Family: SNORA54

CLUSTAL W (1.83) multiple sequence alignment C_familiaris300462 AGGCACCATTCGT-GGCCTCTTAGCCTGGCT-GTG-GCTGAC-GGGCTCC C_familiaris300489 AGGCACTGTTCGT-GGCCTGCTAGCCTGGCT-GTG-GCTGGT-GGGCTCC C_porcellus300954 TGGCACTACTCGT-AACCTTTTAACTTGGTT-GTA-GCTAAT-GGGTTCC D_rerio300102 GTGCACTGTTCGTAACCTGTTTCAGCCTACCAGTCTGAGATTTGGGTTCC D_novemcinctus300211 CAGCACTGTTCGT-GACCCGCTAGCCTGTTT-GCT-GCTAAC-GGGTTCC D_melanogaster300247 --GCGCGTACCCTCGATATTTGGGCCTTCCGTGCCATGGAGCTCAATCTT E_telfairi300025 ATGCACTGTTCGT-AACCTGTTATCAGATTT--ACTGCTGAC-GGGTTCC E_telfairi300264 ATGCACTGTTTGT-AACCTGTTATCAGATTT--ACTGCTGGC-GGATTCC E_telfairi300771 CTGCACTGTTCGT-AACCTGTTATCAGATTT--ACTGCTGAC-GGGTTCC E_caballus300387 GAGCACTGTTCGT-GACCTGTTAGTCTGGCT-GTG-GCTTAC-AGGTTCC E_europaeus300683 GAGCACTGTTCGT-GACCTGCCGGCCTGGCC-GTG-GCTGAC-GGGTTCC F_catus300228 AGGCACTGTTCGT-GGCCTGTCAGTCTGGCT-GTG-GCTTAC-GGGCTCC G_gallus300089 ATGCACTGTTCGT-AACCTGTTAGCAGTGTAATTCTGTTAAC-GGGTTCC G_gallus300090 TCGCACTGCTCGT-AACCTTTTGACAGCATATTCCTGTGAAT-AGGTTCC G_gorilla301064 GAGCACTGTTCGT-AACCCGTTAGCCTGGCT-GTA-GCTAAT-GGGTTCC H_sapiens300731 GAGCACTGTTCGT-AACCCGTTAGCCTGGCT-GTA-GCTAAT-GGGTTCC M_mulatta300645 GAGCACTGTTCGTTAACCTGTTAGCCTGGCT-GTA-GCTAAT-GGGTTCC M_murinus300466 GAGCACTGTTCGT-AACCTGTTGACCTGACT-GTG-GCTGAC-AGGTTCC M_musculus300769 CAGCACTGTTCGT-AACCTGTCAGCCTTGCT-GTG-GCTGGT-GGGTTCC M_lucifugus300105 AAGCACTGTTCGT-GACCTGTTAATCTTGCT-GTG-GCTAAC-GGGTTCC M_lucifugus300197 AAGCACTGTTCGT-GACCTGTGGGCCGTGCT-GTG-GCTAAC-GGGTTCC M_lucifugus300406 AAGCACTATTCGT-GACCTGTTGGCCGTGCT-GTG-GCTAAC-GGGTTCC M_lucifugus300786 AAGCACTGTTCGT-GACCTGTGGGCCGTGCT-GTG-GCTAAC-GGGTTCC M_lucifugus300966 AAGCACTGTTCGT-GACCTGTTAGTCTTGCT-GTG-GCTAAC-GGGTTCC M_lucifugus300096 AAGCACTGTTCGT-GACCTGTGGGCCGTGCT-GTG-GCTAAC-GGGTTCC O_cuniculus300507 GAGCACTGTTTGT-AAACTGTTAACCTGGCT-GTA-G-TAAC-AGGTTCC O_cuniculus300427 GAGCACTGTTCGT-GACCCGATAGCCTGGCT-GTG-GCTGAC-GAGTTCC O_garnettii300477 GGGCACTGTTTGT-AACCTGTTGATTTGGCT-ATA-GCTAAT-GGGCTCC O_garnettii300608 GAGCACTGTTCGT-AACCTGTTGACTTGGCC-ATA-GCTAAC-GGG-TCC