Family: SNORD36

CLUSTAL W (1.83) multiple sequence alignment A_tauschii300450 ----------GTCAAATGGTGCTAAAACAAG--ATATTCCTGAGATTTTC C_elegans300038 ---------AAGCAAATGACGAAAT---CGCACCTCGGCCCGACTCCA-- C_familiaris300094 ------------AGGATTATAAACTTTAACAAGTCTCACCTGGAATCT-- C_familiaris300325 ---------TTGACAATGATGCAG---GAATTTCTTCACCTGGAATCT-- C_familiaris300326 ---------TTGCCAATGATGGTTA-CGAATTTCTTCACCTGAA-CCA-- C_porcellus300911 ----------TTGCAATGATGT-----GAATCTCTCA--CTGAATTAC-- C_porcellus300912 ---------TTGCCCATGATGGTTA-AGAATTTCTTCACCTGAA-TAA-- D_rerio300114 ----------CTGCAATGATGTCTT--GAATTTCTTCACCTGAATTCA-- D_rerio300115 ----------CAGCTATGATGTC-T--GAATTTCTTCACCTGAACAAC-- D_novemcinctus300279 ------------TTGAAAGAGATGGCAAGAATTCCAAAAATGGACCTC-T D_novemcinctus300283 ----------TTGCAATGATGT-----GAATCTCTCA--CTGAATCAA-- D_novemcinctus300284 ---------TTGCCAGTGATGGTTA-AGAATTTCTTCACCTGAA-CAA-- D_novemcinctus300334 -------TTGCCACAAATGCCTATATTAAAAAAACAAAGCAAAAAAAAAA D_melanogaster300127 TTGCCTGTAATGAGACCAAATTGGCCTGGTCGAATTCGAATGTGTCTGGG E_telfairi300083 ----------TTGCCATGATGA-----CAGTCATTCC--CTGAATTAA-- E_telfairi300084 ---------TTGCCGATGATGGTTA-AGAATTTCTTCACCTGAA-TAC-- E_caballus300265 ---------TTGGCGATGATGCAT---GAATTTCTTCACCTGGAATCA-- E_caballus300266 ----------TTGCGATGATGT-----GAGTTTTTCA--CTGAATTAAA- E_caballus300267 ---------TTGCCGGTGATGGTTG-CGAATTTCTTCACCTGAA-TAA-- E_europaeus300240 ---------ATGCCAATGATGGTTA-AGAATTTCTTCACCTGAA-TAA-- E_europaeus300529 ---------TTGCCAATGATGGTTA-AGAATTTCTTCACCTGAA-TAA-- E_europaeus300702 ---------TTGACAATGATGCAT---GAATTTCTTCATCTGCAACCA-- E_europaeus300703 ----------TTGCAATGATGT-----AAGTTCCTTT--CTGAATAAG-- E_europaeus300704 ---------TTGCCAATGATGGTTA-AGAATTTCTTCACCTGAA-TAA-- F_catus300237 ----------TGGCAGTGATGTAT---GAATTTCTTCACCTGGAAACA-- F_catus300238 ----------TTGCAATGATGT-----GGATTTCTCA--CTGAATTCA-- F_catus300239 ---------TTGCCGATGATGGTTA-CGAATTTCTTCACCTGAA-TAA-- F_catus300146 ---------------TTGCAATGAAGATATA--TTG-TATTGAATGATCT G_gallus300054 -------------------------------------------------- G_gallus300113 ---------------ATGTAAATGATG-AAA--CTAGCACTTTATTTCAA G_gallus300053 -------------------------------------------------- G_aculeatus300128 ----------ATGCAATGATGACAT--GAATTTCTTCAACTGACAACC-- G_aculeatus300129 ----------TAGCAATGATGTTT---GAATTTCTTCACCTGAA-TCA-- G_aculeatus300130 ----------ATGCAATGATGACAC--TAATTTCTTTAACTGAAACCC-- G_gorilla300977 ---------TTGCCAATGATGGTTA-AGAATTTCTTCACCTGAA-TAA-- G_gorilla300975 ----------TTGCAATGATGT-----GAATCTCTGA--CTGAATTCA-- G_gorilla300976 ----------TTGCAGTGATGTA----AAATTTCTTCACCTGAAATTA-- H_sapiens300581 ----------TTGCAGTGATGTA----AAATTTCTTGGCCTGAAATTA-- H_sapiens300582 ----------TTGCAATGATGT-----GAATCTCTCA--CTGAATTCA-- L_africana300451 ---------TTGCCAATGATGGTTA-AGAATTTCTTCACCTGAA-CAA-- L_africana300450 ---------TTGGCGATGATGATG---ATAATTTTTCACCTGAAGTGA-- M_mulatta300422 -----------AAGAGAAGTATGTTGGGGAGTTGCCCACTTTGAAATAAA M_mulatta300450 ---------TAGCCTACAATGAATT---GGTCTTTTC--TTAGATTAACA M_mulatta300458 ----------TTGTAATGATGT-----GAATCTCTCA--CTGAATTCA-- M_mulatta300459 ----------TTGTAATGATGT-----GAATCTCTCA--CTGAATTCA-- M_mulatta300672 ----------TTGCAATGATGT-----GAATCTCTCA--CTGAATTCA-- M_mulatta300673 ----------TTGCAGTGATGTA----GAATTTCTTCGCCTGAAATCA-- M_mulatta300671 ---------TTGCCAGTGATGGTTA-AGAATTTCTTCACCTGAA-TAA-- M_murinus300069 ---------TTGCCAATGATGGTTA-AGAATTTCTTCACCTGAA-TAA-- M_murinus300475 ----------------------TAGATTGTG--TTGATAATATAATTTCA M_murinus300068 ---------------ATGATGC-----GAATCTCTTA--CTGAACTAA-- M_domestica300125 ----------TTGCAATGATGTAT---GAATTTCTTCACCTGAAATAA-- M_domestica300126 ----------TTGCAATGATGTGT---GAATTTCTTCACCTGAATTAAT- M_musculus300969 ---------TTGCCAGTGATGCTTA-GGAATTTCTTCACCTGAA-TCA-- M_musculus300967 ----------GTGCAGTGATGTGT---GAATTTCTTCACCTGAAAATA-- M_musculus300968 ----------TTGCAATGATGT-----CAATCTTTGA--CTGAAGTGA-- M_lucifugus300770 ----------TTGCAATGATGT-----GAATTTCTTA--CTGAATTAA-- M_lucifugus300771 ---------TTGCCGATGATGGTGA-CGAATTTCTTCACCTGAA-TAA-- O_anatinus302278 ----------TAAAAGTGGTG--TA-TGAATTTCTTCACCAGAA-ATA-- O_anatinus302459 ----------TTGCAATGATGTAT---GAATTTCTTCACCTGAA---AA- O_sativa300106 ----------GCCAAATGATGCTAAAATATG--TTTTTGCTGAGTCTTTC O_sativa300108 ---------GAGCAGATGATGATATATTATG--TTTGTACTGATTTATT- O_sativa300239 ----------GCCAAATGATGCTAAAATATG--TTTTTGCTGAGTCTTTC O_sativa300240 ---------GAGCATGTGATGTTACAAGGAG--ATGCTACTGAGATGTTA O_latipes300058 ----------ATGCAATGATGTTCA--GAATTTCTTCACCTGAAACTT-- O_latipes300059 ----------TGGCAATGATGTCT---GAATTTCTTCACCTGAA-TCC-- O_garnettii300612 ----------CTGCAATGATGTAC---AAATGTCTTCACCTGAAATCA-- O_garnettii300613 ----------TTGCAATGGTGT-----AAATCTCTCA--CTGAATTAATT O_garnettii300614 ---------TTGCCAATGATGGTTA-AGAATTTCTTCACCTGAA-TAA-- P_troglodytes300578 ----------TTGCAGTGATGTA----AAATTTCTTCGCCTGAAATTA-- P_troglodytes300579 ----------TTGCAATGATGT-----GAATCTCTCA--CTGAATTCA-- P_troglodytes300580 ---------TTGCCAATGATGGTTA-AGAATTTCTTCACCTGAA-TAA-- P_patens300046 ---------------GTGTACATGATGCGAA--CCAACTATGTATCCTAT R_norvegicus300489 ----------GTGCAGAGATGTGT---GCGTTTCTTCACCTGAAGTCA-- R_norvegicus300935 ----------GTGCAATGATGTGT---GAATTTCTTCACCTGAAATCA-- R_norvegicus300936 ----------TTGCAATGATGT-----GAATCTTTTG--CTGAAGTGA-- R_norvegicus300937 ---------TTGCCAATGATGGTTA-AGAATTTCTTCACCTGAA-TCA-- S_araneus300514 ---------TTGCCCGTGATGGTTA-AGAATTTCTTCACCTGAA-TCG-- S_tridecemlineatus300257 ---------TTGCCTATGATGGTTA-AGAATTTCTTCACCTGAA-TGA-- S_tridecemlineatus300255 -------------GTGCTATGA---TGCATCAGTTTCACCCGAAATCA-- S_tridecemlineatus300256 ----------TTGCAATGATGC-----AAGCCTTTTG--CTGAATTAG-- T_nigroviridis300039 -----------TGCAATGATGT-TT--GAATTTCTTCACCTGAAGTCA-- T_nigroviridis300038 ----------------------ACT-TGAATTTCTTCACCTGATGGCT-- T_dicoccoides301105 ----------GTCAGATGATGCTAAAACAAG--ATATCCCTGAGATTTTC T_belangeri300417 ---------GTTGCGATGATGTAT---GAATTTCTTCACCTGAAAC---- T_belangeri300418 ----------TTGCGATGATGT-----GACTTTTCCA--CTGAAGTGA-- T_truncatus300557 ------------TGGCGATGATGCA-TGAACTTCTTCACCTGG-AATC-- T_truncatus300560 ----------TTGCAATGATGT-----GATACTCTCA--CTGAATTAA-- T_truncatus300561 ---------TTGCCGATGATGGTTA-TGAATTTCTTCACCTGAA-TAA-- X_tropicalis300136 ----------GTGCAATGATGTGCATAGAATTTCTTCACCTGAA-TGA-- X_tropicalis300137 ----------TCGCAATGATGTAAT-TGAATTTCTTCACCTGACTGGA-- X_tropicalis300138 ----------TTGCAGTGATGGCT---GAATTTCTTCACCTGAAACCA-- A_tauschii300450 T----TTGAGGAA--TA----CAAAATCAAGCTTTTTAAAACTGATGGTT C_elegans300038 --ACCCTGGGGGCGAAAT----------GAGCTTTTTAACTCAGATGCTT C_familiaris300094 ---CTGTGAAGCATAAAATC--------AAGCTTTTTAACCCTGAGTCAC C_familiaris300325 ---CTGTGAAGAGTAAAA--------TCGAGCTTTTTAACCCTGAGTCAC C_familiaris300326 --GCCATGTGG-TC----------------ATACTGT-ATCTGAGGCAAA C_porcellus300911 --GCCATGAGGTGTGAAT------CCATGAGCTTTTTAACCCTGAGCAGT C_porcellus300912 --GCCATGTGG-TC----------------ATGCTTT-ATCTGAGGCAAA D_rerio300114 ---AACTGAAGATCAAAA-----TA--CGAGCTTTTTAACCCTGAGCAAC D_rerio300115 --CATGTGGTT-TAAATG-----------AGCTTTTTAACCCTGAGCTAA D_novemcinctus300279 GAATAATAATGA----AA---AATGATAGAGCTTTTTAACATTGAAACAA D_novemcinctus300283 --ACCGTGAAGTGCAAAT------CTATGAGCTTTTTAACCCTGAGCAAT D_novemcinctus300284 --AACATGTGG-TC----------------ATGTTTT-ATCTGAGGCAAA D_novemcinctus300334 