snOPY snoRNA Orthological Gene Database

Family: SNORA4

CLUSTAL W (1.83) multiple sequence alignment C_familiaris300424 -------CTACCAAA--AGT--TTGTTTTGGGGG--GAAGGTTTTTT---AATAACCTTT C_porcellus300269 -------AGACCAAA--AGTTAAATTTCG--AGGGTAAAGTTTTT----TAATAAGCTTT C_porcellus300270 -------CTACCAAA--AGTTAAATTTCG--AGGGCAAAGTTTTT----AAATAAGCTTT C_porcellus300881 -------CTACCAAA--AGTTAAATTTCA--AGGGTAAAGTTTTT----AAATAAGCTTT D_novemcinctus300558 -------CTCCCAAA--AGT--TAT---TCAGGG--GAAGGTTTTTT---AATAACCTTT D_melanogaster300242 --------------------------CCGTTCTTGTGTTATTTTCTGGACGTT--GTTCA D_melanogaster300243 --------------------------CCGTTCTTGTGTTATTCGCTAAGCGAT-TACCTA D_melanogaster300244 --------------------------CCGTTCTTGTGTTATTCGCTAGATCTT--TTCAT D_melanogaster300245 --------------------------TCGTTTTTGTGTTATTTGCTGGAAGTTACATCCA D_melanogaster300246 --------------------------TCGTTCTTGTGTTTTTCGCTGGCTGTC-CTTCCA E_telfairi300087 -------CTACTCAA--AGTT-ATTTTTTGTGGC--AAGGTTTTTTTT-CAATAATCCCT E_telfairi300121 -------ATATCAGA--AGTTGATTTTTTGAGGC--AAGGGGTTTTTA---GTAACGTTT E_telfairi300151 -------CTACCAAA--AGTTCATTTTTGGAGGC--AAGGGTTTTTTA---ATAACCTTT E_telfairi300248 ------CTTCCAAAA--AGTTCATTTTTGGAGGGCAAGGGGTTTTTTA---ATAACCTTT E_telfairi300525 -------TTACCAAA--AGTTGATTTTTGGAGGC--AAGGGTTTTTTA---ATAACCTTT E_telfairi300607 -----------------------------------TTACTTTTTCTTT-ATGT---TTGA E_telfairi300681 -------CTACCAAA--AGTTGATTTTTGGAGGC--AAGGGTTTTTTC---ATAACCTTT E_telfairi300794 -------ATACCAAA--AGTTGATTTTTGGAGGC--AAGGGTTTTTTA---ATAACCTTT E_telfairi300806 -------CTACCAAA--AGTTGATTTTTGGAGGC--AAGGGTTTTTTC---ATAACCTTT E_caballus300349 -------ATACCAAA--AGTG-TTTTTTTTGTGG--GAAGGTTTTTT---AATAACCTTT F_catus300326 -------CTACCAAA--AGT--TTGTTTTGGGGG--GAAGGTTTTTT---AATAACCTTT G_gorilla300627 -------CTACCAAAAAAGTTAGTTTTTT-ATGGGGGAGGCTTTCT---AAATAACCTTT G_gorilla300676 -------CTACCAAA--AGTTAGCTTTTTGGGGG--GCAGGTTTT-T--AAGTAACCTTT G_gorilla300896 -------CTATCAAA--AGTTACTTTTTGTGGGGTGGAA--GTTTTTA-AAATAACCTTT H_sapiens300617 --------TACCAAA--AGTTAGCTTTTTGGGGG--GCAGGTTTT-T--AAGTAACCTTT L_africana300459 -------CTACCAAA--AGTT-ATTTTG-GGGGC--AAGGTTTTTTTT--AATAACCTTT M_mulatta300061 -------CTATCAAA--AGTTACTTTTTGTGGGGTGGAA--GTTTTTA-AAATAACCTTT M_mulatta300412 -------CAACCAAA--AGCTAATTTTTTTGTGGGGAAAGCTTTCT---AAATAACCTTT M_mulatta300610 -------CTACCAAA--AGTTAGCTTTTTGGGGG--GAAGGTTTT-T--AAGTAACCTTT M_murinus300127 -------TTACCAAA--AGGTAATTTGGTTGGAG--AGAGGTTGT-TA-AAATAACCTTT M_murinus300494 -------CTACCAAA--AGTTAGTTTTGG--AGGGGGAAGGTTTTGTTATAATAACCTTC M_musculus300850 ---------TCAGTAAATGTT------AAAACATTAAAAAGCATGACC-TGTAAACTTAA M_musculus300876 -------GTACCAAA--AGCTAGATTTGT---GGGGAAGGTTT-ATTA--AATAACCTTA M_musculus300370 TGACCAGTTTCTGTCCATCCTGCTCATAAGAAGTGCTCCAGAATATTA-AAAAGCCTTAA M_musculus300421 --------------------------------CCACAAAAAAATGGAC-AAA---AGTAA M_musculus300794 -------CTACCAGA--AGCTATATTTGT---GGGGAAGGTTTTATTA--AATTACCTTA M_lucifugus300695 -------CTACCAAA--AGT--TTTATTTTGGGT--GAAGGTTTTTT---AATAACCTTT M_lucifugus300002 -----------------TTAAAATATTGATGTTATATGGAAGGTTTTTATAATAAACTTT M_lucifugus300441 -------CTACCAAA--AGT--TTTATTTTGGGT--GAAGGTTTTTT---AATAACCTTT M_lucifugus300641 -------ATGTCAGTG-ATTGAGTATTGACACAGGAAGGTTTTATTTTTTAATAACCTTT O_anatinus304520 -------GTTCCAAA--AGCCAACGTTGC---GGGGAAGGCCGTGACC-----AGCCTTC O_cuniculus300504 -------CTACCAAA--AGTTAACATTTT-GGGGGGAAGGTTTTGT---TAATAACCTTT O_garnettii300443 -------TAGTTAAA--AATCACTCATCATGGGGGGGAAATGTTTTTG-TAATACCATTT P_troglodytes300009 -------CTATCAAA--AGTTACTTTTTGTGTGGTGGAA--GTTTTTA-AAATAACCTTT P_troglodytes300014 -------CTACCAAA--AGTTAATTTTTT-ATGGGGAAGGCTTTCT---AAATAACCTTT P_troglodytes300082 -------TTACCAAA--AGTTAATGTTTTCAGAG--AATGCTTTTGTT-AAAAAGCCTTT P_troglodytes300634 -------CTACCAAA--AGTTAGCTTTTTGGGGG--GCAGGTTTT-T--AAGTAACCTTT P_pygmaeus300052 -------TTACCAAA--AGTTAATGTTTTCAGAG--AATGCTTTTGTT-AAAAAGCCTTT P_pygmaeus300206 -------CTACCAAA--AGTTAATTTTTT-ACGGGCAAGGCTTTCT---AAATAACCTTT P_pygmaeus300507 -------CTATCAAA--AGTTACTTTTTGTGGGGTGGAA--GTTTTTA-AAATAACCTTT P_pygmaeus300730 -------CTACCAAA--AGTTAGCTTTTTGGGGG--GAAGGTTTT-T--AAGTAACCTTT R_norvegicus300461 -----------TAAACTCATTTAAATAAGATGAAATTCAGGTTTTATT-AAATAACCTTA R_norvegicus300656 -------GCACTAAAGAGGCTTTATCTTGATACTGCAACACTTTCATT-AAGT--ACTGG R_norvegicus300801 -----------CAAACAAATAAAAACCTAATAATATAAAGGTCTTGCT-AA-TAACCTTA R_norvegicus301033 -------GTACCAAA--AGCTAGATTTGT---GGAAAAGGTTTTATTT--AATAACCTTA R_norvegicus301057 ----------------AGATCCTGTTTTATCTGCTTCAAACTTGGTTA-AGAAAAATTGC S_araneus300974 -------CTACCAAA--AGATAATTCTT----GG--GGAGGTTTT-T--TAGTAACCTTT T_belangeri300360 -------ATACCAAA--AGTAAAGTGTTTGGGGG--GAAGGTTTT-TC-TGATAACCTTT