Family: SNORA53

CLUSTAL W (1.83) multiple sequence alignment C_familiaris300438 TACATGCTTCCTTAGATCCACCTTTGTGGA-TGCTAGTCTTGAACTGAGTTCTACTTGTA D_rerio300294 CACACGTT-CCTTAGATCCGCCTCTGGGGAGCGTCAGTGCTCTTCT----TCTGCT---- D_rerio300295 CACACGTT-CCTTAGATCCGTCTCTGGGGAGCGTCAGTGCTCTTCT----TCTGCT---- E_telfairi300566 ------CTTCCTTAGATCCACCTTTGTGGA-TGTTAATTTTGAACTGAGTTCTACTTGTA E_telfairi300744 AACATGCTTCCTTAGATCCACCTTTGTGGA-TGTTAATTTTGAACTGAGTTCTACTTGTA E_caballus300268 AACATGCTTCCTTAGATCCACCTTTGTGGG-TGTTAGTCTTGAACTGTGTTCTACTTGTA E_europaeus300446 AACATGCTGCCTTAGATCCACCTTTGTGGA-TGTCAGTCTTGAACTGAGTTCTGCTCGCA F_catus300227 AACATGCTTCCTTAGATCCACCTTTGTGGA-TGCTAATCTTGAACTGAGTTCTACTTGTA G_gallus300026 CACATGCT-CCTTAGATCCATCTTTGTGAG-TAT---CTTTGTGCTGAGTTCTGCTGGAT G_gorilla300023 AACATGCTTCCTTAGATCCACCTTTGTGGA-TG--AATCTTGAACTGAGTTCCACTTGTA H_sapiens300692 ------------------------------------------------------------ E_europaeus300607 ---------------------------------------------------GTGCACATT E_europaeus300670 ---------------------------------------------------GTGCACGTT E_europaeus300713 ---------------------------------------------------GTGCACCTT F_catus300044 ---------------------------------------------------GTGCACATT F_catus300320 ---------------------------------------------------ATGCACATT G_gallus300094 ---------------------------------------------------ATGCACATT G_gorilla301011 ---------------------------------------------------GTGCACATT G_gorilla301012 ---------------------------------------------------GTGCACATT H_sapiens300474 ---------------------------------------------------GTGCACATT L_africana300223 ------------------------------------------------------------ L_africana300378 --------------------------------------------AGACACAATTCAATCC L_africana300460 ---------------------------------------------------GTGCACATT L_africana300050 ---------------------------------------------------GCGCACATT L_africana300062 ----------------------------------GAATATGTTCCTTTCACCTTCTTGCT M_mulatta300137 ---------------------------------------------------GTGCACATG M_mulatta300138 ---------------------------------------------------GGGCACATT M_murinus300084 ---------------------------------------------------GTGCACATT M_domestica300013 ---------------------------------------------------GTGCACATT M_domestica300108 ---------------------------------------------------CTGCACATT M_domestica300109 ---------------------------------------------------GTGCACGTT M_musculus300364 ---------------------------------------------------TTGCACATT M_musculus300804 ---------------------------------------------------TTGCACATT M_musculus300800 ---------------------------------------------------TTGCACATT C_familiaris300438 AACATTTGGTTTCTTGTAGTTCCAGTCAG-GAAACATCCAGCAACTTTTT-TGGTTGTAT D_rerio300294 -GCTCTCTGTGTGAGAGCATCAGGGTCGACCGCAGCTCCCGCCAGCTTTA-CTGCTGTAC D_rerio300295 -GCTCTCTGTGTGAGAGGATCAGGGTCGACCGCAGCTCCCGCCAGCTTTA-CTGCTGTAC