AAAAAGTGCAAATCTATGA-----------GCTTTTTAACCCTGAGCAAT D_melanogaster300127 CCCAGTTAAAAGGCAAATTACGCTAATGAAATGTTTTAACCCTGATGTG- E_telfairi300083 --CCCTTGAAGCACAAAC------ACATGAGCTTTTTACCCCTGAGCAGC E_telfairi300084 --ATCATGTGG-TC----------------GTGTTTT-TTCTGAGGCAAA E_caballus300265 ---CCGTGAAGAGTAAAAT-------CCGAGCTTTTTAACCCTGAGTCAT E_caballus300266 ---CCGTGAAGTGCAAAC------ACATGAGCTTTTTAACCCTGAGCAAT E_caballus300267 --ACCATGTGG-CC----------------ATTTTGT-ATCTGAGGCAAA E_europaeus300240 --GCCATGAGG-TCA----------------TATTCT-ATCTGAGGCAAA E_europaeus300529 --ACCATGTGG-TCA----------------TATTCT-ATCTGAGGCAAA E_europaeus300702 ---CTGTGGAGAGTGAAA--------CCGAGCTTTTTAACCCTGAGTCAC E_europaeus300703 --ACCTTGAAGTGCAAA-------ATATGAGCTTTTTAACCCTGAGCAAT E_europaeus300704 --ACCATGTGG-TCA----------------TATTCT-ATCTGAGGCAAA F_catus300237 ---CCGTGGAGAGCAGAAT-------CCGAGCTTTTTAACCCTGAGCCAC F_catus300238 --ACTTTGAAGTGCAAA-------ACATGAGCTTTTTAACCCTGAGCAGT F_catus300239 --GCCGTGTGG-TC----------------GTGTTGT-GTCTGAGGCAAA F_catus300146 GAGGATCTGTGAT--TGG---ATAATAAGAGCTTATTAAAACTGATGCCA G_gallus300054 -------------------------------------------------- G_gallus300113 GTCATTTTAAAAT---AG---TAAAATCTAGCTTTTTAAAACTTAGGCAC G_gallus300053 -------------------------------------------------- G_aculeatus300128 --T----GATG-CTTTTG-----------AGCTTTTTAACCCTGAGCATT G_aculeatus300129 --TCTGTGTGGATCAAC-------------CTTTTTAAATCCTGAGCAGA G_aculeatus300130 --T----GATG-CGTTTG-----------AGCTTTTTAACCCTGAGCATT G_gorilla300977 --ACCATGTGG-TCAG---------------CATTAC-ATCTGAGGCAAA G_gorilla300975 --ACCTTGAAGTGCGAAT------CCATGAGCTTTTTAACCCTGAGCAAT G_gorilla300976 ---TTGTGAAGAGTAAAA--------CCGAGCTTTTTAACACTGAGTCAA H_sapiens300581 ---CTGTGAAGAGTAAAA--------CCGAGCTTTTTAACACTGAGTCAG H_sapiens300582 --ACCTTGAAGTGCGAAT------CCATGAGCTTTTTAACCCTGAGCAA- L_africana300451 --ACCATGTGG-TC----------------AAGTTTT-ATCTGAGGCAAA L_africana300450 ---CCATGAGGGGTGAA---------TTGAGCTTTTTAACACTGAGTCAC M_mulatta300422 AATTGACAAAATCTCATGAC-------AGAGCTTTTTAACCCTGATTCTT M_mulatta300450 AGCTAGTGAAGTTTTAAA-------TACGAGCTTTTTAAAATAGAGTCTT M_mulatta300458 --ACCTTGAAGTGCAAAT------CCGTGAACTTTTTAACCCTGAGCAAT M_mulatta300459 --ACCTTGAAGTGCAAAT------CCGTGAACTTTTTAACCCTGAGCAAT M_mulatta300672 --ACCTTGAAGTGCAAAT------CCATGAGCTTTTTAACCCTGAGCAAT M_mulatta300673 ---CTGTGAAGAGTAAAA--------CCGAGCTTTTTAACACTGAGTCAA M_mulatta300671 --ACCATGTGG-TCG---------------ACATTGT-ATCTGAGGCAAA M_murinus300069 --ACCGTGTGG-TCA----------------CATTTT-ATCTGAGGCAAA M_murinus300475 GTGGATTTGCAGTGATGT---AAAATTTGAGCATTTTAACCCTCAGTCCA M_murinus300068 --ACCTTGAAGTGCAAAT------ACATGAGCTTTTTAACCCTGA----- M_domestica300125 --CTTGTGTAGAACAAAT------ACACGAGCTTTTTAACCCTGAGGCAT M_domestica300126 --AGCATGAAGAATAAAT------ACACGAGCTTTTTAACCCTGAGCAAA M_musculus300969 --ACTATGTGG-TCACA----------------CTGTTGTCTGAGGCAAA M_musculus300967 ---TTGTGAAGAGTAA---------ATCGAGCTTTTTAACCCTGAGTCGC M_musculus300968 ---CCTTGAAGTGCAATT------AC-TGAGCTTTTTAACCCTGAGCAAT M_lucifugus300770 --TCCTTGAAGTGCAAAT------ACATGAGCTTTTTAACCCTGAGCAAT M_lucifugus300771 --ACCATGTGG-TC----------------ATGTTGT-GTCTGAGGCAAA O_anatinus302278 --ACTGTGGTGATCAAACA----CATTAGATTTTTTTAACCTGAGCTAC- O_anatinus302459 --AGAATGAAGAGCAAAT------ACACGAGCTTTTTAACCCTGAGCAAA O_sativa300106 T----TTGAAGAC--TAA---CAAAATCGAGCTTTTTAAAACTGATGGTT O_sativa300108 ------TGATGTC--TA-----AAAATCGAGCTTTTTAAAACTGATGCTC O_sativa300239 T----TTGAAGAC--TAA---CAAAATCGAGCTTTTTAAAACTGATGGTT O_sativa300240 TATCGTTGAAGTC--TC----TAAAACCGAGCTTTTTAAAACTGATGCTT O_latipes300058 --TCTATGATGGTTTTTG-----------AGCTTTTTAACCCTGAGCATT O_latipes300059 --TCCGTGTGGATCCAAA-----CATACGAGCTTTTTAACCCTGAGCAGC O_garnettii300612 ---CTGTGGAGAGTAAAA--------TCGAGCTTTTTAACACTGAGTCAC O_garnettii300613 ACCCTGTGAAGTGCAAAT------ATGTGAGCTTTTAAACCCTGAACATC O_garnettii300614 --ACTATGTGG-TCA-----------------CTTCGTATCTGAGGCAAA P_troglodytes300578 ---CTGTGAAGAGTAAAA--------CCGAGCTTTTTAACACTGAGTCAA P_troglodytes300579 --ACCTTGAAGTGCGAAT------CCATGAGCTTTTTAACCCTGAGCAAT P_troglodytes300580 --ACCATGTGG-TCAG---------------CATTGC-ATCTGAGGCAAA P_patens300046 GCACAGTGAGGAT---TA---AACAAACGAGCTTTTTAAATCTGATGCAT R_norvegicus300489 ---CTGTAGAGTG-AA---------ACCGAGCTTTTTGACCCTAAGTCAC R_norvegicus300935 ---CCGTGAAGAGTAATTTA-AGTAATCGAGCTTTTTAACCCTGAGTCAC R_norvegicus300936 ---CCTTGAAGTGTAATT------CC-TGAGCTTTTTAACCCTGAGCAAT R_norvegicus300937 --ACTATGTGG-TCATA-------------CTCTTCTTGTCTGAGGCAAA S_araneus300514 --TCTATGTGG-TCAGA----------------GTATGG-CTGAGGCAAA S_tridecemlineatus300257 --ATCATGTGG-TC----------------ATGTTAT-ATCTGAGGCAAA S_tridecemlineatus300255 ---CTGTGAGGGTTGAAATC-C------GAGCTTTTTAACACTGAGTCAC S_tridecemlineatus300256 --ACCTTGAAGTGCATATA----TACTTGAGCTTTTTAACTCTGAGCAAT T_nigroviridis300039 ---CTGTGTAGATCAAAA-----CAGACGAGCTTTTTAACCCTGAGC--- T_nigroviridis300038 --TCAGTGATGCGTA-----------TTGAGCTTTTTAACCCTGAGC--- T_dicoccoides301105 