCATGTATTAG E_europaeus300712 ---------------------GGTCGATGATGTT--TTGGCATGTATTAT F_catus300126 ---------------------GGTCAATGATGAG--CTGGCATGTATT-- F_catus300196 ---------------------AGTCAGCGATGTG--ACGGCACGTATTAG F_catus300309 ---------------------GGTCGGTGATGTG--GTGGCATGTGTTAG G_gallus300104 ---------------------GGTCTGTGATGAGTTTTGGCATGTATTAT G_gallus300105 ---------------------GGTCAGTGATGATTGGTGGCATGTATTAT G_gorilla300848 ---------------------GGTCAATGATGTC--GTGGCATGTATTAG G_gorilla300849 ---------------------GGTCAATGATGTA--ATGGCATGTATTAG G_gorilla300417 ---------------------GGTCAATGATGTG--TTGGCATGTATTAT G_gorilla300418 ---------------------GGTCAGTGATGTA--ATGGCATGTATTAG G_gorilla300419 ---------------------GGTCAATGATGAG--TTGGCATGTATT-- G_gorilla300420 ---------------------GGTCAA-AGTGTG--TTGACATGTATTAC G_gorilla300491 ---------------------GGTCAATGATGTA--ATGGCATGTATTAC G_gorilla300789 ---------------------GGTCAATGATGAG--CTGACATGTATT-- HATGGTGTTAGATCCTTCCTTGGATGTCTG -------------------------------------------------- A_tauschii300179 GGCCTGTTTCTCAAAA-----CATCCGCAGTTGCCGCATATGTGCTTTCT A_tauschii300201 GGCTTGTTTCTCAAAA-----CATTCGCAGATGCCGCCTAAGAGCTTTCG A_tauschii300202 GGCTTGTTTCTCAAA------CATTCGCAGTTGCCGCCTAAGAGATTTCG A_tauschii300209 GGCTTGTTTCTCAAAA-----CATTCGCAGATGCCGCCTAAGAGCTTTCG A_tauschii300235 GGCTTGTTTCTCAAAA-----CATTCGCAGATGCCGCCTAAGAGCTTTCG A_thaliana300141 GGCTTGTTTTTCAAA------CATTCGCAGTGGCCGCCTAAGAGCTTTCG A_thaliana300142 GGCTTGTTTCTCAAAA-----CATTCGCAGTGGCCGCCTAA-AGCTTTCG A_thaliana300143 GGCTTGTTTCTCAAAA-----CATTCGCAGTGGCCGCCTAA-GGCTTTCG A_thaliana300144 GGCTTGTTTCTCAAAA-----CATTCGCAGTGGCCGCCTAA-AGCTTTCG C_elegans300051 GCTGCTATTAGCCGGGAT--TCATAGGCTGGCGATGATTGAGATTGTTCC C_familiaris300335 GA--TTGATTCTTTAA----ACATTCGTAGTTTCCACCAAAAGCTTA--- C_familiaris300336 GA--TATGACCTAAA-----CCATTCGTAGTTTCCACCAGAAGA------ C_familiaris300337 GAA-TGG--TCCAAA------CATTCGCGGTTTCCACCAGAAT------- C_familiaris300226 GAA-TGG--TCCAAA------CATCTGACATTTACACCAGAATTT----- C_porcellus300675 GA--TGGATTCCAAAA-----CATTTGAAATTTCCATCCGAAAGACTT-T C_porcellus300905 GA--TGGATTCCAAAAA---CCATTCGTAGTTTCCACCAGAAAT------ C_porcellus300940 GA--TTGATATCCAAA-----CATTCGCAGTTTCCACCAGAAAGGTTTTC C_intestinalis300009 AAACTTAATATACAGGAAGGTAAAACTTGCTGTATATTAAGCTAACTCTC C_intestinalis300010 AAACTTAATATACAGGAAGGTAAAACTTGCTGTATATTAAGCTAACTCTC C_intestinalis300011 AAACTTAATATACAGGAAGGTAAAACTTGCTGTATATTAAGCCAACTCTC C_intestinalis300012 AAACTTAATATACAGGAAGGTAAAACTTGCTGTATATTAAGCTAACTCTC C_intestinalis300013 AAACTTAATATACAGGAAGGTAAAACTTGCTGTATATTAAGCCAACTCTC C_intestinalis300015 AAACTTAATATACAGGAAGGTAAAACTTGCTGTATATTAAGCCAACTCTC C_intestinalis300022 