E_telfairi300566 AACTCTGTGTTTCTTGTGGTTCCAGTCAAAGAAGCATCCGGCAACTTTT--TGGATGTAC E_telfairi300744 AACTTTGTGTTTCTTGTAGTTCCAGTCAAAGAAACATCCGGCACCTTTTG-TGGTTGTAC E_caballus300268 AACTTCTTGTTTCTTGTAGTTCCGGTCAGAGAAACATCCAGCAACTTTTT-TGGTTGTAT E_europaeus300446 AACTTCCTGTTTCTTGTAGTTCCAGTCAG--AGACATCCGGCAACTTTTT-TGGTTGTAC F_catus300227 AACTTTCTGTTTCTTGTAGTTCCAGTCAGAGAAACATCCAGCAACTTCTT-CGGTTGTAT G_gallus300026 AACTTCA-GTTTCTAGCAGTTCCAGTCAA--AGTTGCTCGGCAACTTTTT-TGGTTGTAC G_gorilla300023 AACTTCTTGTTTCTTGTGGTTCCAGTCAAAGAAACATCCAGCAACTTTTT-TGGTTGTAT H_sapiens300692 ----------------------------------AACATGCTTCCTTATATGTGCTATAC E_europaeus300607 TCATTGACCTGCT--TTCTTCTGCTGGTGTTAGCAGTGTTATTTCTGATG--TGCTATAG E_europaeus300670 TCATTGACTTGCT--TTCTTCTGTTTGTGGGGGCAGTGCTATTTCCTATG--TGCTGTAC E_europaeus300713 TTATTGACATGCT--ATTTTCTGTTTGT-TGAGCAGTGATATTGCTTATG--TGCTGTAC F_catus300044 TCATTACCCCGTG--TTCTCTTGTATATGCGAGCGGTGTTATTTCTTGTG--TGCTGTAC F_catus300320 TCATTGACCTGCT--TTCTTTTGTATATGTGAGCAGTGTTATTTCTTATG--TGCTATAC G_gallus300094 TCATTGACCTGCT--TTCATTGCAAGTGATGAGCAGTGTTATTTCTGGTG--TGCTAAAG G_gorilla301011 TCATTGACATGCT--TTCTTTT----ATGTGAGTAGTGTTATTTCTTATG--TGCTATAC G_gorilla301012 TCATTGTCTTTTTTCTTTATTTCAAGAGGAAAGATATGTA---TCTGATG--TGCTAAAC H_sapiens300474 TCATTGACCTGCT--TTCTTTT----ATGTGAGTAGTGTTATTTCTTATG--TGCTATAC L_africana300223 -------------------------T-TGGAACCAACTCGACAGCACCTAA-TACAATAC L_africana300378 ATAACAACCTGTT--TTCTTATATATATATGAGCAGCCTTATTTCTTATG--TGCCATAC L_africana300460 TCACTGACCTGCT--TTCTTTTATATTTGTGAGCAGTGTTATTTCTTTTG--TGCTATAC L_africana300050 TCTTTGGCCTACT---TCTTTTACATATGTGAGCGGTGTTATTTGTTATG--TGCTATGC L_africana300062 CTAATGACAACCC--AGCTTTCCCTA-TGTGAGCAGTATTATTTCTTCTG--TATTCTTC M_mulatta300137 TCATTGACCTGCT--TTCTTCTGTATATGTGAGCAGTGTTATTTCTTATG--TGCTATAC M_mulatta300138 TCATTGTCTTTTTTCTTTATTTCAAGAGGAAAGATATTT-----CTGATG--TGCTAAAC M_murinus300084 CCATTGACCTGCT--TTCATTTGTATATGTGAGCAGTACTTTTTCTGATG--TGTTATAC M_domestica300013 TCATTGACCTGCTTTCATTGTTCAAGGGATGAGTGTTAA--TTTTTGATG--TGCTATAT M_domestica300108 TCATTGACCTGCTTTCGTTGTAT-TGTGAGCAGTGTTA---TTTCTGATG--TGCTATAT M_domestica300109 TCATTGACCTGCTTTCATTGTTCACGAAAGCAGTGTTA---TTTCTGACG--TGCTATAC M_musculus300364 TCATCAACCTGCT--TTCTTTTGAATATGTGAGCAGTGTTGTTTCTTACG--TGCTATAC M_musculus300804 TCATTGACCTGCT--TTCTTTTGAAAATGTGAGCAGTGTTATTTCTTATG--TGCTATAC M_musculus300800 TCATTGACCTGCT--TTCTTTTGAAAATGTGAGCAGTGTTATTTCTTATG--TGCTATAC C_familiaris300438 AGTCA-AAGGTGCTTGAGTCATTGGCATGTGAGATAAATATACCTGCATGTTAGTCTTAG D_rerio300294 CGTCA-GAGGCGCTTGAGTCATTGGCGTGTGAGATCAGTCCATCTGC----TTACCCAGA D_rerio300295 CGTCA-GAGGCGCTTGAGTCATTGGCGTGTGAGATCAGTCCACCTGC----TTACCCAGA E_telfairi300566 AGCCA-AAGGTGCTTGAGTCATTAA-AGAAAAGAACAAAATGAAAGGATGGTAACATCAA E_telfairi300744 CCTCTTAAGGTGCTTGAGTCATTGGCATGTGAGAGAACTATACCTTC-TACTGTTCTTTG E_caballus300268 AGTCA-AAGGTGCTTGAGTCATTGGCATGTGAGATAAATATACCTGCATGTTAGTCTTAT E_europaeus300446 