Family: SNORA22

CLUSTAL W (1.83) multiple sequence alignment C_familiaris300274 --ACACTTAGAACAGTTAGATGGCTTT-AATGGTTC-CCTTGGCTT--TGACACTG---- C_familiaris300385 CTGCACAGTGAACACCCAAGTGTACTT-TATAGTTC-CCTTGGCTT--TGATTCTGT--- C_porcellus300866 TTGCACAGTGAACACCCAAGTGTGCTT-TGTAGTTC--CTTGGCTT--TGACTCTGT--- D_novemcinctus300519 TTGCACGGTGAACACCCAAGTGTACTT-TATAGTTC-CCTTGGCTT--TGACTCTGT--- E_telfairi300076 TCGCACAGTGAACACCCGAGTGTGCTT-CATAGTTC-CCTTGGCCT--TGACACTGT--- E_telfairi300224 TCGCACAGTGAATACCCAAGTGTGCTT-CATAGTTC-CCTTGGCTT--TGACATTGT--- E_telfairi300266 TCGCACAGTGAACACCCGAGTGTGCTT-CGTAGTTC-CCTTGGCCT--TGACACTGT--- E_telfairi300367 TTGCACAGTGAGCATCCAAGTGTGCTT-CGTAGTTC-CCTTGGCCT--TGACACTGT--- E_telfairi300587 TTGCCAAGTGAACACCCGAGTTTGCTT-TGCAGTCC-TCTTGGCTT--TGATGCTGT--- E_telfairi300804 TCGCACAGTGAACACCCGAGTGTGCTT-TGTAGTTC-CCTTGGCCT--TGACACTGT--- E_telfairi300831 TCGCACAGTGGACACCTGAGTGTGCTT-CGTAGTTC-CCTTGGCCT--TGACACTGT--- E_caballus300057 TTGCACAGTGAACACCCAAGTGTGCTT-TATAGTTC-TCTTGGTTT--TGAATCTGT--- E_caballus300380 TTGCACAGTGAACACCCAAGTGTGCTT-TATAGTTC-CCTTGGTTT--TGAATCTGT--- E_europaeus300565 CTGCACAGTGAACACACCTGAGGGCTT-TATAGTTC-TCTTGGCTT--TAATTCTGT--- E_europaeus300675 TTGCACAGTGAACACCCAAGTGTGCTT-TATAGTTC-CCTTGGCTT--TGACCCTGT--- F_catus300042 ----------------TAGGGGGCCCT-AATA-TTC-CCTTGGTTT--TGGCCCTCTGCT G_gallus300055 TTGCACAGTGAACACCCAAGTGTGCTT-CATAGTTC-CCTTGGTTT--TAATTCTGT--- G_gorilla300016 TTGCGCAGTGAACACCCAAGTGTGCTT-TATAGTTC-CTTTGGCTT--TGACTCTGT--- H_sapiens300127 TTGCACAGTGAACACCCAAGTGTGCTT-TATAGTTC-CCTTGGCTT--TGACCCTGT--- H_sapiens300421 TTGCACAGTGAACACCCAAGTGTGCTT-TATAGTTC-CCTTGGCTT--TGACCCTGT--- H_sapiens300623 TTGCACAGTGAACACCCAAGTGTGCTT-TATAGTTC-CCTTGGCTT--TGACCCTGT--- H_sapiens300687 TTGGGCAGTGAACACCCAAGTGTGCTT-TATAGTTC-CTTTGGCTT--TGACTTTGT--- L_africana300466 TTGCACAGTGAACACCCAAGTGTGCTT-TATAGTTC-CCTTGGCCT--TGACTCTGT--- M_mulatta300621 TTGCACAGTGAACACCCAAGTGTGCTT-TATAGTTC-CTTTGGCTT--TGACTCTGT--- M_mulatta300706 TTGCACAGGGAATACCCAAGTGTGCTT-TATAGTTT-CCTTGGCTT--TGACCCTGT--- M_murinus300264 