Family: SNORD25

CLUSTAL W (1.83) multiple sequence alignment A_tauschii300011 --------GGCAACAGTGAT-GAGTT---------CTTACAGACCTGTAA A_tauschii300012 --------CGTGACGGTGAT-GAGCC---------TTTACAGACCTGTAA A_tauschii300013 ------AATGACTCAATGA--GAGTT---------TTAGCAGACTTGTAA A_tauschii300018 --------GGCAACAGTGAC-GAGTT---------CTTACAGACCTATAA A_tauschii300019 ---------GCGAAGGTGAT-GAACC---------TTTGCAGACCTGTAA A_tauschii300020 --------TCATGAAACGAT-GAGTT---------CTAGCAGACCAGTAA A_tauschii300032 --------GACAACCGTGAT-GAGCCAATTTTACAGTTACCGACCTGTAA A_tauschii300391 --------GACAACTGTGAT-GAGCCCATTTTACAGTTACAGACCTGTAA A_tauschii300374 --------GACAACTGTGAT-GAGCCAATTTTACAGTTACAGACCTGTAA A_tauschii300132 --------GACAGCTGTGAT-GAGCCCATTTTACAGTTACAGACCTGTAA A_tauschii300226 --------GACAACCGTGAT-GAGCCAATTTTACAGTTACAGACCTGTAA A_tauschii300400 --------GACAACCGTGAT-GAGCCAATTTTACAGTTACAGACCTGTAA A_tauschii300492 --------GACAACTGTGAT-GAGCCAATTTTGCAGTTACAGACCTGTAA A_thaliana300032 -----------AACAGTGAT-GAGTCAG-------TTTACAGACCTGTAA A_thaliana300033 -----------AACAGTGAT-GAGTCAG-------TTTACAGACCTGTAA C_elegans300120 ------------TGGGCGGTGAAATTG-------TTGCACAGACCTGTTC C_familiaris300100 ---------CTCTCTGTGATGAGAACC------TT-TCACAGACCTGTAC D_novemcinctus300099 ---------CTCCCTATGATGAGGACC------TTTTCACAGACCTGTAC D_melanogaster300048 ----------CTTCTCTGATGATCT--------TTTACACAGACCTGTAC E_europaeus300186 --------ATTCTCTGTGATGAGAATC------TTATCATAGACTTGTAT E_europaeus300242 --------GTTCTCTGTGATGAGAATC------TTATCATAGACCTGTAC E_europaeus300418 --------TCTCTCAGTGATGAGGATC------TTATCACAGACCTGTAC F_catus300032 ---------CTCTCTGTGATGAGAACC------TTTTCACAGACCTGTAC G_gorilla301037 ---------CTTCCTATGATGAGGACC------TTTTCACAGACCTGTAC H_sapiens300169 ----------TTCCTATGATGAGGACC------TTTTCACAGACCTGTAC M_mulatta300220 ---------CTCCCTATGATGAGGACC------TTTTCACAGACCTGTAC M_murinus300395 ---------CCTCCTATGATGAGGACC------TTGTCACAGACCTGTAC M_musculus300709 --------ACCCCCTATGATGAGGACC------TTTTCACAGACCTGTAC O_sativa300116 --------GGCAACAGTGAT-GAGTC---------CTTACAGACCTGTAA O_sativa300117 --------TGTGGCAGTGAT-GAGCC---------CTAACAGACCTGTAA O_sativa300118 --------TTTGACGGTGAT-TAGCC---------CTAACAGACCTGTAA O_sativa300119 --------CATGGCGGTCTT-GAGCC---------CTAACAGACCTGAAA O_sativa300003 --------AGCAACGGTGAT-GAGTCC----------TACAGACCTGTAA O_garnettii300570 --------TCTGGCTATGATGAGGACT------TTTTCACAGACCTGTAC P_troglodytes300396 --------GTTCCCTATGGTGAGGACA------TTTTCACAGGCTTGCAC P_troglodytes300463 ---------CTTCCTATGATGAGGACC------TTTTCACAGACCTGTAC P_pygmaeus300536 ---------CTTCCTATGATGAGGACC------TTTTCACAGACCTGTAC R_norvegicus300380 --------ATGCCCTATGATGAGGACC------TTTTCACAGACCTGTAC S_cerevisiae300046 -------TTAACATGATGAAAAAATAT-----ATTAACACAGACCTGTAC S_araneus300242 --------CTTCCCCGTGATGAGACG------GTTTTCACAGACCTGTAC S_tridecemlineatus300198 ---------CTCCCAGTGATGAGGACA------TTTTCACAGACCTGTAC T_nigroviridis300123 -----------CTCGATGATGATA--------ATTCTCACAGACCTGTAC T_aestivum300103 --------GGCAACAGTGAT-GAGTT---------CTTACAGACCTGTAA T_aestivum300104 --------CGTGACGGTGAT-GAGCC---------TTTACAGACCTGTAA T_aestivum300105 --------GGCAACAGTGAC-GAGTT---------CTTACAGACCTATAA T_aestivum300106 ---------GCGAAGGTGAT-GAACC---------TTTGCAGACCTGTAA T_aestivum300107 --------TCATGAAACGAT-GAGTT---------CTAGCAGACCAGTAA T_aestivum300395 --------GACAACCGTGAT-GAGCCAATATTACAGTTACAGACCTGTAA T_aestivum300012 --------GACAACTGTGAT-GAGCCCATTTTACAGTTACAGACCTGTAA T_aestivum300013 --------GACAACTGTGAT-GAGCCAATTTTACAGTTACAGACCTGTAA T_aestivum301270 ------AATGACTCAATGA--GAGTT---------TTAGCAGACTTGTAA T_aestivum300015 --------GACAACCGTGAT-GAGCCAATTTTACAGTTACAGACCTGTAA T_dicoccoides300290 --------GACAACCGTGAT-GAGCCAATTTTACAGTTACAGACCTGTAA T_dicoccoides300136 --------GGCAACAGTGAT-GAGTT---------CTTACAGACCTGTAA T_dicoccoides300137 --------GGCAACAGTGAC-GAGTT---------CTTACAGACCTGTAA T_dicoccoides300138 --------GTTGACGGTGAT-GAGCC---------TTTACAGACCTGTAC T_dicoccoides300139 --------CGTGACGGTGAT-GAGCC---------TTTACAGACCTGTAA T_dicoccoides300140 --------GGTAACAGTGATTGAGTT---------CTTAAAAACCCGTAA T_dicoccoides300141 -----GTCCGCGAAGGTGAT-GAGCC---------TTTGCAGACCTGTAA T_dicoccoides300289 --------GACAACCGTGAT-GAGCCCATTTTACAGTTACAGACCTGTAA T_dicoccoides300147 -----------AACGATGAT-GTGTT---------TTAGCAGACTTGTAA T_dicoccoides300228 --------GACAACTGTGAT-GAGCCAATTTTACAGTTACAGACCTGTAA T_dicoccoides300232 --------GACAACCGTGAT-GAGCCAATTTTACAGTTACAGACCTGTAA T_dicoccoides300234 --------GACAACCGTGAT-GAGCCCATTTTACAGTTACAGACCTATAA T_dicoccoides300288 --------GACAACTGTGAT-GAGCCAATTTTACAGTTACAGACCTGTAA T_dicoccoides300098 --------GACAACCGTGAT-GAGCCAATTTTACAGTTACAGACCTGTAA T_dicoccoides301047 ------AATGACTCAATGA--GAGTT---------TTAGCAGACATGTAA T_dicoccoides301050 GGCAACAATGACTCAATGA--GAGTA---------TTAGCAGACTTGTAA * A_tauschii300011 TGATTC--TTGCGGAAATGATCGCACAGTTCAGAGAACATCTAAGGGACT A_tauschii300012 TGATTC--TTGCGAGCATGATCGCTTGATTCAAAGAACATCTAAGGGACT A_tauschii300013 TTATTC--TTGCGGGAATAATCGGAAGATTCAAATCACATCCAAGGGATT A_tauschii300018 TGATTC--TTGCGGAAATGATTGCACAGTTCAAAGAACATCTAAGGGACT A_tauschii300019 TGATTC--TTGCGAGCATGATCGCTTGATTCAAAGAACATCTAAGGGACC A_tauschii300020 TGATTC--TTGCAGGAATGATCGCACGATTCAAAGAACATCTAAGGGACT A_tauschii300032 TGACTC--GTGCAGAAATAATCGCATGGT-CAAAGAACATCTAAGGGACT A_tauschii300391 TGACTC--CTGTGGAAATGATCGCATGGT-CAAAGAACATCTAAGGGACT A_tauschii300374 TGACTC--CTGCGGAAATGATCGCATGGT-CAAAGAACATCTAAGGGACT A_tauschii300132 TGACTC--CTGTGGAAATGATCGCATGGT-CAAAGAACATCTAAGGGACT A_tauschii300226 TGACTC--CTGCGGAAATGATCGCATGGT-CAAAGAACATCTAAGGGACT A_tauschii300400 TGACTC--CTGTGGAAATGATCGCATGGT-CAAAGAACATCTAAGGGACT A_tauschii300492 TGACTC--CTGCGGAAATGATCGCATGGT-CAAAGAACATCTAAGGGACT A_thaliana300032 