Family: SNORA46

CLUSTAL W (1.83) multiple sequence alignment C_familiaris300066 -AGCACTGTATTGAAGC-CTGTGG-AATAGAATCGTCCCCA--TTCTTGG C_familiaris300418 -AGCACTATATTTAAAC-CTGTGG-ATGGGAATTTTCCCCA--TTCTTGG C_porcellus300919 -AGCACTATATTTAAAC--TATGG-ATGGGAATTTTCCCCA--TTCTTGG D_novemcinctus300150 -ACCACTATATTTAAACCCTGTGG-ATAGGAATTTTCCTCA--TTCTTGA D_novemcinctus300524 -AGCACTATATTTAAAC-CTATGG-ATGGGAATTTTCCCCA--TTCTTGG E_telfairi300063 -AACGCTATACTTAAAC-CAATGG-ATGGGCATTTTCCCCA--TTCTCGG E_telfairi300124 -AGCACTATATTTAAAC-CAATGG-ATGGACATTTTCCCCA--TTCTCGG E_telfairi300126 -AGCGCTATATTTAAAC-CAATGGGATGGACCTTTTCCCCCATTTCTAGG E_telfairi300858 -AGCACTATATTTAAAC-CAATGG-ATGGACATTTTCCCCA--TTCTCGG E_caballus300248 -AGCACTATGTTTAAGC-CTGTGG-ATGGGAATTTTCCCCA--TTCTTGG E_europaeus300586 -AGCACTATATTTAAA--CTGTGG-ACGGGAACCCTCCCTG--TTCTTGG E_europaeus300687 -CGCACTATATTTAAAC--TGTGG-ATGGGAATCTTTACCA--TTCTTAG F_catus300165 -CACTATATATCTAAAC-CTGTCA-ATGGGAATTGTCCCCT--TTCTTGG F_catus300253 -TGCACTATTCTTTAAACCTGTGG-ATGGGAATTTTCCCCA--TTCTTGG G_gallus300044 -AGCACTATTTTTAAAC-CTGTTG-GTGGATTTTCCTGGCCA-TCATGGG G_gorilla300239 -AGCACTATATTTAAAC-CTGTGG-ATGGGAATATTCCCCA--TTCTTGG H_sapiens300589 -AGCACTATATTTAAAC-CTGTGG-ATGGGAATATTCCCCA--TTCTTGG H_sapiens300720 -------------AATCTTACTAGAAAAGTGAATGGCCA----TTCTTGG L_africana300483 -AGCACTATATTTAAAC-CAATGA-ATGGAAATTTTCCCCG--TTCTTGG M_mulatta300558 ---------AGTGAATCTTAGCAGAAAAGTGAATGGCCA----TTCTTGG M_mulatta300613 -AGCACTATATTTAAAC-CTGTGG-ATGGAAATATTCCCCA--TTCTTGG M_murinus300538 -AGCACTATATTTAAAC-CTGTGG-ATGGGAATTTTCCCCA--TTCTTGG M_murinus300528 ------GTTATTAAAATGTTACCC------CATTTTCCCCA--TTCTTGG M_musculus300400 CAGAAGT-TGGGTAAGC--CATGA-ATGGGAAATTTCCTCA--TTCTTGG M_musculus300809 -AGCACTATATTTAAAC-CTATGT-ATGGGAAATTTCCCCA--TTCTTGG M_musculus300354 -AGCACTATATTTAAAC-CTATGG-ATGGGAAATTTCCCCA--CTCTGGA M_lucifugus300955 -GGCACTATATTTAAAC-CTGTGT-ATGGGAATTCTCCCCA--TTCTAGG O_anatinus304514 -AGCACTATTTTTAAAC-CTATTG-ATGGAAAA-CCTCACCA-TCCTAGG O_cuniculus300370 -AGCACTATATTTAAAC-CTACCG-ATGAGAATTTTCCTCA--TTCTTGG O_cuniculus300484 -AGCACTATATTTAAAC-CTATGG-ATGAGAATTTTCCTCA--TTCTTGG O_garnettii300463 -AGCACTATATTTAAGC-CTATGG-ACAGGAATCTTCCCCA--TTCTTGG O_garnettii300601 -AGCACTATATTTAAAA-CTGTGG-GTGGGAATTTTCCTCA--TTGTTGG P_troglodytes300557 -------------AATCTTACTAGAAAAGTGAATGGCCA----TTCTTGG P_troglodytes300687 -AGCACTATATTTAAAC-CTGTGG-ATGGGAATATTCCCCA--TTCTTGG P_pygmaeus300749 -AGCACTATATTTAAAC-CTGTGG-ATGGGCGTATTCCCCA--TTCTTGG P_pygmaeus300788 ---------AGTGACTCTTACTAGAAAAGTGAATGGCCA----TTCTTAG R_norvegicus300374 -AGCACTATATTTAAAC-CTATGG-ATGGGAAATGTCCCCA--TTCTAGG S_araneus300291 -TTCTCTTTATTTAAAC-CAAAGT-ATGGGACTCTTCCCCA--TTCTTGG S_araneus300957 -AGCACTATATTTAAAC-CAATGG-ATGGGACTCTTCCCCA--TTCTTGG S_araneus300903 -AACACTGTATTTAAAC-GAACGG-A-TAGGGTTCTCCT-------TTGG S_tridecemlineatus300337 -AGCACTATATTTAAAC-CTGTGG-ATGGGAATTTTCCCCA--TTCTTGG T_belangeri300212 -AGTTTTATATTTAAGC-CTGTGG-ATGGGAACTTTCCCCA--TTCTTGG T_belangeri300289 -AGCACTATATTTAAGC-CGATGG-ATGGGAACTTTCCCCA--TTCTTGG T_nigroviridis300078 -------GCAGGCTCACTCTGTTC-CTGGCTGCTCGCTCCAG--CCTGGG * C_familiaris300066 TTATGCTGT-AGTGTGAAAGAATTGCT--GGC-----TCTCTG-TTGCAC C_familiaris300418 TTACGCTGT-AGTGCAAAAGAATTCCT---GG--CTCTTTA-TGCTGCAC C_porcellus300919 TTACGCTGT-AGTGCAAAAGAATTCCT---GGCTCTATC-----TTAAAC D_novemcinctus300150 TTATGCTGC-AGTACAAAATAATTCCT--TGG--CTCCTTCCC-TTGCAC D_novemcinctus300524 TTACGCTGT-AGTGCAAAAGAATTCCTT--GGCTCTTTCCA---TTGCAC E_telfairi300063 TTACGCTGT-AGTGCTAACCAATTTCCCT-GGCTCTCCGTCCCCAGGCAC E_telfairi300124 TTACGCTGT-AGTGCTAAAGAATTCCCT--GGCTCTTCTTCCCCAGGCAC E_telfairi300126 TTATGCTGT-AGTGCTAAAGAATTTCCCTGGGCTCTTCTTCCCCACACAC E_telfairi300858 TTACGCTGT-AGTGCTAAAGAATTCCCT--GGCTCTTCTTCCCCAGGCAC E_caballus300248 TTACGCTGT-AGTGCAAAAGAATTCCT---GG--CTCTTTC-TGTTGCAC E_europaeus300586 TTACGCTGT-AGTGCGAAAGGATTCCT--TGG--CCTGCTGTG-CTGCAC E_europaeus300687 TTACGCTGT-AGTGCAAAATAATTTCT--TGAGGTTTCTTGTG-TTGCAC F_catus300165 TCCCACTCT-TGTGTGAAAGAATTCCT---GGCTCTTTCTG---TCGCAC F_catus300253 TTACGCTGT-AGTGCAAAAGAATTCCT---GGCTCTTTCTC---TTGCAC G_gallus300044 TTACGCTGT-AGTGCAAAAGAATCTCCT--GGCTCTTCAG-----AGTAT G_gorilla300239 TTACGCTGT-AGTGCAAAAGAATTCC---TGG--CTCT--CTG-TTGCAC H_sapiens300589 TTACGCTGT-AGTGCAAAAGAATTCC---TGG--CTCT--CTG-TTGCAC H_sapiens300720 TTACTCTGT-AGCACAGAAGAATTCCT---GG--CTTCTTTGTGTTGCAC L_africana300483 TTACGCTGT-AGTGCTAAAGAATTCCTT--GGCTCTTCCTC---TTGCAC M_mulatta300558 TTACTCTGT-AGCACAGAAGAATTCCT---GG--CTTCTTTCTGTTGCAC M_mulatta300613 TTACGCTGT-AGTGCAAAAGAATTCC---TGG--CTCT--CTG-TTGCAC M_murinus300538 T-ACGCTGT-AGTGCAAAAGAATTCC---TGG--CTCTATCTC-TTGCAA M_murinus300528 TTTCGCTGT-AGTGCAAAAGAATTCCT---GGCTCTTTCTC---TTGCAC M_musculus300400 TTACACTATAGTTCGAAAAGAATTCCT---GG--CTTCTTG---TTGCAC M_musculus300809 TTACGCTGT-AGTGCAAAAAGAATTCCT--GGCTCCTTGT-----AGCAC M_musculus300354 TTACGCTGT-AGTGCAAAAAGAATTCCT--GGCTCTGTGT-----TGCAC M_lucifugus300955 TTACGCTGT-AGTGCAAAAGAATTCCT---GG--CTCTTTTCTGTTGCAC O_anatinus304514 TTACGCTAT-GGTGCAAAATAATTTCTT--GGCTCTCCT------AGCAC O_cuniculus300370 TTACGCTGTTAGTGCAAAAGAATGTCCG-TGG--CTCCGTCAG-TTGCAT O_cuniculus300484 TTACGCTGT-AGTGCAAAAGAAAACC---TGG--CTCCATCTG-TTGCAC O_garnettii300463 TTACACTGT-GAAGCAAAAGAATTCC---TGG--TTTTCTC---TTGCAC O_garnettii300601 TTATGCTGT-AGTGTGAAAGAATTCCT--GGC--CTTTTTTCT-CCACA- P_troglodytes300557 TTACTCTGT-AGCACAGAAGAATTCCT---GC--CTTCTTTGTGTTGCAC