AAACTTAATATACAGGAAGGTAAAACTTGCTGTATATTAAGCCAACTCTC C_intestinalis300023 AAACTTAATATACAGGAAGGTAAAACTTGCTGTATATTAAGCCAACTCTC C_intestinalis300024 AAACTTAATATACAGGAAGGTAAAACTTGCTGTATATTAAGCCAACTCTC C_intestinalis300014 AAACTTAATATACAGGAAGGTAAAACTTGCTGTATATTAAGCCAACTCTC C_savignyi300003 AAACTTAATATACAGGAGGGTAAAACTTGCTGTATATTATGTTGATTCTC C_savignyi300004 AAACTTAATATACAGGAGGATAAAACTTGCTGTATATTTTGTTGATTCTC C_savignyi300005 AAACTTAATATACAGGAGGATAAAACCTGCTGTATATTTTGTTGATTCTC C_savignyi300006 AAACTTAATATACAGGAGGATAAAACTTGCTGTATATTATGTTGATTCTC D_rerio300120 GAAGTTTATTCCT-TG----CCATTCGTAGTTTCCACCAGAGGTTGAA-A D_rerio300121 GAAGTTTATTCCT-TG----CCATTCGTAGTTTCCACCAGAGGTTGAA-A D_rerio300123 GAAGTTTATTCCT-TG----CCATTCGTAGTTTCCACCAGAGGTTGAA-A D_novemcinctus300109 GAA-TTG--TCCAAA------CATTCACATTTTCCACCAGAATTT----- D_novemcinctus300252 GAA-TTG--TCCAAA------CATTCGCAGTTTCCACCAGAATTT----- D_novemcinctus300473 GAAACTG--TCCAAA------CATTCACAGTTTCCACCAAAATTC----- D_novemcinctus300601 GAA-TTG--CCCAAA------CATTCGCAGTTTCCACCAGAATTT----- D_melanogaster300046 GA--TTACCTTAAACA----CCTTTTGCGGTTTCCACCAGAAAGCTTC-G D_melanogaster300047 GA--TTAACTTCAACA----CCTTTTGCGGTTTCCACCAGAAAGCTTC-G E_telfairi300200 GAA-TGG--TCCAAAA-----CATTCGCGGTTTCCACCAGAAT------- E_telfairi300412 GA--TTGATTCCT-AC----CCATTCATAGTTTCCACCAAAAGCTTTG-- E_telfairi300572 GA--CTGACTTCCAA------CATTCGCAGTTTCCACCAGAAGGGTTTCC E_telfairi300688 GAA-GGG--TCCCAAA-----CATTCGCAGTTTCCACCAGAAT------- E_telfairi300689 GA--TGGATTCCATAA----CCATTCGTAGTTTCCACCAGAAATC----- E_telfairi300690 GA--TTGATTCCT-AA----CCATTCGTAGTTTCCACCAAAAGCTTTG-- E_caballus300311 GC--TGGTCTTCCAG------CACTCGCAGTTTCCACCAGAAGCGTTTTC E_caballus300298 GAA-TGG--TCCAAA------CATTCGCGGTTTCCACCAGAAT------- E_caballus300299 GA--TGGATTCCAAAA----CCATTCGTAGTTTCCACCAGAAG------- E_caballus300300 GA--ATGATTCTT-AA----ACATTCGTAGTTTCCACCAAAAGCTTA--- E_caballus300310 GC--TTAATTTACAAA-----CATTCA--GTTTCCACCAGAAAAGTTT-T E_europaeus300152 GA--TCGATTTCCAA------CATTCGCAGTTTCCACCAGAAAG--TTGG E_europaeus300283 AAGATTCATTTTA-----------TTGTAGTTTCCACCAGAACTC----- E_europaeus300499 GAA-TGG--TCCAAA------CATTCGCGGTTTCCACCAGAATTT----- E_europaeus300632 GA--ATGATTATTTAA----ACATTCGTAGTTTCCACCAAAAGCTTTT-- E_europaeus300329 GAG-TGG--CCCA-A------CACGTGCAGTTGACACCAGAATTT----- F_catus300225 GA--TTAATTTCTAAA-----CATTCACAGGTTTCACTAGAAGGGTTT-T F_catus300226 GA--TAAGCACCA-------GCATTGGCAGTTTCCTCCAGAACGGTTT-T F_catus300317 GAA-TGG--TCCATA------CATTCGCGGTTTCCACCAGAACTT----- F_catus300318 GA--TCGATTCCAAAA----CCATTCGTAGTTTCCACCAGAAG------- F_catus300319 GA--GTGATTCTT-AA----ACATTCGTAGTTTCCACCAAAAGCTTAA-- G_gallus300069 -------------------------------------------------- G_gallus300068 -------------------------------------------------- G_gallus300070 -------------------------------------------------- G_aculeatus300086 GAGGTC-ATTTCC-TG----CCATTCGTAGTTTCCACCAGAGGTCCAACG C_familiaris300050 CTGAA----TCTGAAGTTGATGATT-A---CTCCTTCAGCTCTAGAATTA C_familiaris300279 CTGAA----TCCAAAGTTGATG-------------TAAATTCTAAAATTA C_familiaris300388 CTAAA----CCTAAAGTTGATG-------------TAAATTCTAAAATTA C_familiaris300394 CTGAA----TCCAAAGTTGATG-------------TCAATTGTAAGATTA C_familiaris300395 CTGAC----TAAATGGCTGATGTGT-GATAACACA--AGCTCTAGAATTA C_familiaris300396 CTGAA----TCTGCAGTTGGTGATT-A---CTCCTTCAGCTCTAGAATTA C_porcellus300340 CTGAA----TCTAAAGTTGATTATT-A---CTGCTTTAGCTCTAGAATTA C_porcellus300459 CTGAA----TCTAAAGTTGATTATT-A---CTGCTTTAGCTCTAGAATTA C_porcellus300949 CTGA-----TTTACTGCTGATGTGT-AATAACACTTTAGCTCTAGAATTA C_porcellus300950 CTGAA----TGTGCAGTTGATG-------------TGAATTCTGAAATTA E_telfairi300182 CTGAA----TCTAAAGTTGATTATT-G---CTTCTTTAGCTCTAGAATTA E_telfairi300521 CTGAA----TCTAAAGTTGATTATT-G---CTTCTTTAGCTCTAGAATTA E_telfairi300699 CTGAA----TTTTCTGCTGATGTGTGAATAACACTT-AGCTCTAG--TTA E_telfairi300700 CTGAA----ACTAAACTTGATTATT-A---CTATTTTAGCTCTAGAATTA E_caballus300187 CTGAA----TCTAAAGTTGATTATT-A---CTACTTCAGCTCTAGAATTA E_caballus300318 CTGAA----TCCAAAGTTGATG-------------TAAGTTCTAAAATTA E_caballus300319 CTGAA----TTTATGGCTGATGTGT-AATAACACTTTAGCTCTAGAATTA E_europaeus300043 CTGAT----ATTAAAGCTGATGTGT--ATACTACTTTAG--GAAAAAAGA E_europaeus300177 CTGAA----TCTAAAGTTAATTAAT-----TTACTTTAGCTCTAGAATTA E_europaeus300244 CTGAC----ATGAAAGCTGATGTGG--AGAACACT--GGCTCTGGGATTA E_europaeus300400 CTGAA----TCTAAAGTTGATTAAT-----TTACTTCAGCTCTAGAATTA E_europaeus300710 CTGAC----GTTAAAGCTGATGTGT--ATAGCACTTTAGCTCTAGAATTA E_europaeus300711 CTGAA----TCCAGAGTTGATG-------------TAAATTCTGAAATAA E_europaeus300712 CTGAC-----TTACAGCTGATGTGT--ATAACACTTTAGCTCTAGAATTA F_catus300126 CTGAA----TCCGAAGTTGATTATT-A---CTACGTTAGCTCTAGAATTA F_catus300196 CCGAA----TCCAGAGTTGATG-------------TAAATTCTAAAATGA F_catus300309 TTGAA----TTCACAGTTGAGG-------------TCAATTCTAAAATTA G_gallus300104 CTGAG----CATAAGTGTGAAGATT-ATCAGT---TTAGCTCTAGAATTA G_gallus300105 CTGA-----TGTAAAGGTGATGTTT-ATCATCACATTAGCTCTAGAATTA G_gorilla300848 CTGAA----TCCAAAGTTGATG-------------TGAGTTCCAAAATTA G_gorilla300849 CTGAA----TCCAGAGTTGATA-------------TGAGTTCTAAAATTA G_gorilla300417 CTGAA----TCTATTGCTGATGTGT-AATAACACTTTAGCTCTAGAATTA G_gorilla300418 CTGAA----TCTAAAGTTGATG-------------TGAGTTCTAAAATTA G_gorilla300419 CTGAA----TCTAAAGTTGATTATT-A---CTACTTTAGCTCTAGAATTA G_gorilla300420 CTGAA----TTTATTGCTGATGTAT-AATAACACTTTAACTCTAAAATAA G_gorilla300491 CTGAA----TCCAAAGTTGATG-------------TGAATTCTAAAATTA G_gorilla300789 