P_troglodytes300657 GAGCACTGTTCGT-AACCCGTTAGCCTGGCT-GTA-GCTAAT-GGGTTCC P_pygmaeus300732 GAGCACTGTTCGT-AACCTGTTAGCCTGGCT-GTA-GCTAAT-GGGTTCC R_norvegicus301094 AAGCACTGTTCGT-AACCTGTCAGTCTTGCT-GTG-GCTGAC-GGGTTCC S_tridecemlineatus300258 TTGCACTGTTCGT-AACACGTCGGCCTGGTT-GTA-GCTGGC-AGATTCC S_tridecemlineatus300343 TTGCACTGTTCGT-AACCCTTCAGCCTGGCT-GTG-GCTGGC-GGGTTCC T_nigroviridis300033 CTGCACCGTTCGTAACCTGGTTCAGGTTCC--GTGTGA-ACTCGGGTTCC V_komodoensis300044 TTGCACTGTTCGT-AACCTGTGGACAGGCTT-TTCTGCTAAT-GGGTTCC V_komodoensis300045 TTGCACTGTTCGT-AACCTGTATACAGTCTC-TTCTGCTTAT-GGGTTCC X_tropicalis300146 ACGCACTGTTCGT-AATCAGTTGCCATACTC-GT-TGGCAGT-TGGTTCC X_tropicalis300147 ACGCACTGTTCGT-AATCAGTTGCCATACTC-GT-TGGTAGT-TGGTTCC X_tropicalis300148 GTGCACTGTTCGT-AACTTGCT-GCCAGTCT-GTTTGGCAGT-GGGTTCC ** * * C_familiaris300462 ATTCCAGTGTGACAG--CA-GTTCCAGCGGCACT----------TGAC-T C_familiaris300489 ATTCCGATGCTACAG--CA-GCTCCAGCAGCTCCAGCGGCATTGTGAC-T C_porcellus300954 ATTCTAGTGCCACAG--AA-ATTCCAATGACACG----------TGAC-T D_rerio300102 ATTCCAGTGCAAGATTAATAAACTCAGTGAGGCAGGGGA-----GTGG-T D_novemcinctus300211 ATTCCAGTGCAACAT--TATGCCCCAGAACCGACAAC-------TGAC-T D_melanogaster300247 CGCCAGGGGACGCAGAACAGTCAGGGCCAATTACTCGTTATTGCAGGCAT E_telfairi300025 ATTCCAGTGCTACA---GAAATTCCCAGAATAATATA-------AGAC-T E_telfairi300264 ATTCCAGTGCTACA---GAAATTCCCAGAATAATGTA-------AGAC-T E_telfairi300771 ATTCCAGTGCTACA---GAAATCCCCAGAATAATATA-------AGAC-T E_caballus300387 ATTCCAGTGCTACAG--GA-GTTCCAACGACACA----------TGAC-T E_europaeus300683 ATTCCAGTGCCACAG--GA-ACTCCGGCACTGCTGTCGC-----TCAC-C F_catus300228 ATTCCAGTGCGACAG--CA-TTTCCAACGGCACG----------TGAC-T G_gallus300089 ATTCCGGTGCTACAT--GATAACCCCAAGATAACAGA-------AGGC-T G_gallus300090 ATTCCAGTGCTACAA--CAAATCC----AGTAATGGA-------AGGC-T G_gorilla301064 ATTCCGGTGCGATAG--CA-TTTCCAGCGACACA----------TGAC-T H_sapiens300731 ATTCCGGTGCAATAG--CA-TTTCCAGCGACACA----------TGAC-T M_mulatta300645 ATTCCAGTGCAATAG--CA-TTTCCAGCGACACA----------TGAC-T M_murinus300466 ATTCCAGTGCAACAG--CA-TGTCCAGGGACACA----------TGAC-T