Family: SNORD111

CLUSTAL W (1.83) multiple sequence alignment C_familiaris300344 --TAGCCTGAAGTGATGATTCACAT-------TCATGTCTCTTCTCTGA- C_porcellus300869 --CAGCCTGAAGTGATGATTCACAT-------TCATGTCTCTTCTCTGA- C_porcellus300870 --TAGCCTGAAATGATGCC----TA---AATTTCATGTCTCTTCTCTGA- C_intestinalis300003 --TCGATCACAATGATGAAACAT-T-------TCATGTCTCTTCTCTGA- C_intestinalis300004 --TCGATCACAATGATGAAACAT-T-------TCATGTCTCTTCTCTGA- C_intestinalis300005 --TTGATCACAATGATGAAACAT-T-------TCATGTCTCTTCTCTGA- C_savignyi300017 --GTGATTACAATGATGATTTTA-C-------ACATGTCTCTTCTCTGA- D_rerio300137 --CTGTCA-AAATGATGAATATC-T-------TCATGTCTCTTCTCTGA- D_rerio300138 ----TAATGAAATGATGAGCTTT---------TCATGTCTCTTCTCTGA- D_rerio300139 --GTGCCAGAAATGATGATTATC-T-------TCATGTCTCTTCTCTGA- D_rerio300140 --GTGCCAGAAATGATGAATATC-T-------TCATGTCTCTTCTCTGA- D_novemcinctus300570 --CAGCCTGAAGTGATGATTCACAT-------TCATGTCTCTTCTCTGA- E_telfairi300427 --CCGCCTGAAATGATGATTCTTCA---AATTTCATGTCTCTTCTCTGA- E_telfairi300807 --CGGCCTGAAGTGATGATTAACAT-------TCATGTCTCTTCTCTGA- E_telfairi300808 --TAGCCTGAAATGATGATTCTTCA---AATTTCATGTCTCTTCTCTGA- E_caballus300251 --CAGCCTGAAATGATGATTCTTTA---CTTTTCATGTCTCTTCTCTGA- E_caballus300252 --TGGCCTGAAGTGATGATTCAGGT-------TCATGTCTCTTCTCTGA- E_europaeus300621 --CAGCCTGAAGTGATGATTTATAT-------TCATGTCTCTTCTCTGA- E_europaeus300622 --CAGCCTGAAATGATGATTCTTTA---AATTTCATGTCTCTTCTCTGA- G_gorilla300247 --CAGCCTGAAATGATGACTCTTTAAAAAATTTCATGTCTCTTCTCTGA- G_gorilla300248 --CAGCCTGAAGTGATGATTCACAT-------TCATGTCTCTTCTCTGA- H_sapiens300592 --CAGCCTGAAGTGATGATTCACAT-------TCATGTCTCTTCTCTGA- H_sapiens300593 --CAGCCTGAAATGATGACTCTTTAAAAAATTTCATGTCTCTTCTCTGA- L_africana300462 --CAGCCTGAAGTGATGACTCACAT-------TCATGTCTCTTCTCTGA- L_africana300463 --CAGCCTGAAATGATGATTCTTTA---AATTTCATGTCTCTTCTCTGA- M_mulatta300617 --CAGCCTGAAATGATGACTCTTTA---AATTTCATGTCTCTTCTCAGA- M_mulatta300618 --CAGCCTGAAGTGATGATTCACAT-------TCATGTCTCTTCTCTGA- M_murinus300459 --AAGCCT-AAGTGATGATTCACAT-------TCATGTCTCTTCTCTGA- M_murinus300460 --CAGCCTGAAATGATGACTCTCTTA--AATTTCATGTCTCTTCTCCGA- M_domestica300136 --CAGCCTGAAATGATGATTCACAT-------TCATGTCTCTTCTCTGA- M_domestica300137 --TTGCCTGAAATGATGATTATT---------TCATGAATCTTCTCTGAA M_musculus300813 --CAGCCTGAAATGATGACCATTTA---A--TTCATGTCTCTTCTCTGA- M_musculus300814 --CAGCCTGAAGTGATGATTCACAA-------TCATGTCTCTTCTCTGA- M_lucifugus300655 --CAGCCTGAAGTGATGATTCACAT-------TCATGTCTCTTCTCTGA- O_anatinus302228 --CTGCCTGAAATGATGAGTTCACT-------TCATGTCTCTTCTCTGA- O_anatinus302229 CAGCCTAAGTGATAATGATTCTT-C-------CTGTCTCTTCTCTGAGA- O_anatinus303360 --AGGCCTGGAATGATGATCCAGAT-------TCATGTCTCTTCTCTGA- O_anatinus303735 