CTGAA----TCTAAAGTTGATTATT-A---GTACTTTAGTTCTAGAATTA HATGGTGTTAGATCCTTCCTTGGATGTCTG -------------------------------------------------- A_tauschii300179 CCCT--GCCAGGCTTGAGAGCTAATGCCG-TTAGATCCTTCCTTGGGTGT A_tauschii300201 CCCT--GACAGGCTTGAGAGCTAATGCTG-TTAATTCCTTCCTTGGATGT A_tauschii300202 CCCT--GCCAGGCTTGAGAGATGATGCTG-CTAGATTCTTCCTTGGATGT A_tauschii300209 CCCA--GCCAGGCTTGAGAGCTAATGCTG-CTAATTCCTTCCTTGGATGT A_tauschii300235 CCCT--GCCAGGCTTGAGAGCTAATGCTG-CTAATTCCTTCCTTGGATGT A_thaliana300141 CCTTTCGCCAGGCTTGAGAGTTAATGCTG-TTTTATCCTTCCTTGGATGT A_thaliana300142 CCTTTCGCCAGGCTTGAGAGCTAATGCAG-CTTTATCCTTCCTTGGATGT A_thaliana300143 CCTTTCGCCGGGCTTGAGAGCTTATGATGTTTTTATCCTTCCTTGGATGT A_thaliana300144 CCTTTCGCCGGGCTTGAGAGTTAATGCAGCTTTTATCCTTCCTTGGATGT C_elegans300051 CACAC-GCAATTTCTCCTGATCCACATGAAGGCTAAACTTCCTTGGACGT C_familiaris300335 -GCT--------AATGATGGTCCAA------------CTTCCTTGGATGT C_familiaris300336 -TTT--------TGTGTTGGCCAACT----------CCTTCCTTGGATGT C_familiaris300337 TCCA--------CGTGTTGGCA--ACTAG----CTTCCTTCCTTGGATGT C_familiaris300226 TAGA--------TGTGCTGGCA-ACTAAC----TTTCCTTCCTTGGATGT C_porcellus300675 TTCT--------CATGTTGGCCAGT-----------TTTTCTTTGGATGT C_porcellus300905 --TT--------TGTGTTGGCTAGTT----------CCTTCCTTGGATGT C_porcellus300940 C--T--------CATGTTGGTTGT------------TCTTCCTTGGATGT C_intestinalis300009 -ATT--------AATGATGGTTTAACGT-------TCCTTCCTTGGATGT C_intestinalis300010 -ATT--------AATGATGGTTTAACGT-------TCCTTCCTTGGATGT C_intestinalis300011 -ATT--------AATGATGGTTTAACGT-------TCCTTCCTTGGATGT C_intestinalis300012 -ATT--------AATGATGGTTTAACGT-------TCCTTCCTTGGATGT C_intestinalis300013 -ATT--------AATGATGGTTTAACGT-------TCCTTCCATGGATGT C_intestinalis300015 -ATT--------AATGATGGTTTAACGT-------TCCTTCCTTGGATGT C_intestinalis300022 -ATT--------AATGATGGTTTAACGT-------TCCTTCCTTGGATGT C_intestinalis300023 -ATT--------AATGATGGTTTAACGT-------TCCTTCCTTGGATGT C_intestinalis300024 -ATT--------AATGATGGTTTAACGT-------TCCTTCCTTGGATGT C_intestinalis300014 -ATT--------AATGATGGTTTAACGT-------TCCTTCCTTGGATGT C_savignyi300003 GATT--------TATGATGGTTTAATGT-------TCCTTCCTTGGATGT C_savignyi300004 GATT--------TATGATGGTTTAATGT-------TCCTTCCTTGGATGT C_savignyi300005 GATT--------TATGATGGTTTAATGT-------TCCTTCCTTGGATGT C_savignyi300006 GATT--------TATGATGGTTTAATGT-------TCCTTCCTTGGATGT D_rerio300120 AACC--------AAAGATGGCCCAAGTA--------CCTTCCTTGGATGT D_rerio300121 AACC--------AAAGATGGTCCAAGCA--------CCTTCCTTGGATGT D_rerio300123 AACC--------AAAGATGGCCCAAGTA--------CCTTCCTTGGATGT D_novemcinctus300109 AACT--------TGTGTTTGTACAC-TAG----CTTCCTTCCTTGGATGT D_novemcinctus300252 AACT--------TGTGTTGGCATAGGTAC----CTTCCTTCCTTGGATGT D_novemcinctus300473 