M_musculus300769 ATTCCAGTGCTACAG--GA-TTTCCAGTGACACATGAC------TGAC-T M_lucifugus300105 ATTCCAGTGCTACAG--CA-GTCCCAGTGAACCGTGAT------TGAC-T M_lucifugus300197 ATTCCAGTGCGACAG--CA-GCCCCACTGCCAGCACAC------TGAC-C M_lucifugus300406 ATTCCAGTGCTACAG--CA-GCCCCACTGCCACTACAC------TGAC-C M_lucifugus300786 ATTCCAGTGCGACAG--CA-GCCCCACTGCCAGCACAC------TGAC-C M_lucifugus300966 ATTCCAGTGCTACAG--CA-GTCCCAGTGAACTGTGAT------TGAC-T M_lucifugus300096 ATTCCAGTGCGACAG--CA-GCCCCACTGCCAGCACAC------TGAC-C O_cuniculus300507 AGTCCAGTGCTACGG--CA-TTTCCAAAGGCACA----------TAAC-T O_cuniculus300427 ATTCCAGTGCCACAG--CATTGCCATGGATTGACACA-------CGAC-T O_garnettii300477 ATTCCAGTGCAACAG--AA-TTTCCAGGGACACA----------TAAC-T O_garnettii300608 AT-CCAGTGCAACAG--CA-TTTCCAGGGACACA----------TGAC-T P_troglodytes300657 ATTCCGGTGCAATAG--CA-TTTCCAGCGACACA----------TGAC-T P_pygmaeus300732 ATTCCGGTGCAATAG--CA-TTTCCAGCGACACA----------TGAC-T R_norvegicus301094 ATTCCAGTGCTACAG--GA-TTTCCAGTGACACATGAC------TGAC-T S_tridecemlineatus300258 ATTTCAGTGCCACAG--CA-TCTCCAGCAATACA----------TAAC-T S_tridecemlineatus300343 ATTCCAGTGCCACAG--CA-TCTCCAGCAACACA----------TGAC-T T_nigroviridis300033 ATTCCGGTGCTAGA---GCAGCTCCGGTGAGGCAGGGGG-----GCGG-C V_komodoensis300044 ATTCCAGTGCTATA---GCAATACCCAACGTAAGAAA-------AAGT-T V_komodoensis300045 ATTCCAGTGCTACA---GTAACATCCAAGATAAGAAA-------AAGC-T X_tropicalis300146 ATTCCGGTGCTATA---GAAACCCCC--TTAAGGACA-------ATGC-A X_tropicalis300147 ATTCCGGTGCTATA---GAAACCCCC--TTAAGGACA-------ATGC-A X_tropicalis300148 ATTCCGGTGCTATAT--TAACTCCAAGGAGAACA----------AGAA-T * C_familiaris300462 GACTGCAT--CGTGGCTCTCAGGTTCAGG-TCCTGGGGACACAG C_familiaris300489 GAATGACT--CGTGGCTCTCAGTTTCAGG-TCCTGGGGACATGG C_porcellus300954 GGCTGACACTAGTGTCTTTCAGTTTCAGGGAATTGGAGACAAAT D_rerio300102 GCCTCATTTGTGCTTTCTCCCTGTTCACT-CTCTGATGACATTC D_novemcinctus300211 GACTGGCCG-TGTGGCTCGCAGTTTTGGG-TCCTGGAGACACAG D_melanogaster300247 TAGAAGCCATTGCGGTCCTGCATCTCCAAATATTGGCCACAGTT E_telfairi300025 GACAAAACG-TGTCTGTCTGATTTTATAT--TTGGGAGACAAAG E_telfairi300264 GACAAAACT-TGTCTGTCTGATTTTATAT--TTGGGAGACAAGG