P_troglodytes300687 TTACGCTGT-AGTGCAAAAGAATTCC---TGG--CTCT--CTG-TTGCAC P_pygmaeus300749 TTACGCTGT-AGTGCAAAAGAATTCC---TGG--CTCT--CTG-TTGCAC P_pygmaeus300788 TTACTCTAT-AGCACAGAATTATCCCT---GG--CTTCTTTGTGTTGCAC R_norvegicus300374 TTACGCTGT-AGTGCGAGAAGAATTCCT--GGCGCCTCAT-----TGCAC S_araneus300291 TTACTCTAT-AGTGCAAACGAATTCC---TGG--CTCTCC----ATGCAC S_araneus300957 TTACGCTGT-AGTGCAAAAGAATTCC---TGG--CTCTTC----ATGCAC S_araneus300903 TCATGCTGT-AGTGCAAAAGAATTCCT--GG------TTTTTG-TTGCAC S_tridecemlineatus300337 TTACGCTGT-AGTGCGAAATAATTCC---TGT--CTCT-TCTG-TTGCAC T_belangeri300212 TTATGCTGT-AGTACAAAAGAATTCCT---GACTCCTTTGG---CTGCAC T_belangeri300289 TTACGCTGT-AGTGCAAAAGAATTCC---TGA--CTCTTTG---ATGCAT T_nigroviridis300078 ACTTTTTTCGCCTGCTATAGGAACATGCAGAATGTTCACTT---TTCCAC * * * C_familiaris300066 AGCCAACTTTGTGCCATTCTGCTGTTGCT-GTACGGAGTTAAGGA--A-T C_familiaris300418 AGCTGACATTGTGCCATTCTGCTGTTGCT-GAATAGAGTTAAGGA--A-C C_porcellus300919 AGCTGACT-TGTCTCATTCTGCTGTTGCT-TTGTGGAGTTAAGGT--A-C D_novemcinctus300150 AGTTGACTATGTGCAAATTTGCTGTTCCT-CTGTGGAATTAATAA--A-C D_novemcinctus300524 AGCTGACTATGTGCCATTCTGCTGTTGCT-CTTTGGAGTTAAGGA--A-C E_telfairi300063 CGCTGACTGCC--AGTTGG--CTGTTGCT-TTGTGCAGTGAAGGA--A-C E_telfairi300124 AGCTGACTGCC--ATTTGG--CTGTTGCT-TTGTGGAGTGAAGGA--A-C E_telfairi300126 AGCTGACTGCC--ATTTGG--CTGTTGCT-TTGTGGAGTGAAGGA--A-C E_telfairi300858 AGCTGACCGCC--ATTTGG--CTGTTGCT-TTGTGGAGTGAAGGA--A-C E_caballus300248 AGCTGACTTTGTGCCAGTCTGCTGGTGCT-GTATGGAGTTAAGGA--A-C E_europaeus300586 A-CGGATTGTCTGTCAGTCTGCTGT-CCT-GCCTGGTGCCAAGAA--A-C E_europaeus300687 AGCTGACTT--TGCCAATCTGCTGTTGCT-ATATGAAGTTAAGGA--A-C F_catus300165 AGCTGACTTCGTGCCATTCTGCTGTTGCT-GTATAGAGTTAGGGA--A-C F_catus300253 AGCTGACC---TGCCATTCTGCTGTTGCT-ATGTAGAGTTAAGGA--A-C G_gallus300044 AGTTGGCCTTC--TGTTTG-GCTGATGCTGCTCTGAAGCTAAGGG--A-C G_gorilla300239 AGCTGACT-TGTGCCATTCTGCTGTTGCT-GTATAGAGTTAAGGA--A-C H_sapiens300589 AGCTGACT-TGTGCCATTCTGCTGTTGCT-GTATAGAGTTAAGGA--A-C H_sapiens300720 AGCTGACT-TGTGCCATTCTGCTGCTATA-GTGTGGAGTTGAGAA--A-C L_africana300483 AGCTGACTCTGTGCCATTCTGCTGTTGCT-GTATGGAGTTAAGGA--A-C M_mulatta300558 AGCTGACT-TGTACCATTCTGCTGCTATA-GTGTGGAGTTGAGAA--A-C M_mulatta300613 AGCTGACT-TGTGCCATTCTGCTGTTGCT-GTATGGAGTTAAGGA--A-C M_murinus300538 AGCTTACT-TATACTATACTGCTGTGGCT-ATATGGAGTAAAGGA----C M_murinus300528 AGCTGACT-TGTACTATTCTGCTGTTGCT-ATATGGAGTTAAGGA--A-C M_musculus300400 AGCTGACT-CATGCCATTTTGCTGCT----TCATGGAGTTAAGGA--A-C M_musculus300809 AGCTGACTGATG-CCATTTTGCTGTTGCTTTATGGAGTTAAGGGA--CAT M_musculus300354 AGCTGATTCATG-CCATGGCTCCGTG------------------------ M_lucifugus300955 AGCTGACATTGTGCCATTCTGCTGTTGCT-GGATGGAGTTAAGGA--A-C O_anatinus304514 AGCTGACTGTT--CCTTTATACTGATGCTGTGGTGGAGTTAAAGA--AAC