TTGTACAATGAACACCCAAGAGAGCTT-TATAGTTC-CCTGGACTT--TGACACTGT--- M_murinus300566 CTGCACAATGAACACCCAAGACTGCTT-CCTCATTC-CCTTGGCTT--TGACACTGT--- M_domestica300099 CTGCACAGAGAACACCCAAGCTTACTT-TGTAGTTC-CCTTGGCTC--ATAGTCTGT--- M_musculus300777 TTGCACAGTGAACACCCAAGTGTGCTC-TGTAGTTC-CCTTGGCCT--TGACTCTGT--- M_lucifugus300404 TTGCACAGTGAACACCCAAGTGTTCTT-TATAGTTC-CCTTGGCTT--TGACTCTGT--- M_lucifugus300664 TTGCACAGTGAACACCCAAGTGTGCTT-TATAGTTC-CCTTGGCTT--TGACTCTGT--- M_lucifugus300854 TGTTATTGGGAAAAAAAAGAATAACTT-TATAGTTC-CCTTGGCTT--TGACTCTGT--- M_lucifugus300869 ---------------GTTTAAAATA------AAAAC----TAAAT-----ACTTTGT--- M_lucifugus300166 TTGCACAGTGAACACC--AGTGTGCTC-TCTGGTTC-CCTGGGCTT--TGACTCTGT--- O_anatinus304139 TCGCACAGCGAACACCCAAGTGTGCTC-TCTAGTTC-TCTTGGTCT--AAATTCTGT--- O_cuniculus300291 ---TTCAGTGAACACACAAGTGTGCCT-GCCAATTC-CCTTGGTTT--TAACTCTG---- O_cuniculus300328 TTGCACAGTGAACACCCAAGTGTGCTT-GATAGTTC-CCTTGGCTT--TAACTCTGT--- O_cuniculus300457 TTGCACAGTGAACACCCAAGTGTGCTT-GATAGTTC-CCTTGGCTT--TAACTCTGT--- O_garnettii300356 ---TATCTCAACAAAAAAGAAAAAA------AAAAC-CCTTGACTT--TGACCTTGT--- O_garnettii300619 TGGCACAGTGAACTCCCATG-GTGCTT-TACGCTTG-CCTTGGCTT--TGACTCTGT--- P_troglodytes300058 TTGCACAGTGAACACCCAAGTGTGCTT-TATAGTTC-CCTTGGCTT--TGACCCTGT--- P_troglodytes300389 TTGCACAGTGAACACCCAAGTGTGCTT-TATAGTTC-CCTTGGCTT--TGACCCTGT--- P_troglodytes300546 TTGCACAGTGAACACCCAAGTGTGCTT-TATAGTTC-CCTTGGCTT--TGACCCTGT--- P_troglodytes300650 TTGCACAGTGAACACCCAAGTGTGCTT-TATAGTTC-CTTTGGCTT--TGACTCTGT--- P_pygmaeus300246 TTGCACAGTGAACACCCAAGTGTGCTT-TATAGTTC-CCTTGGCTT--TGACCCTGT--- P_pygmaeus300554 TTGCACAGTGAACACCCAAGTGTGCTT-TATAGTTC-CCTTGGCTT--TGACCCTGT--- P_pygmaeus300645 TTGCACAGTGAACACCCAGGTGTGCTT-TATAGTTC-CTTTGGCTT--TGACTCTGT--- R_norvegicus300552 CTGCACAGTGAACACCCAAGTGTGCTC-TGTAGTTC-CCTTGGCCT--TGACTTTGT--- R_norvegicus301022 TTGCACAGTGAACACCCAAGTGTGCTC-TGTAGTTC-CCTTGGCCT--TGACTCTGT--- S_araneus300048 CTGCACAGTGAACACCCAAGTGTTCTT-TATAGTTC-CCTTGGTTT--TAACTCTGT--- S_araneus300139 CTGCTCAGTGAATACCCAAGTGTGCCT-TGGAGTCC-CCTTGGCTT--TAACTCTGT--- S_araneus300413 