ACCT--------TGTGTTGGAA--CATCA----GCTTCTTCCCGGGATGT D_novemcinctus300601 AACT--------TGTGTTGGCATAGGTAG----CTTCCTTCCTTGGATGT D_melanogaster300046 GCTT--------AAGGATGGT--------------------CTAAGGCGT D_melanogaster300047 GCTT--------AATGATGGT--------------------CTAAGGCGT E_telfairi300200 GACT--------TGTGTTGGC-------------TTCCTTCCTTGGATGT E_telfairi300412 TGCT--------CATAATGGTTAAA------------CTTCCTTGGATGT E_telfairi300572 CCCT--------TATGTTGTGCTA------------TCTTCCTTGGATGT E_telfairi300688 GACT--------TGAGTTGGC-------------TTCCTTCCTTGGATGT E_telfairi300689 -ATT--------ACTGTTGGC-AGTT----------CCTTCCTTGGATGT E_telfairi300690 TGCT--------CATGATGGCTAAA------------CTTCCTTGGATGT E_caballus300311 CT-T--------GCTGTTGGGTAAA-----------CCTTCCTTGGATGT E_caballus300298 AACA--------AATGTTGGCA--GCTAG----CTTCCTTCCTTGGATGT E_caballus300299 -TCT--------TGTGTTGGCCAATT----------CCTTCCTTGGATGT E_caballus300300 -GCT--------AATGATGGCCCAA------------CTTCCTTGGATGT E_caballus300310 TCTT--------TATGTTGACCAGT-----------TCTTCCTTGGATGT E_europaeus300152 C--T--------GATGTTGGTCGT------------TCTTCCTTGGGTGT E_europaeus300283 --TT--------TGTGTTGGCAAGTT----------CCTTCCTTGGATGT E_europaeus300499 TAGA--------TGT--TGGTA-ACTTA--------CCTTCCTTGGATGT E_europaeus300632 -GCT--------AATGATGGCCAAA------------CTTCCTTGGATGT E_europaeus300329 CAGA--------TGT--TGGCA-ACTA----------CCTCCTTGGATGC F_catus300225 TCCT--------TATGTTGGCCGGT-----------TCTCCCTTAGATGA F_catus300226 CCTT--------AGTGCTGGGTAAA-----------CCAACCTTGGATGT F_catus300317 CAGA--------TGT--TGGCA-ACTTAG----ATTCCTTCCTTGGATGT F_catus300318 -CCT--------TGTGTTGGCCAATT----------CCTTCCTTGGATGT F_catus300319 -GCT--------GATGATGGTCTAA------------CTTCCTTGGATGT G_gallus300069 -------------------------------------------------- G_gallus300068 -------------------------------------------------- G_gallus300070 -------------------------------------------------- G_aculeatus300086 GGCC--------GATGACGGTCCAA--A--------CCTTCCTTGGATGT C_familiaris300050 CTCTGAGACCTG-- C_familiaris300279 CACGAAAACCTT-- C_familiaris300388 CA--GAGGCCTT-- C_familiaris300394 CACTGAGACCTT-- C_familiaris300395 CGCTGAGACCTT-- C_familiaris300396 CTCTGAGACCTG-- C_porcellus300340 CTCTGAGACCTG-- C_porcellus300459 CTCTGAGACCTG-- C_porcellus300949 CGCTGAGACCTT-- C_porcellus300950 CCCTGAGACCTT-- E_telfairi300182 CTCTGAGACCTG-- E_telfairi300521 CTCTGAGACCTG-- E_telfairi300699 CGCTGAGACCTT-- E_telfairi300700 CTCTGAGACCTA-- E_caballus300187 CTCTGAGACCTG-- E_caballus300318 CACTGAGACCTT-- E_caballus300319 CGCTGAGACCTT-- E_europaeus300043 AAAGAAAATCTAA- E_europaeus300177 CTCTGAGACCTT-- E_europaeus300244 CACTGAGACCTT-- E_europaeus300400 CTCTGAGACCTA-- E_europaeus300710 