T_belangeri300392 -------CTACCAAA--AGTAA-GTGTTTTGGGG--GAAGGTTTT-TC-TGATAACCTTG T_truncatus300290 -------TCACCAAA--AGTTTG--TTTG--GGGGGAAGGTTTTT----TAATAACCTTT C_familiaris300424 A--CCAGA-TTGGGCTGTTTGGGAGAT----TAAAGAAA--AGACCA---CACTCCACAG C_porcellus300269 A--CCAAT-CTAAGCTCTTTGGGAGGC----TAAA------AGACCA---CACTCCACAG C_porcellus300270 A--CCAAT-CTAGGCTGTTTGGGAGAC----TAAA------AGACCA---CACTCCACAG C_porcellus300881 A--CCAAT-CTAGGCTATTTGGGAGAC----TAAA------AGACCA---CACTCCACAG D_novemcinctus300558 A--CCAAT-TTGGGCTGTTTGGGAGAA----TAAAAG-----GACCA---CACTCCACAG D_melanogaster300242 AGTCCAGC----GATCGTCAAACAGAAC--GCAAAGTAATG-CAACGAATCACTCCACAA D_melanogaster300243 AGCTCAGC----GATTGTCAAACAGAAC--GTAGATTAACTGCCGCTAATCACTCCACAA D_melanogaster300244 GGCCTAGC----GAGCGTCAAACAGAAC--GCAAACTGAAG-CAACGAATCACTCCACAA D_melanogaster300245 AAGCCAGT----GATTGTCAAACAGAAC--GTAAATTAATG-CGGCT-ATCACTCCACAA D_melanogaster300246 AAGCCAGT----GATTGTCAAACAGAAC--GTACATTAATGGCAGCTTATCACTCCACAA E_telfairi300087 A--CCAGTTTGGG-CTATTTGGGAAAA----TAAAGAGA--AGGCCA---CACTCCCCAG E_telfairi300121 A--CCAGTTTGGG-CTGTTTGGGAGAA----TAGAGAGA--AGACCA---CACTCCACAG E_telfairi300151 A--CCAGTGTGGG-CTGTTTGGGAGAA----AAAAGAGA--AGACC-----ACACTCCAC E_telfairi300248 TACCCAGTGTGGGGCTGTTTGGAAGAA----AAAAAGAG--AAAGAC---CACACTCCAC E_telfairi300525 A--CCAGTTTGGG-CTGTTTGGGAGAA----TAAAGAGA--AGACTG---CATTCCACAG E_telfairi300607 CA-TCAAT-TTTTAAAATGTGTCA-AA----TGA---AG----ACCA---CACTCCACAG E_telfairi300681 A--CCAGTGTGGG-CTGTTTGGGAGAA----TAAAGAGA--CCAC------ACTCCACAG E_telfairi300794 A--CCAGTTTGGG-CTGTTTGGGAGAA----TAAAGAGA--AGACCA---CACTCCACAG E_telfairi300806 A--CCAATATGGG-CTGTTTGGGAGAA----TAAAGTGG------------ACTATATAT E_caballus300349 A--CCAAC-TTAGGGTTTTTGGGAGAG----TAAAAAA---AGGCCA---TGCTCCACAG F_catus300326 A--CCAAC-TTGGGCTCTTTGGGAGAA----TAAAGAAC--AGACCA---CACTCCACAG G_gorilla300627 A--CCAAT-TTGGGCTATTTGGGAGAG----TAAAGGAA--AGACCA---CACTCCACAG G_gorilla300676 G--CCAAC-TTGGGCTATTTGGAAGAG----TAAAAG------ACCA---CACTCCACAG G_gorilla300896 A--CCTAC-GTGGGCTGTTTTGGAAAA----TAAAGAAA--AGACCA---CACTCAGCAG H_sapiens300617 G--CCAAC-TTGGGCTATTTGGAAGAG----TAAAAG------ACCA---CACTCCACAG L_africana300459 A--CCATTTCGGG-CTATTTGGGAGAA----TAAAGAAA--AGACCA---CACTCCACAG M_mulatta300061 A--CCTAC-TTGGGCTGTTTTGGAAAA----TAAAGAAA--AGACCA---CACATAACAG M_mulatta300412 A--CCAAT-TTGGGCTACTTGGAAGAG----TAAAGGAA--AGACCG---CACTCCA--G