CAGCCTAAGAGATAATGATTCTT-C-------CTGTCTCTTCTCTGAGA- O_anatinus302226 --AGGCCTGGAATGATGATCCAGAT-------TCATGTCTCTTCTCTGA- O_anatinus302227 --TTGCCTGAAATGATGACTATT---------TCATGTCTCTTCTGAGA- O_cuniculus300493 --TAGTCTGAAGTGATGATTCACAT-------TCATGTCTCTTCTCTGA- O_cuniculus300494 --AAGGCTGAAATGATGACAATGTA---AATTTCATGTCTCTTCTCTGA- O_latipes300071 -----TTGAGTGTGATGAATTTT---------CCATGTCTCTTCTCTGA- O_latipes300075 --GCTGCAGAAGTGATGAGCTCT---------TCATGTCTCTTCTCTGA- O_latipes300076 --TCTGCAGAAATTATGAGTTTT---------TCATGTCTCTTCTCTGA- O_garnettii300500 ----AACTGAAATGATGAGTCACAT-------TCATGTCTCTTCTCTGA- O_garnettii300707 --CAGCCTGAAATGATGAGTCACAT-------TCATGTCTCTTCTCTGA- P_troglodytes300690 --CAGCCTGAAGTGATGATTCACAT-------TCATGTCTCTTCTCTGA- P_troglodytes300691 --CAGCCTGAAATGATGACTCTTTAAAAAATTTCATGTCTCTTCTCTGA- P_pygmaeus300193 --TTTCCAGAATTATGGGTTTGACAA----ACCAAAACACTCATT---A- P_pygmaeus300301 --TTTCCAGAATTATGGGTTTGACAA----ACCAAAACGCTCATT---A- P_pygmaeus300753 --CAGCCTGAAATGATGACTCTTTA---AATTTCATGTCTCTTCTCTGA- P_pygmaeus300754 --CAGCCTGAAGTGATGATTCACAT-------TCATGTCTCTTCTCTGA- R_norvegicus300598 --GGTCCTGAAGTGATGACTCA----------CAATGTTTCTTCTCTGA- R_norvegicus300981 --CAGCCTGAAATGATGACTATTTA---A--TTCGTGTCTCTTCTCTGA- S_araneus300095 -TAGCAAAAAGATGTTTATTTTA-T-------TCATGTCTCTTCTCT--- S_araneus300955 --GGGCCTGAAGTGATGATTCACAT-------TCATGTCTCTTCTCTGA- S_araneus300956 --CAGCCTGACAGGATGATCATTTA---AATTTCATGTCTCTTCTCTGA- S_tridecemlineatus300007 --GTGCCAGAAATGATGATTTTAGAT----TTTAACGAATTAATTTTGA- S_tridecemlineatus300335 --CAGC-TGAAGTGATGAT-CACAT--------CATGTCTCTTCTCTGA- T_nigroviridis300060 GTGCTGTAAAGCTGATGAGTTT----------TCATGTCTCTTCTCTGA- T_nigroviridis300061 -TGCTGTGGACGTGATGAGCTCC---------TCATGTCTCTTCTCTGA- T_nigroviridis300169 ----TTGAAAAGTGATGAGTTTG-T-------TCATGTCTCTTCTCTGA- T_truncatus300494 --CAGCCTGAAATGATGATTCTTTA---AATTTCATGTCTCTTCTCTGA- T_truncatus300495 --CAGCCCGAAGTGATGATTCACAT-------TCATGTCTCTTCTCTGA- * C_familiaris300344 ---TAAATC-TTTTGAAGGAAATTCT-GTGT-----ATCTGATCAGGCCT C_porcellus300869 ---TAAAT---TTTGAAGAAAATTCT-GTGT-----GTCTGATCAGGCTT C_porcellus300870 ---CAATTTTGTCTGGAGATGGTTTTTGCCTTATTGATCTGATCAGGCTG C_intestinalis300003 ---TTAAGA-ATGAAAG---ATATTTTTAT-TAT---TCTGAGTGATCAA C_intestinalis300004 ---TTAAGA-ATGAAAG---ATATTTTTAT-TAT---TCTGAGTGATCAA C_intestinalis300005 ---TAAAGA-ATGAAAG---ATATTTTTAT-TAT---TCTGAGTGATCTA C_savignyi300017 ---TTAAAA-ATGAAACGATACATTTTTATACTT---TCTGAGTAATCAC D_rerio300137 ---CTGT----TTGGTGGAGAGA-TTGTCTTGAT--ATCTGATTTTCATG D_rerio300138 ---CT-----ATTTGACTGGAGACGCATAAAGAC--CTCTGATCATAATA D_rerio300139 ---CTGT----TTGGTGAAGAGA-GATTTGTGAT--ATCTGATCTTCATG D_rerio300140 ---TTGT----TTAGTGAAGAGA-GATTTGTGAT--ATCTGATCTTCATG D_novemcinctus300570 ---TAAATC-TCTTGAAGACAGTTCT-GTGT-----ATCTGATCAGGCCT E_telfairi300427 ---TATGTTTCTCTGAAGATACATTTCGCCATACTGATCTGATCAGGCTA E_telfairi300807 ---TAAATG-TCTTGAAGATAATGTT-GTG------ATCTGACCAGGCCT E_telfairi300808 ---CATGTTTCTCTGGAGATAATTCTTGCCTTACTGATCTGATCAGGCTG E_caballus300251 ---CGTTTTTCTCTGGAGATAGTTCTTGCCTTAC-AATCTGATCAGGCTG E_caballus300252 ---TAAAC--CTCTTGAAGAAAATCT-GTGT-----ATCTGATCAGGCCT E_europaeus300621 ---TAAATC-TCTTGAAGAAACTTCT-GTGT-----ATCTGATCAGGCCT E_europaeus300622 ---CATT--TCTCTGGAGATAGTTTTTGCCTTACTGTTCTGATCAGGCTG G_gorilla300247 ---CATTTTTCTCTGGAGACAGTTTTTGCCTTATGAATCTGATCAGGCTG G_gorilla300248 ---TAAAT--TCTTGAAGAAAATTTTTGTGT-----GTCTGATCAGGCCT H_sapiens300592 ---TAAAT--TCTTGAAGAAAATTTTTGTGT-----GTCTGATCAGGCCT H_sapiens300593 ---CATTTTTCTCTGGACACAGTTTTTGCCTTATGAATCTGATCAGGCTG L_africana300462 ---TGGATG-TCTTGAAGAAATTTTT-GTGT-----ATCTGACCAGGACT L_africana300463 ---CATGTTTCTCTGGAGATACTGCTTGCCTTACTGATCTGATCAGGCTG M_mulatta300617 ---CATTTTTCTCTGGAGATAATTTTTGCCTTATGGATCTGATCAGGCTG M_mulatta300618 ---TAAAT--TTTTGAAGACAATTTT-GTGT-----ATCTGATCAGGCCT M_murinus300459 ---TATAT--TCTTGAAGAAAATTCG-GTGT-----ATCTGATC-GGCCT M_murinus300460 ---CATTTTTCTGTGGAGATAGCTTTTGCCTTATTGATCTGATCAGGCTA M_domestica300136 ---GATTTC-TTCTGGAGAAAATATG-GTGT-----AACTGATCAGGCTT M_domestica300137 ACTTTTTTCTCTGAAGACAAAAACTTACCTCTCTGAATCTGATCGGGCAC M_musculus300813 ---CATTCTCCTCTGGAGATGATTTTTGCCTTATTGATCTGATCAGGCTG M_musculus300814 ---AGAAT--TCATGGAGA---TTCT-GTGT-----ATCTGATCAGGCCT M_lucifugus300655 ---CAAATC-TCTTGAAGACAATTCT-GTGT-----ATCTGATCAGGCCT O_anatinus302228 ---AATCTT-CCCTGGAGACACAATTAACCTCGCTGATCTGATCAGGCTG O_anatinus302229 ---TTTGCT-ATGAAGAGGCTTGTATTTTTATTC--CTCTGATCAGACTG O_anatinus303360 ---GATTTC-CTCTGGAGAAAATCCT-GTTT-----ATCTGATCGGGCCT O_anatinus303735 ---TTTGCT-ATGAAGAGGCTTGTATTTTTATTC--CTCTGATCAGACTG O_anatinus302226 ---GATTTC-CTCTGGAGAAAATCCT-GTTTTTT--ATCTGATCGGGCCT O_anatinus302227 ---CTCCTGAAGCTCTGGAGATAGCACTTACCTC---TCTGATCAGGCAT O_cuniculus300493 ---TAAAT--TCTTGAAGAAAATTCT-GTGT-----ATCTGATCAGGCTT O_cuniculus300494 ---CATTTTCCTCTGGAGATAGTTTCTGCCTCACTGGTCTGATCAGGCTG O_latipes300071 ---CT-------GTTACTGGAGAAAGATTT-GAT--TTCTGATCTCAG-- O_latipes300075 ---TGAATC-AT--GAGCAGAGA-ATTT---TGA--CTCTGATCTGAGCT O_latipes300076 ---TTCAGC-ATCTGTGGGGAGA-ACTTTTAGAC--CTCTGATCTGCAGA O_garnettii300500 ---TAAAT--TCCTGAAGAAAATTCT-GTGT-----AAAAAAATAATAAT O_garnettii300707 ---TAAAT--TCTTGAAGAAAATTCT-GTGT-----ATCTGATCGGGCCT P_troglodytes300690 ---TAAAT--TCTTGAAGAAAATTTTTGTGT-----GTCTGATCAGGCCT P_troglodytes300691 ---CATTTTTCTCTGGAGACAGTTTTTGCCTTATGAAACTGATCAGGCTG