E_telfairi300771 GACAAAACC-CGTCTGTCTGATTTTATAT--TTGGGAGACAA-- E_caballus300387 GACTGACT--GGTGGCTCTCAGCTTCAGG-TCTTGGAGACAAAG E_europaeus300683 GACTGCCC--CGAGGCTCTCGGTTTCAGG-TGCCGGAGACACTG F_catus300228 GACTGACT--CGTGGCTCTCAGTTTCAGG-TCCTGGGGACACAA G_gallus300089 GGCTGTTTG-TTTGCCTGTTCCCTTTATT--TTGGGGGACATAA G_gallus300090 GACAGACTC-CAT----GTCCCTTCCGTA--TTTGGAGACATTC G_gorilla301064 GACTGACT--GGTGGCTTTCAGTTTCAGG-TCTTGGAGACAAAT H_sapiens300731 GACTGACT--GGTGGCTTTCAGTTTCAGG-TCTTGGAGACAAAT M_mulatta300645 GACTGACT--GGTGGCTTTCAGTTTCAGG-TCTTGGAGACAAAT M_murinus300466 GACTGGCT--GATGGCTTTCAGTTTCAGG-TCTTGGAAACAAAT M_musculus300769 GGCTGGCT--AGTGGCTTTCAGTTTCAGG-TCTTGGAGACACAC M_lucifugus300105 GACTGACT--GGTGGCTCTCAGTTTCAGG-TCTTGGAGACAAGC M_lucifugus300197 GCCTGA-T--GGTG-CTCTCAGTGTCAGG-TCTTGGACACAAGC M_lucifugus300406 GCCTGA-T--GGTGGCTCTCAGTTTCAGG-TCTTGGAGACAAGC M_lucifugus300786 GCCTGA-T--GGTG-CTCTCAGTGTCAGG-TCTTGGACACAAGC M_lucifugus300966 GACTGACT--GGTGGCTCTCAGTTTCGGG-TCTTGGAGACAAGC M_lucifugus300096 GCCTGA-T--GGTG-CTCTCAGTGTCAGG-TCTTGGACACAAGC O_cuniculus300507 GACTGACT--AGTGGCTTTCAGTTTCAGG-TCTTGGAGACAAAC O_cuniculus300427 GACTGCCT--GGTGGCTTCCGGTTTCAG--TCCTGGAGACAAAT O_garnettii300477 GACTGATT--GGTGGATTTTGATTTGGGG-TCTTGGAGACATGC O_garnettii300608 GACTGACT--GGTGGCTTTCAGTTTCAGG-TCTTGGAGACAAAT P_troglodytes300657 GACTGACT--GGTGGCTTTCAGTTTCAGG-TCTTGGAGACAAAT P_pygmaeus300732 GACTGACT--GGTGACTTTCAGTTTCAGG-TCTTGGGGACAAAT R_norvegicus301094 GGCTGGCT--AGTGGCTTTCAGTTTCAGG-TCTTGGAGACATAT S_tridecemlineatus300258 GAC----C--AGTGGCTTTCAGTTTCAGG-TCTTGGAGTCAGTG S_tridecemlineatus300343 GACTGACC--AGTGGCTTTCAGTTTCAGG-TCTTGGAGACAGTG T_nigroviridis300033 GCCCTCCTGCGCCCTGCTCCCCGTTCACT-CTCCGGGAACACCG V_komodoensis300044 GGCTGTTTC-TGCCAATGTCTT-CTCTAT--TTGGGTAACACTC V_komodoensis300045 GGCTATTTC-TGCCTGTGTCTT-TGCTAT--TTTGGTTACATCA X_tropicalis300146 GGCCGCTCT-TGTTGGGCTGATGCTCTTT--TTGGGGAACATCT X_tropicalis300147 GGCCGCTCC-TGTTGGGCTGATGCTCTTT--TTGGGGAACATCT X_tropicalis300148 GGCTAATT--ATTTAGTCTGAGTTTGA----CTTGGAAACAGTC * **