M_mulatta300610 G--CCAGC-TTGGGCTATTTGGAAGAG----TAAAAG-----GACCA---CACTCCACAG M_murinus300127 A--CCAGC-TTGGTCTATTTGGGAGAA----TAAAGAA----ATATT---CTCTCCACAG M_murinus300494 A--CCACC-TTGGGCTGTTTGGGAGAG----CAAAGAAA--AGACCA---CACTCCACAG M_musculus300850 ---CTAAT-CCAGGCTATTTGGCAGAA----GGAATAAG----ACCA---CACTCCACAG M_musculus300876 A--CCAAT-TCAGGCTATTTGGTAGAA----TAAGTAAG----ACCA---CACTCCACAG M_musculus300370 ---CCAAT-TCATGCTATTTGGCAGAA----TGAGTAAG----ACCA---CACTCCACTG M_musculus300421 AA-CCA---TCAGGCTATTTGATAGAA----TGAGTAAG----ACCA---CACTCCACAG M_musculus300794 A--CCAAT-GCAGGCTATTTGGTAGAA----TGAGTAAG----ACCA---CACTCTGCAG M_lucifugus300695 A--CCACC-TTAGGCTCTTTGGGAGAA----TAAA-------GACCA---CACTCCACAG M_lucifugus300002 A--CCAAC-TTGGGCTATTTGGGGGAA----TAAAGAAA----ACCA---CACTCCACAG M_lucifugus300441 A--CCAAC-TTAGGCTCTTTGGGAGAA----TAAA-------GACCA---CACTCCACAG M_lucifugus300641 A--CCAAC-TTGGGCTATTTGGGAGAA----TAAAAAAG----ACCA---CACTCTACAG O_anatinus304520 G--CCGGG-TCGGGCTCTTTGGAAGAG----AAAAAAAG----ACCG---CACTCCACGG O_cuniculus300504 A--CCAAC-TTTGGCTATTTGGGAGAG----TAAAGAAA--AGACCA---CACTCCACAG O_garnettii300443 A--TGAAT-TTGGGCTATTTGGGAAGA----TAAAGAAA--ACACCA---CCCTCCACAG P_troglodytes300009 A--CCTAC-GTGGGCTGTTTTGGAAAA----TAAAGAAA--AGACCA---CACTCAGCAG P_troglodytes300014 A--CCAAT-TTGGGCTATTTGGGAGAGAGAGTAAAGGAA--AGACCA---CACTCCACAG P_troglodytes300082 A--CCAAC-TTGGGCTGTTTGGGATAA----TAATGTT----GACCA---TTTTCCACAG P_troglodytes300634 G--CCAAC-TTGGGCTATTTGGAAGAG----TAAAAG------ACCA---CACTCCACAG P_pygmaeus300052 A--CCAAC-TTGGGCTGTTTGGGATAA----TAATGTT----GACCA---CTTTCCACAG P_pygmaeus300206 A--CCAAT-TTGGGCTATTTGGGAGAG----TAAAGGAA--AGACCA---CACTCCACAG P_pygmaeus300507 A--CCTAC-TTGGGCTGTTTTGGAAAA----TAAAGAAA--AGACCA---CACTCAGCAG P_pygmaeus300730 G--CCAGC-TTGGGCTATTTGGAAGAG----TAAAAGA---AGACCA---CACTCCACAG R_norvegicus300461 A--CCAAT-TCAGGCTATTTGGCAAAA----TGAGTAAG----ACCA---CACTCCACAG R_norvegicus300656 AA-GCA---TCACACTATTTGGCAGAA----TGAGTAAG----ACCA---CACTCCACAG R_norvegicus300801 A--CCAAT-TCATGCTATTTGGCAGAA----TGAGTAAG----ACCA---CACTCCACAG R_norvegicus301033 A--CCAGT-TCACGCTATTTGGCAGAA----TGAGTAAG----ACCA---CACTCCACAG R_norvegicus301057 TACTCAAT-TCAGGCTATTTGGCAGAA----TGAGTAAG----AGCA---CACTCCACAG S_araneus300974 G--CCAGC-TTGAACTTTTTGGGAGAA----AAAAAGCTGAAGACCA---CACTCCACAG T_belangeri300360 