TGATT-----GCGGTAATGATCGCATTATT--ATGAACATCTAAGGGACT A_thaliana300033 TGATT-----GCGGTAATGATCGCATTATT--ATGAACATCTAAGGGACT C_elegans300120 CTATTAGTTCACTGAGGAAAATAGCAATCATGAGCCT------------- C_familiaris300100 TGATCT--CCGTGAGGATAAAAAAAACTCTGAGGAG-------------- D_novemcinctus300099 TGAGCC--CCGTGAGGATAAGTAA--CTCTGAGGAGAC------------ D_melanogaster300048 TGAGCT--CATAACCGTGCAGAAAATTGT--AAACTGAAA---------- E_europaeus300186 CGAGAT--CCATGAGGATAAAACA--CTCTGAGGAGAC------------ E_europaeus300242 CGAGAT--CCATGAGGATAAGACA--CTCTGAGGAAAA------------ E_europaeus300418 CGAGAT--CCATGAGGATAAGACA--CTCTGAGGAGAC------------ F_catus300032 TGAGCT--CCGTGAGGATAAGACA--CTCTGAAGAGAC------------ G_gorilla301037 TGAGCT--CCGTGAGGATAAGTAA--CTCTGAGGAGAT------------ H_sapiens300169 TGAGCT--CCGTGAGGATAAATAA--CTCTGAGGAGA------------- M_mulatta300220 TGAGCT--CCGTGAGGATAAGTGA--CTCTGAGGAGAT------------ M_murinus300395 TGAGTT--CCGTGAGGATAAGTAA--CTCTGAGGAGAC------------ M_musculus300709 TGATATATCTGTGAGGATAAGTAA--CTCTGAGGAGGC------------ O_sativa300116 TGATTC--TTGCGGGAATGATCGCTTGATTCAAAGAACATCTAAGGGACT O_sativa300117 TGATTC--TTGTGTATATGATCGCTTGATTCAAAGAACATCTAAGGGACT O_sativa300118 TGATTC--TTGCGGATACGATCGCTTGAT-CAAAGAACATCTAAGGGACT O_sativa300119 TAATTA--TTGCGGATATGATTGCTTAATTCAGAGCACATCTAAGGGACT O_sativa300003 TGACTC--CTGCGGAGATGATCGCATGGT-CAAAGAACATCTAAGGGACT O_garnettii300570 TGATCT--CCATGAGGATAAGTAA--CTCTGAGGAGAC------------ P_troglodytes300396 TGAGCT--CTATGAGCATAAGTAA--TTCTGAGGAAAT------------ P_troglodytes300463 TGAGCT--CCGTGAGGATAAGTAA--CTCTGAGGAGAT------------ P_pygmaeus300536 TGAGCT--CCGTGAGGATAAGTAC--CTCTGAGGAGAT------------ R_norvegicus300380 TGATCT--CTGTGAGGATAAGTAA--CTCTGAGGAGGC------------ S_cerevisiae300046 TGAACT--TTTCGAAGTTTTGCAGATAAC--AATATTGCTTTTTTTCTCT S_araneus300242 TGAGTT--CCGTGAGGAT----GGAAAGCTCTGAGGAGAT---------- S_tridecemlineatus300198 TGAACT--CCGTGAGGATAAGTAA--CTCTGAGGAGAC------------ T_nigroviridis300123 TGAAAA--CTGTGA----TTGCAACTATT--AAATCTGATG--------- T_aestivum300103 TGATTC--TTGCGGAAATGATCGCACAGTTCAGAGAACATCTAAGGGACT T_aestivum300104 TGATTC--TTGCGAGCATGATCGCTTGATTCAAAGAACATCTAAGGGACT T_aestivum300105 TGATTC--TTGCGGAAATGATTGCACAGTTCAAAGAACATCTAAGGGACT T_aestivum300106 TGATTC--TTGCGAGCATGATCGCTTGATTCAAAGAACATCTAAGGGACC T_aestivum300107 TGATTC--TTGCAGGAATGATCGCACGATTCAAAGAACATCTAAGGGACT T_aestivum300395 TGACTC--CTGCGGAAATGATCGCATGGT-CAAAGAACATCTAAGGGACT T_aestivum300012 TGACTC--CTGTGGAAATGATCGCATGGT-CAAAGAACATCTAAGGGACT T_aestivum300013 TGACTC--CTGCGGAAATGATCGCATGGT-CAAAGAACATCTAAGGGACT T_aestivum301270 TTATTC--TTGCGGGAATAATCGGAAGATTCAAATCACATCCAAGGGATT T_aestivum300015 TGACTC--CTGTGGAAATGATCGCATGGT-CAAAGAACATCTAAGGGACT T_dicoccoides300290 TGACTC--CTGTGGAAATGATCGCATGGT-CAAAGAACATCTAAGGGACT T_dicoccoides300136 TGATTC--TTGCGGAAATGATCGCACAGTTCAAAGAACATCTAAGGGACT T_dicoccoides300137 TGATTC--TTGCGGAAATGATCGCACAATTCAAAGAACATTTAAGGGACT