P_pygmaeus300193 ---TTTTCTTCTCTAGAGAGAGTTTTTACCTTATGGATCTGATCAGGAAA P_pygmaeus300301 ---TTTTCTTCTCTAGAGAGAGTTTTTACCTTATGGATCTGATCAGGAAA P_pygmaeus300753 ---CATTTTTCTCTGGAGACAGTTTTTGCCTTATGGATCTGATCAGGCTG P_pygmaeus300754 ---TAAAT--TCTTGAAGAAAATTTT-GTGT-----GTCTGATCAGGCCT R_norvegicus300598 ---TTAAT--TCTTGAGGGAAAGTGT-GTGT-----ATCTCATCAGGCCT R_norvegicus300981 ---CATTCTCCTCTGGAGATGATTTTTGCCTTGCTGATCTGATGAGGCTG S_araneus300095 ---TTACTG-CTTGTAT---ATTTTTCTTTTCAT--GTCTGAACATGCCA S_araneus300955 ---TGAATC-TCATGAAGAAACTTCT-GTGT-----ATCTGATCAGCCTC S_araneus300956 ---CATTGTTCTTTGGAGATA-TTCATGCCTTATTGATCTGATCAGGTTG S_tridecemlineatus300007 ---TATTCTACTGAAAAAAAAATTTAAATTAGATATATTTAATAGGCCA- S_tridecemlineatus300335 ---TAAAT--TTTTGAAGGAAATTCT-GTGT-----ATCTGATCAGGCCT T_nigroviridis300060 ---CTAAAC-ATCAATGAAGAGG-ACTTTCACCA--CTCTGATCTCAGCA T_nigroviridis300061 ---ATAAAA-ACCAATGAAGAGA-ACTTTCACAA--CTCTGATCTCAGCA T_nigroviridis300169 ---GTCAAA-A---GTGAAGAGT-G-TTGAATGT--CTCTGATTTCAG-- T_truncatus300494 ---CATTTTTCTCTGGAGATAGTTCTTGCCTTATTGATCTGATTAGGCTG T_truncatus300495 ---TAAATA-TCTTGAAGAAAATTCT-GTGT-----ATCTGATCAGGCTT * C_familiaris300344 ---- C_porcellus300869 ---- C_porcellus300870 ---- C_intestinalis300003 TTGT C_intestinalis300004 TTGT C_intestinalis300005 ---- C_savignyi300017 ---- D_rerio300137 CAT- D_rerio300138 ---- D_rerio300139 CAC- D_rerio300140 CAC- D_novemcinctus300570 ---- E_telfairi300427 ---- E_telfairi300807 ---- E_telfairi300808 ---- E_caballus300251 ---- E_caballus300252 ---- E_europaeus300621 ---- E_europaeus300622 ---- G_gorilla300247 ---- G_gorilla300248 ---- H_sapiens300592 ---- H_sapiens300593 ---- L_africana300462 T--- L_africana300463 ---- M_mulatta300617 ---- M_mulatta300618 ---- M_murinus300459 ---- M_murinus300460 ---- M_domestica300136 ---- M_domestica300137 ---- M_musculus300813 ---- M_musculus300814 ---- M_lucifugus300655 ---- O_anatinus302228 ---- O_anatinus302229 ---- O_anatinus303360 ---- O_anatinus303735 ---- O_anatinus302226 ---- O_anatinus302227 ---- O_cuniculus300493 ---- O_cuniculus300494 ---- O_latipes300071 ---- O_latipes300075 GT-- O_latipes300076 ---- O_garnettii300500 T--- O_garnettii300707 ---- P_troglodytes300690 ---- P_troglodytes300691 ---- P_pygmaeus300193 ---- P_pygmaeus300301 ---- P_pygmaeus300753 ---- P_pygmaeus300754 ---- R_norvegicus300598 ---- R_norvegicus300981 ---- S_araneus300095 ---- S_araneus300955 ---- S_araneus300956 ---- S_tridecemlineatus300007 ---- S_tridecemlineatus300335 ---- T_nigroviridis300060 T--- T_nigroviridis300061 ---- T_nigroviridis300169 ---- T_truncatus300494 ---- T_truncatus300495 ----