A--CCACC-TTGAGCTATTTGGGAGAT----TAAGGA-------CCA---CACTCCACAG T_belangeri300392 A--CCACC-TTGAGCTATTTGGGAGAT----TAAAGA-------CCA---CACTCCACAG T_truncatus300290 A--CCAATTCTAGGCTATTTGGGAGAA----TAAAGAAA--AGACCA---CACTCCACAG C_familiaris300424 TGGGCT-ATATCACTTAAC---GTATAGTTCACTACTATTTTGTGGCCTACATT- C_porcellus300269 TGAACT-ATACCACTCAG-----TATAGTTCATTACTATTTTGTGGC-TACATT- C_porcellus300270 TGAACT-ATACCACTCAG-----TATAGTTCATTACTATTTTGTGGC-TACATT- C_porcellus300881 TGAACT-ATACCACTCAG-----TATAGTTCATTACTATTTTGTGGC-TACATT- D_novemcinctus300558 TGGGCT-ATTGCACTTAAC---GTA--GCTCACTACTATTCCGTGGCCTACATT- D_melanogaster300242 T--GTTGGGTCTACTTTGCCAGGACAGCATCATTACTTAAGGA-TTGCAACAGCA D_melanogaster300243 T--GTTGAGCCGACTCT-CAACGGCTACTGCATTACTATATG---CGCCACATTC D_melanogaster300244 T--GGTGGGTCTACTTTACCAGGACTGCATCATTACTAAAGGA-TTGCTACAGTT D_melanogaster300245 T--GTTGAGCCGGCTTT-CCAGGGCTACTGCATTACTTTTCGGCTCGCCACACTC D_melanogaster300246 T--GTTGAGCCGAGTTT-TCACGGTTACTGCATTACTTTCCGGCTCGCCACATCA E_telfairi300087 T-GGGCTATACCACTTAG-----TATAGTTCACTACTATTTTGTGGCCTACATT- E_telfairi300121 T-GGGCTATACCACTTAG-----CATAGTTCGCTGCTATTTTGTGGTCTACATT- E_telfairi300151 AGTGGCTATACCACTTAG-----TATAGTTCGCTACTATTTTGTGGCCTACATT- E_telfairi300248 AGTGGCTATACCACTTAG-----TATAGTTCGCTACTATTTTGTGGCCTACATT- E_telfairi300525 T-GGGCTATACCACTTAG-----TACAGTTGGCTACTATTTTGTGGCCTACATT- E_telfairi300607 TGGGCT-ATACCACTTAG-----TATAGTTCGCTACAATTTTGTGGCCTACATT- E_telfairi300681 T-GGACTATACCACTTAG-----TATAGTTCGCTACTATTTTGTGGCCTACAGT- E_telfairi300794 T-GGGCTATACCACTTAG-----TATAGTTCGCTACTATTTTGTGGCCTACAAT- E_telfairi300806 A-TATATATATATATATA-----TATACTATATCACT-TAGTATAGT-------- E_caballus300349 TGGGCT-ATACCACTTAAT---GTA--GTTCACTACTATTTTGTGGCCTACATT- F_catus300326 TGGGCT-ATACCACTTAAC-----ATAGTTCACTACTATTTTGTGGCCTACATT- G_gorilla300627 CGGGCT-ATACCA-----------ATAGTTCACTACTATTTTGTGGTCTACATT- G_gorilla300676 TGGGCT-ATACCACTTAG-----TATAGTTCGCTACTATTTTGTGGCCTACATG- G_gorilla300896 AGGGCT-ATACCCCTTAG-----TATAGTTCACCACTATTTTGCAGCTTATATT- H_sapiens300617 TGGGCT-ATACCACTTAG-----TATAGTTCGCTACTATTTTGTGGCCTACATG- L_africana300459 T-GGGCTATACCACTCAG-----TATAGTTCGCTACTATTTTGTGGCCTACAGT- M_mulatta300061 TGGGCT-ATATCCCTTAG-----TATAGTTCACCACTATTTTGTGGCTTATATT- M_mulatta300412 TGGGTT-ATACCA-----------ATAGTTCAGTACTATTTTGTGGCCTACATT- M_mulatta300610 TGGGCT-ATACCACTTAG-----TATAGTTCGCTACTATTTTGTGGCCTACATG- M_murinus300127 