T_dicoccoides300138 TGATTC--TTGCGAGCATGATCGCTTGATTCAAAGACCATCTAAGGGACT T_dicoccoides300139 TGGTTC--TGGCGAGCATGATCGCTTGATTCAAAGAACATGTAAGGGACT T_dicoccoides300140 TGATTC--TTGCGGAAATGATCGCACAGTTCAAAGAACATCTAAGGGACT T_dicoccoides300141 TGCTTC--TTGCGAGCATGATCGCTTGATTCAAAGAACATCTAAGGGACC T_dicoccoides300289 TGACTC--CTGCGGAAATGATCGCATGGT-CAAAGAACATCTAAGGGGCT T_dicoccoides300147 TGATTC--TTGCGGGAGTGATCACACTATTCGAAGAACACCTGATGGACT T_dicoccoides300228 TGACTC--CTGCGGAAATGATCGCATGGT-CAAAGAACATCTAAGGGACT T_dicoccoides300232 TGACTC--CTGTGGAAATGATCGCATGGT-CAAAGAACATCTAAGGGACT T_dicoccoides300234 TGACTC--CTGTGGAAATGATCGCATGGT-CAAAGAACATCCAAGGGACT T_dicoccoides300288 TGACTC--CTGCGGAAATGATCGCATGGT-CAAAGAACATCTAAGGGACT T_dicoccoides300098 TGACTC--CTGCGGTAATGATCGCATGGC-AAAAGAACATCTAAGGGACT T_dicoccoides301047 TTATTC--TTGTGGGAATAATTGGAAGATTCAAATCACATCCAAGGGATT T_dicoccoides301050 TTATTC--TTACGGGAATAATCAGAAGATTCAAATCACATCCAAGGGATT A_tauschii300011 GAGTTGTT- A_tauschii300012 GAGTCCTT- A_tauschii300013 GAGTTATA- A_tauschii300018 GAGTTGTT- A_tauschii300019 GAGTCGGC- A_tauschii300020 GAGT-GTGC A_tauschii300032 TATTTGTC- A_tauschii300391 GAGTTGTC- A_tauschii300374 GAGTTGTC- A_tauschii300132 GAGTTGTT- A_tauschii300226 GAGTTGTC- A_tauschii300400 GAGTTGTC- A_tauschii300492 GAGTTGTC- A_thaliana300032 GAGT----- A_thaliana300033 GAGT----- C_elegans300120 --------- C_familiaris300100 --------- D_novemcinctus300099 --------- D_melanogaster300048 --------- E_europaeus300186 --------- E_europaeus300242 --------- E_europaeus300418 --------- F_catus300032 --------- G_gorilla301037 --------- H_sapiens300169 --------- M_mulatta300220 --------- M_murinus300395 --------- M_musculus300709 --------- O_sativa300116 GAGTTATC- O_sativa300117 GAGTTGTC- O_sativa300118 GAGTAATA- O_sativa300119 GAGTTGCC- O_sativa300003 GAGTTGTC- O_garnettii300570 --------- P_troglodytes300396 --------- P_troglodytes300463 --------- P_pygmaeus300536 --------- R_norvegicus300380 --------- S_cerevisiae300046 GACT----- S_araneus300242 --------- S_tridecemlineatus300198 --------- T_nigroviridis300123 --------- T_aestivum300103 GAGTTGTT- T_aestivum300104 GAGTCCTT- T_aestivum300105 GAGTTGTT- T_aestivum300106 GAGTCGGC- T_aestivum300107 GAGT-GTGC T_aestivum300395 GAGTTGTC- T_aestivum300012 GAGTTGTC- T_aestivum300013 GAGTTGTC- T_aestivum301270 GAGTTATA- T_aestivum300015 GAGTTGTC- T_dicoccoides300290 GAGTTGTC- T_dicoccoides300136 GAGTTGTT- T_dicoccoides300137 GAGTTGTT- T_dicoccoides300138 GAGTCGTT- T_dicoccoides300139 GAGTCGTT- T_dicoccoides300140 GAGTTGTT- T_dicoccoides300141 GGGTGGGC- T_dicoccoides300289 GAGTTGTC- T_dicoccoides300147 GAGT-GTAC T_dicoccoides300228 GAGTTGTC- T_dicoccoides300232 GAGTTGTC- T_dicoccoides300234 GAGTTGTC- T_dicoccoides300288 GAGTTGTC- T_dicoccoides300098 GAGTTGTC- T_dicoccoides301047 GAGTTATA- T_dicoccoides301050 GAGTTGTA-