CGCTGAGACCTT-- E_europaeus300711 CACTGAGACCTT-- E_europaeus300712 CGCTGAGACCTT-- F_catus300126 CTCTGAGACCTG-- F_catus300196 CA--GTGACCTT-- F_catus300309 CACTAAACCCTT-- G_gallus300104 CTCTGAGACCTT-- G_gallus300105 CTCTGAGACCCA-- G_gorilla300848 TACTGAGACTTT-- G_gorilla300849 CACTGAAGCTGG-- G_gorilla300417 CTCTGAGACCTT-- G_gorilla300418 CACTGAGACCTT-- G_gorilla300419 CTCTGAGACCTG-- G_gorilla300420 TAT--AGCTTTTGG G_gorilla300491 CACCAAGGCCTT-- G_gorilla300789 CT--GAGACATG-- HATGGTGTTAGATCCTTCCTTGGATGTCTG -------------- A_tauschii300179 CTGAGGGC------ A_tauschii300201 CCGAGCCT------ A_tauschii300202 CTGATGCA------ A_tauschii300209 CTGAGCCT------ A_tauschii300235 CTGAGCCA------ A_thaliana300141 CTGAAA-------- A_thaliana300142 CTGAAA-------- A_thaliana300143 CTGAGA-------- A_thaliana300144 CTGAGA-------- C_elegans300051 CTGAGCCGC----- C_familiaris300335 CTGAGCGA------ C_familiaris300336 CTGAGCGA------ C_familiaris300337 CTGAGTGA------ C_familiaris300226 CTGAGCGA------ C_porcellus300675 CTGAAAAA------ C_porcellus300905 CTGAGTGA------ C_porcellus300940 CTGAGTGA------ C_intestinalis300009 CTGAGCAG------ C_intestinalis300010 CTGAGCAG------ C_intestinalis300011 CTGAGCAG------ C_intestinalis300012 CTGAGCAG------ C_intestinalis300013 CTGAGCAG------ C_intestinalis300015 CTGAGCAG------ C_intestinalis300022 CTGAGCAG------ C_intestinalis300023 CTGAGCAG------ C_intestinalis300024 CTGAGCAG------ C_intestinalis300014 CTGAGCAG------ C_savignyi300003 CTGAGCAG------ C_savignyi300004 CTGAGCAA------ C_savignyi300005 CTGAGCAA------ C_savignyi300006 CTGAGCTT------ D_rerio300120 CTGAGCGA------ D_rerio300121 CTGAGCGA------ D_rerio300123 CTGAGCGT------ D_novemcinctus300109 CTGAGTGA------ D_novemcinctus300252 CTGAGTGA------ D_novemcinctus300473 CTGAGTGA------ D_novemcinctus300601 CTGAGTGA------ D_melanogaster300046 CTGACT-------- D_melanogaster300047 CTGACT-------- E_telfairi300200 CTGAGTGA------ E_telfairi300412 CTGAGAAA------ E_telfairi300572 CTGAGTGA------ E_telfairi300688 CTGAGGGA------ E_telfairi300689 CTGAGCGA------ E_telfairi300690 CTGAGCGA------ E_caballus300311 CCGAGTGA------ E_caballus300298 CTGAGTGA------ E_caballus300299 CTGAGCGA------ E_caballus300300 CTGAGCGA------ E_caballus300310 CTGAGTGA------ E_europaeus300152 CTGAGTGA------ E_europaeus300283 CTGAGCGA------ E_europaeus300499 CTGAGTGA------ E_europaeus300632 CTGAGCGA------ E_europaeus300329 ATGAGTGA------ F_catus300225 GTGA---------- F_catus300226 CTGAGTGA------ F_catus300317 CTGAGTGA------ F_catus300318 CTGAGCGA------ F_catus300319 CTGAGCGA------ G_gallus300069 -------------- G_gallus300068 -------------- G_gallus300070 -------------- G_aculeatus300086 CTGAGCGA------