O_cuniculus300370 AGCTGACTTGG-GCCATTCTGCTGTTGCT-TAATGGAGTTAAG-A--A-C O_cuniculus300484 AGCTTACTTGT-ACCATTCTGCTGTTGCT-TAATGGAGTTAAGGA--A-C O_garnettii300463 AGCTGACTTGT-ACCATTCTGGTGT---T-CAATGGAGTTAAGGA--G-C O_garnettii300601 A-CTGACT-TACACCATTCTGCTGTTCCT-ATATGGAATTAAGGA--G-C P_troglodytes300557 AGCTGACT-TGTGCCATTCTGCTGCTATA-GTGTGGAGTTGAGAA--A-C P_troglodytes300687 AGCTGACT-TGTGCCATTCTGCTGTTGCT-GTATAGAGTTAAGGA--A-C P_pygmaeus300749 AGCTGACT-TGTGCCATTCTGCTGTTGCT-GTATAGAGTTAAGGA--A-C P_pygmaeus300788 AGCTGACT-TGTGCCATTCTGCTGCTATA-GTGTGGAGCTGAGAA--A-C R_norvegicus300374 AGCTGACTCGCGCCGTTTG-GCTGTTGCT-CTGTG-AGCTAAGGG--A-C S_araneus300291 GGCTGACTTTCTGCCATTCTGCTGTTGCG-ATATTGAGTTAAGGA--A-C S_araneus300957 AGCTGACTTTCTGCCATTCTGCTGTTGCA-ATATTGAGTTAAGGA--A-C S_araneus300903 AGCCACCTTTCTGCCAATTTGCTGTTGCT-ATACAGAGCTAAAGA--G-C S_tridecemlineatus300337 AGCTGACT-TGTATAATTCTGCTGTTGCT-TTATGGAGTTAAGGA--A-C T_belangeri300212 GGCCAACT-TGCACCATTCTGCTGTTGCT-CTATGGAGTTGAGGA--A-C T_belangeri300289 AGCTGACTTGC-ACCATTCTGCTGTTGCA-TTATGGAGTTAAGGA--A-C T_nigroviridis300078 -GCTTACC----AACATTAAGCGGTGGGTAATGTGTTCTGCAACATCAGC * C_familiaris300066 GTAA---------------------------------------------- C_familiaris300418 ATAA---------------------------------------------- C_porcellus300919 AGAA---------------------------------------------- D_novemcinctus300150 ATGA---------------------------------------------- D_novemcinctus300524 ACAA---------------------------------------------- E_telfairi300063 ACAG---------------------------------------------- E_telfairi300124 ACAG---------------------------------------------- E_telfairi300126 ACAG---------------------------------------------- E_telfairi300858 ACAG---------------------------------------------- E_caballus300248 ATAA---------------------------------------------- E_europaeus300586 ATGT---------------------------------------------- E_europaeus300687 ATAT---------------------------------------------- F_catus300165 ATAC---------------------------------------------- F_catus300253 ATAA---------------------------------------------- G_gallus300044 AGAG---------------------------------------------- G_gorilla300239 ATGG---------------------------------------------- H_sapiens300589 ATGG---------------------------------------------- H_sapiens300720 ATGA---------------------------------------------- L_africana300483 ATAA---------------------------------------------- M_mulatta300558 ATGA---------------------------------------------- M_mulatta300613 ATGG---------------------------------------------- M_murinus300538 ATGA---------------------------------------------- M_murinus300528 ATGA---------------------------------------------- M_musculus300400 