AGTCA-AAGGTGCTTGAGTCATTGGCATGTGAGAGAAATACACCTGCATGTTAGTCTCCA F_catus300227 AGTCA-AAGGTGCTTGAGTCATTGGCATGTGAGATAAATATACCTGCATGTTAGTCCTAG G_gallus300026 GGTCA-AAGATGCTTGAGTCATTGGCATGTGAGAGTAATATAACTGCATGTTAGCTTTCT G_gorilla300023 AGTCA-AAGGTGCTTGAGTCATTGGCATGTAAGAGAAATATACCTGCATGTTAGTCTAAC H_sapiens300692 AAACAGATGAAGGTTCGAACATTAGCAGTATATCTAAATAGTTGTGCTTCCATGCTGCCA E_europaeus300607 AAATAGCTGAAGGTTAA----TTAGCAGTGTAACTAAA---TAGTC-----GCGCTGCCA E_europaeus300670 AAATCGATGAAGCTTCA----TTAAGAGTCTAACTAAA---TAGTC-----ATGCTGCTA E_europaeus300713 AAATAGATGAAGGTTAA----TTAGCAGTATAACTAGA---TAGAC-----ATGCTGCCA F_catus300044 GGATAGTTGAAGGTTAA----TTAGCAGTATAACTA---AATAGTAAT-----GCTGGCA F_catus300320 AAATAGTTGAAGGCTAA----TTAGCAGTATAACTA---AATAGTAAT-----GCTGCCA G_gallus300094 AAATATTTGAAGGCTAA----TTAGCAGCTTAGCTGTA-CGTAGTTAC----TGCTGCCA G_gorilla301011 AAATAATTGAAGGCTAA----TTAGCAGTATAACTATA-AATAGTAAT-----GCTGCCA G_gorilla301012 AAACCTTTGGAGGTTAA----TTAGCAGCATGACTA-A-TTTAGCCAT----TGCTGCCA H_sapiens300474 AAATAATTGAAGGCTAA----TTAGCAGTATAACTATA-AATAGTAAT-----GCTGCCA L_africana300223 AAATAGTTGAAGGTTAA----TTAGCAGTGTAACTAAA--GTAGGA-----ATGCTGCCA L_africana300378 AAATACTTGAAAGTTAA----TTAGCAGTATAAAT------------------------A L_africana300460 AAATAGTTGAAGGTTAA----TTAGCAGTATAACTA---AGTAGTAAT-----GCTGCCA L_africana300050 AAATTTTTTTTGTTTAT-------GCAA-ATAGTTGAAGGTTA----------ATTAGCA L_africana300062 AAGGAGTTGAAGGTTAG----TTAGCTGTATAACTAA---GTAGCA-----ATGCTGCCA M_mulatta300137 AAATAATTGAAGGCTAA----TTAGCAGTATAACTATA-AAAAGTAAT-----GCTGCCA M_mulatta300138 AAACATTTGGAGGTTAA----TTAGCAGCATGACTA-A-TTTAGTCAT----TGCTGCCA M_murinus300084 AAATAGTTCAAGGTAAG----TTAGCAGTATAGCTATA-AAGAGTAAT-----GTTGCCA M_domestica300013 AATTTATACATGGTTAA----TTAGCAGCAGAACTTGA-TATA---AT-----GCTGCTA M_domestica300108 AATTTGTAGAAGGTTAA----TTAGCAGCATAACTTGG-AATATTAGTA--CTGCTGCCA M_domestica300109 AATTTATAGAAGGTTAA----TTAGCAGTATAACTTGG-TATAGTAAT-----GCTGCCA M_musculus300364 AAATAGTTGAAAGT-AA----TTAGT-GAGTAACTGCC-TATAGTAAT-----TCTGTCA M_musculus300804 AAATAGTTGAAGGTTAA----TTAGCAGAGTAACTGAA-TATAGTAAT-----TCTGCCA M_musculus300800 AAATAGTTGAAGGTTAA----TTAGCAGAGTAACTGAA-TATAGTAAT-----TCTGCCA C_familiaris300438 GTTCTGATAGAAATGACACGCAATTGTGCTGCCATTTTTT---GCTGTCAGGACTCGACT D_rerio300294 ATTCTCTCTGCCCTGAACCTTCACAGGAGTCCACCAGGGCAGAGCTGCTGGGTAGCGGAC D_rerio300295 ATTCTCTCTGCCCTGAACCTTCACAGGACTACAGCAGGGCAGAGCTGCTGGGGAGCGGAC E_telfairi300566 AGGTATTGAGAACTGGTATAAAATGAGAGAAAAAATGCAA----TTATCACAAT------ E_telfairi300744 GTTCTGATGGAAATNNNNNNN--------------------------------------- E_caballus300268 GTTCTGATAGAAATGACATGCAGTTGTGCTGTCATTTTTTTT-ACTATCAGGACTCGACT E_europaeus300446 GTTCTGGTGGGA-TGGCA-GCAGCCG-GCTGCCATTCGCT----CCGCCAGGACTCGACT F_catus300227 GTTCTGATAGAAATGACATGCAATTGTGCTGCCATTTTTTTTTGCTATCAGGACTTGACT G_gallus300026 GTTCTGATAAAAGTGACTGTAAATATGAGAGTCATTTACC---GCTATCAGGACATGGCT G_gorilla300023 GTTCTGATAGAAATGACATGCATTTATGCTGCCATTTGTT---ACTATCAGGACTTGACT H_sapiens300692 