TTACATAGTGAACTCCCATG-GTCCTT-TAATGTCC-CCTTGGTTT--TTACTCTGT--- S_araneus300844 TTATGCAGTGAACACCAAAGTGTGCTT-TATAGTTC-CCTTGGTTT--TAACTGTGT--- S_araneus300931 TTACACAGTGAACACTGCAGTGTGCTT-TGTCGTTC-CCTTGGTCT--TAACACTGT--- S_araneus301021 TTGCACAGTGAACACTCAAATGTGCTT-TGTAGTTC-TCTTGG-TT--TAACTCTGT--- S_araneus301051 TTGCACAGTGAACACCCAAGTGTTCTT-TATAGTTC-CCTTGGTTT--TAACTCTGT--- T_nigroviridis300058 GTGCACAGCGAACACCCAAGGATGCTAACATGGCTCCCCCTGGTCTCCTGAATCTGT--- T_nigroviridis300059 TTGCACGGCGAACACCCAGGGATGCTC-TGTGGCTCTCCCTGGTCTCTCATGTCTGT--- T_belangeri300122 TTGCACAGTGAACACCCAAGTGTGCTT-GATAGTTC-CCTTGGCTT--CGACTCTGT--- T_truncatus300255 TTGCACAGTGAACACCAAGAGTGCCTT-----AGTT-CCTTGGTTT--CAGCTCTGT--- T_truncatus300309 TTGCACAGTGAACACCCAAATGTGCTT-TATAATTC-CCTTGGCTT--TGACTCTGT--- V_komodoensis300036 GTGCACAGTGAACACCCAAGTGAGCTC-TGCAGCTC-CCTTGGCAT---AACTCTGT--- X_tropicalis300091 TGGCATAGAGAACACCCAAGTGTGCTT-TGTAGCTC-CCTTGGCCT--TACATCTGT--- X_tropicalis300092 ATGCACAGAGAACACCCAAGTGTGCTT-TCTAGCTC-CCTTGGCCT--TAAAACTGT--- * C_familiaris300274 GGATAGAGCAATG---TG-TGTTTTTTACCTCTGCATTGAATAGACTG--TTTATCCTTT C_familiaris300385 -GCTAGAGCAATG---TC-TGTTCTTTTCCTCTGCATTGAAAGGACTA--TTTATCCTTT C_porcellus300866 -GCTAGAGTAATG---TCCTGTTCTTTCCCTCTGCATTGAAAGGACTATTTTTTTCCTTT D_novemcinctus300519 -GCGAGAGCAATA---TCTGTTCTTCT-CCTCTGCATTGAAAGGAATAT------CCTTT E_telfairi300076 -GCTAGAGCAATG----TCTGGTCTTTTCCTCTGCATTGAAAGGCACG--TTCATCCTTT E_telfairi300224 -GCTAGAGCAACG----ACTGGTCTTT--TCCTAAATAAATA-AA-----TGTAGGAGTG E_telfairi300266 -GCTAGAGCAATG----TCTGGTCTTTTCCTTTGCATTGAGAGGCACA--TTCATCCTTT E_telfairi300367 -GCTAGAGCAATG----TCTGGTCTTTTCGTCTGCACTGAAAGGCACG--TTCATCCTTT E_telfairi300587 -GCTAAAGCAAGG----CCTGTTCTTTTTCTCTGCATCGAAAGGCGCA--TTCATCCTTT E_telfairi300804 -GCTAGAGCAATG----TCTGGTCTTTTCCTCTGCATTGAGAGGCACG--TTCATCCTTT E_telfairi300831 -GCTAGAGCAATG----TCTGGTCTTTTCCTCTGCATTGAAAGGCACG--TTCATCCTTT E_caballus300057 -GCTAGAGCAATA---TC-TGTTCTTTTCCTCTGCATTGAAAGGACTA--TTTATCCTTT E_caballus300380 -GCTAGAGCAATG---TC-TGTTCTTTTCCTCTGCGTTGAAAGGACTA--TTTATCCTTT