TGGCCT-GTACAACTTA-----GTATAATTTACTACTACTTTATGGCCTATATT- M_murinus300494 TGGGCT-ATACCACTTAG-----TATAGTTCATTACTATTTTGTGGCCTACATT- M_musculus300850 TAGGCT-GTACCCCTTAG-----TATAGTGCATTACTATATTGTGGTCTACATT- M_musculus300876 TGGGCT-ATACCACTTAG-----TATGGTTCATTACTATATTGTGGCCTACATT- M_musculus300370 TGGGCT-ATACTACTTAG-----TATGGTTCATTACTATATTGTGGCCTACATT- M_musculus300421 TGGGCT-ATACCACTTTG-----TATGGTTCATTATTATATTGTGGCCTACATT- M_musculus300794 TGGGAT-ATACCACTTAG-----TATGGTTCATTACTATATTGTGGCCTACATT- M_lucifugus300695 TGGACT-ATATCACTAAAC---ATATAGCCCATTACTATTTTGTGGCCTACATT- M_lucifugus300002 TGGGCT-ATATCACTAAAT---ATACAGTTCACTACTATTTTGTGGTCTATGTG- M_lucifugus300441 TGGACT-ATATCACTAAAC---ATATAGCCCATTACTATTTTGTGGCCTACATT- M_lucifugus300641 AAGGCT-GTATCACTAAGC---AAATAGCTCACTACTATTT-GTGGCCTACATT- O_anatinus304520 TGGACT-ATATATCCGGT-----TGTAGTTCATTACTGTAAGGTGGCCAACAGA- O_cuniculus300504 TGGGCTTATACCATTTAG-----TATAGTTCACTACTATCTTGTGGCCTACAGT- O_garnettii300443 TGGGCT-ATTCCACCTAG-----GGTAGCTCACTACAATTTTGTGGCCTCCATT- P_troglodytes300009 AGGGCT-ATACCCCTTAG-----TATAGTTCACCACTGTTTTGCAGCTTATATT- P_troglodytes300014 CGGGCT-ATACCA-----------ATAGTTCACTACTATTTTGTGGTCTACATT- P_troglodytes300082 TGGGTT-ATAACATTAATATATATATAATTCACTACTAGTTTGTAATCTACATT- P_troglodytes300634 TGGGCT-ATACCACTTAG-----TATAGTTCGCTACTATTTTGTGGCCTACATG- P_pygmaeus300052 TGGGTT-ATAACATTAATATACATATAATTCACTACTAGTTTGTAATCTACATT- P_pygmaeus300206 CGGGCT-ATACCA-----------ATAGTTCACTACTATTTTGTGGTCTACATT- P_pygmaeus300507 AGGGCT-ATACCCCTTGG-----TATAGTTCACCACTATTTTGCAGCTTATATT- P_pygmaeus300730 TGGGCT-ATATCACTTAG-----TATAGTTCGCTACTCTTTTGTGGCCTACATG- R_norvegicus300461 TGGACT-ATACCACTTAG-----TATTGTTCATTACTATACTGTTGCCTATATT- R_norvegicus300656 TGGACT-ATACCACTTAG-----TATGGCTCATTACTATATTGTGGCCTACATT- R_norvegicus300801 TGGACT-ATACCACTTAC-----TATGGTTCATTACTATATTGTGGCCTACATT- R_norvegicus301033 TGGACT-ATACCACTTAG-----TATGGTTCATTACTATATTGTGGCCTACATT- R_norvegicus301057 TGGACC-ATACCACTTAG-----TATGGTTCATTACTATATTGTGGCCTACATT- S_araneus300974 TGG-CT-ATATCACTCAGC---ATATAGCTTGCTACTAACTTGTGGCCTACATT- T_belangeri300360 TGGGCT-ATATCACTTAG-----TACAGTCCACTACTATTCTGTGGCCTACATG- T_belangeri300392 TGGGCT-ATATCACTTAG-----TACAGTCCACTACTATTATGTGGCCTACATG- T_truncatus300290 TGAGCT-ATACCACTTAG-----TATAGTTCATTACTATTTTGTGGCCTACATT-

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