T----TTGAGGAA--TA----CAAAATCGAGTTTTTTAAAACTGATGGTT T_belangeri300417 ---CAGTGAAGAGTAAAAA------TCCGAGCTTTTTAACACTGAGTCAC T_belangeri300418 ---CCTTGAAGTGCAGAT------CCATGAGCTTTTTAACCCTGAGCAGT T_truncatus300557 --GCTGTGAAGAGTAAAA-------TTCGAGCTTTTTAACCCTGAGTCAT T_truncatus300560 --ACCTTGAAGTACAAGT------GTAGGAGCTTTTTAACCCTGAGCAAT T_truncatus300561 --ACCATGTTG-TC----------------ATGTTGTCATCTGAGGCAGA X_tropicalis300136 ---CCGTGTGGCACTCA-----------GAGCTTTTTAACCCTGAGCGGC X_tropicalis300137 --T-AATGAAGATTAAA--------TCCGAGCTTTTTAACCCTGAGCTGT X_tropicalis300138 --CTTGTGTGGATGTAAA-----AACACGAGCTTTTTAACACTGAGCAGT A_tauschii300450 - C_elegans300038 - C_familiaris300094 A C_familiaris300325 A C_familiaris300326 - C_porcellus300911 - C_porcellus300912 - D_rerio300114 - D_rerio300115 - D_novemcinctus300279 A D_novemcinctus300283 - D_novemcinctus300284 - D_novemcinctus300334 - D_melanogaster300127 - E_telfairi300083 - E_telfairi300084 - E_caballus300265 A E_caballus300266 - E_caballus300267 - E_europaeus300240 - E_europaeus300529 - E_europaeus300702 A E_europaeus300703 - E_europaeus300704 - F_catus300237 - F_catus300238 - F_catus300239 - F_catus300146 G G_gallus300054 - G_gallus300113 G G_gallus300053 - G_aculeatus300128 - G_aculeatus300129 - G_aculeatus300130 - G_gorilla300977 - G_gorilla300975 - G_gorilla300976 C H_sapiens300581 - H_sapiens300582 - L_africana300451 - L_africana300450 A M_mulatta300422 T M_mulatta300450 G M_mulatta300458 - M_mulatta300459 - M_mulatta300672 - M_mulatta300673 - M_mulatta300671 - M_murinus300069 - M_murinus300475 G M_murinus300068 - M_domestica300125 A M_domestica300126 - M_musculus300969 - M_musculus300967 A M_musculus300968 - M_lucifugus300770 - M_lucifugus300771 - O_anatinus302278 - O_anatinus302459 - O_sativa300106 - O_sativa300108 A O_sativa300239 - O_sativa300240 G O_latipes300058 - O_latipes300059 - O_garnettii300612 - O_garnettii300613 - O_garnettii300614 - P_troglodytes300578 - P_troglodytes300579 - P_troglodytes300580 - P_patens300046 C R_norvegicus300489 A R_norvegicus300935 A R_norvegicus300936 - R_norvegicus300937 - S_araneus300514 - S_tridecemlineatus300257 - S_tridecemlineatus300255 A S_tridecemlineatus300256 - T_nigroviridis300039 - T_nigroviridis300038 - T_dicoccoides301105 - T_belangeri300417 A T_belangeri300418 - T_truncatus300557 - T_truncatus300560 - T_truncatus300561 - X_tropicalis300136 - X_tropicalis300137 - X_tropicalis300138 -