ATGA---------------------------------------------- M_musculus300809 GA------------------------------------------------ M_musculus300354 -------------------------------------------------- M_lucifugus300955 ATAA---------------------------------------------- O_anatinus304514 ATTA---------------------------------------------- O_cuniculus300370 GTTGG--------------------------------------------- O_cuniculus300484 ATTG---------------------------------------------- O_garnettii300463 TTTA---------------------------------------------- O_garnettii300601 ATGG---------------------------------------------- P_troglodytes300557 ATGA---------------------------------------------- P_troglodytes300687 ATGG---------------------------------------------- P_pygmaeus300749 ATGG---------------------------------------------- P_pygmaeus300788 ATGA---------------------------------------------- R_norvegicus300374 ATGA---------------------------------------------- S_araneus300291 ATGT---------------------------------------------- S_araneus300957 ATGT---------------------------------------------- S_araneus300903 ACTT---------------------------------------------- S_tridecemlineatus300337 ATGA---------------------------------------------- T_belangeri300212 ATAC---------------------------------------------- T_belangeri300289 ATATGGACTGGTACTGCTTTGACCTATCAAAGTGGCGAAGCTGCCATGGG T_nigroviridis300078 CTGGACACTG---------------------------------------- C_familiaris300066 --------- C_familiaris300418 --------- C_porcellus300919 --------- D_novemcinctus300150 --------- D_novemcinctus300524 --------- E_telfairi300063 --------- E_telfairi300124 --------- E_telfairi300126 --------- E_telfairi300858 --------- E_caballus300248 --------- E_europaeus300586 --------- E_europaeus300687 --------- F_catus300165 --------- F_catus300253 --------- G_gallus300044 --------- G_gorilla300239 --------- H_sapiens300589 --------- H_sapiens300720 --------- L_africana300483 --------- M_mulatta300558 --------- M_mulatta300613 --------- M_murinus300538 --------- M_murinus300528 --------- M_musculus300400 --------- M_musculus300809 --------- M_musculus300354 --------- M_lucifugus300955 --------- O_anatinus304514 --------- O_cuniculus300370 --------- O_cuniculus300484 --------- O_garnettii300463 --------- O_garnettii300601 --------- P_troglodytes300557 --------- P_troglodytes300687 --------- P_pygmaeus300749 --------- P_pygmaeus300788 --------- R_norvegicus300374 --------- S_araneus300291 --------- S_araneus300957 --------- S_araneus300903 --------- S_tridecemlineatus300337 --------- T_belangeri300212 --------- T_belangeri300289 GACACGGGG T_nigroviridis300078 ---------