GTCTCCTTCAGATAGTT------------------------------------------- E_europaeus300607 GTCTCCTTCAGACAGTT------------------------------------------- E_europaeus300670 GTCT----CAGATAGTT------------------------------------------- E_europaeus300713 GTCTCCTTCACACGGGT------------------------------------------- F_catus300044 GTCTCCTTCAGACAAAT------------------------------------------- F_catus300320 GTCTCCTTCAGACAAAT------------------------------------------- G_gallus300094 GTCTCCTTCATACAAAG------------------------------------------- G_gorilla301011 GTCTCCTTCAGACAAAA------------------------------------------- G_gorilla301012 GTCACCTTCAAACAAGT------------------------------------------- H_sapiens300474 GTCTCCTTCAGACAAAA------------------------------------------- L_africana300223 GTCTCCTTTAAAAAAAA------------------------------------------- L_africana300378 GTATCCTTCAAACAAAC------------------------------------------- L_africana300460 GTCTCCTTCAGACAAAC------------------------------------------- L_africana300050 GTATAA--AAAACAAAA------------------------------------------- L_africana300062 GTCTCCTTCAAAGAAAA------------------------------------------- M_mulatta300137 GTCTCCTTCAGACAAAA------------------------------------------- M_mulatta300138 GTCACCTTCAAACAAGT------------------------------------------- M_murinus300084 GTCTCCTTCGTATAAAA------------------------------------------- M_domestica300013 GT-TCTTTCAAACAAAC------------------------------------------- M_domestica300108 GTCCCCTTCAAACAAAT------------------------------------------- M_domestica300109 GTCTCCTTCAAACACAC------------------------------------------- M_musculus300364 GTGTCCTTCAGACACAC------------------------------------------- M_musculus300804 GTCTCCTTCAGACAAAA------------------------------------------- M_musculus300800 GTCTCCTTCAGACAAAA------------------------------------------- C_familiaris300438 GGTGTGCGGACACT D_rerio300294 ACA----------- D_rerio300295 ACA----------- E_telfairi300566 -------------- E_telfairi300744 -------------- E_caballus300268 GGTGTGCGGACACT E_europaeus300446 GGTGTGCGGACACG F_catus300227 GGTGTGCGGACACT G_gallus300026 GGTATGCAGACATT G_gorilla300023 CGTGTGCGGACATT H_sapiens300692 -------------- E_europaeus300607 -------------- E_europaeus300670 -------------- E_europaeus300713 -------------- F_catus300044 -------------- F_catus300320 -------------- G_gallus300094 -------------- G_gorilla301011 -------------- G_gorilla301012 -------------- H_sapiens300474 -------------- L_africana300223 -------------- L_africana300378 -------------- L_africana300460 -------------- L_africana300050 -------------- L_africana300062 -------------- M_mulatta300137 -------------- M_mulatta300138 -------------- M_murinus300084 -------------- M_domestica300013 -------------- M_domestica300108 -------------- M_domestica300109 -------------- M_musculus300364 -------------- M_musculus300804 -------------- M_musculus300800 --------------