E_europaeus300565 -GCTAAAGCAACG---GCTGTTCTTTT-CCTCTGCATTAAAAGGACTCC-TTTATCCTTT E_europaeus300675 -GCTAGAGCAATG---TC-TGTTCTTTTCCTCTGCGTTGAAAGGGCTAC-TTTATCCCTT F_catus300042 AGATAGAGCAAGG---TC-TGTTCTTTTCCTCTGCACTGAAAGGACTA--TTCATCCTTT G_gallus300055 -GCTAGAATAA-----CCTGTGCTTTT-CCTCTGCATTGGAAGGATTGG-CAT-TCCTTT G_gorilla300016 -GCTAGAGCAATG----TCTGTTATTTTTCTCTGCATTGAAAGGAGCA--TTTATGCTTT H_sapiens300127 -GCTAGAGCATT----GCCTGCTCTTCTCCTCTGCATTGAAAGGAATA--TTTATCCCTT H_sapiens300421 -GCTAGAGCATT----GCCTGCTCTTCTCCTCTGCATTAAAAGGAATA--TTTATCCTTT H_sapiens300623 -GCTAGAGCATTCATTACCTGTTCATCTGCTCTGCATTGAAAGGAATA--TTTGTCCTTT H_sapiens300687 -GCTAGAGCAATG----TCTGTTATTTTTCTCTGCATTGAAAGGAGCA--TTTATCCTTT L_africana300466 -GCTAGAGCAACA---TCTGTTCTTTT-CCTCTGCATTGGAAGGAGTAT-TTA-TCCTTT M_mulatta300621 -GCTAGAGCAATG----TCTGTTATTTTCCTCTGCATTGAAAAGAACA--TTCATCCTTT M_mulatta300706 -GCTAGAGCATT----ACCTGTTCTTCTCCTCTGCATTGAAAGGAATA--TTTATCCTTT M_murinus300264 -GCTGGAGCAATG---AC-TGTTCTTTTCCTCTGCATTGAAAGGAGTA--TTTATCCTTT M_murinus300566 -GCTAGAGCAATG---TC-TGATCATTTTCTCTTCATTGAAAGGAATA--TTTATCCTTT M_domestica300099 -GCTAGAGTAATA---GCTGCTCTTTT-CCTCTGCATTGGAAGGAATAT-CTA-TCCTTT M_musculus300777 -GCTAGAGTAAAG---TC-TGTTCTTTTCCTCTGCATTAAAAGGAGTAC-TGTGTCCTTT M_lucifugus300404 -GCTAGAGCAATG---TC-TGTTCTTTTCCTCTGCATTGAAAGGACTG--TTTAACCTTT M_lucifugus300664 -GCTAGAGCAATG---TC-TGTTCTTTTCCTCTGCATTGAAAGGACTG--TTTATCCTTT M_lucifugus300854 -GCTAGAGCAATG---TC-TGTTCTTTTCCTCTGCATTGAAAGGACTG--TTTATCCTTT M_lucifugus300869 -GCTAGAGCAATG---TC-TGTTCTTTTCCTCTGCATTGAAAGGACTG--TTTATCCTTT M_lucifugus300166 -GCTACAGCAGTG---TC-TGTTCTTTTCCTCTGTAGTGAAGGGATTA--TGTATCCTTG O_anatinus304139 -GCTAAAGCAAAC---GTTGTTCTTTT-CCTCTGCAATGAAAGGAGTCC-TTT-TCCTTT O_cuniculus300291 --CTCCAGCAGGG---TC-TGTTCTTTTCCTCTGCATTGAAAGGAGTT--TTTATCCTTC O_cuniculus300328 -GCTACAGCAATG---TC-TGTTCTTTTCCTCTGCATTGAAAGGAGTT--TTTATCCTTT O_cuniculus300457 -GCTACAGCAATG---TC-TGTTCTTTTCCTCTGCATTGAAAGGAGTT--TTTATCCTTT O_garnettii300356 -GCTAAAGCAATG---GC-TATTCTTTTCCTCTGCATTGAAAGGAGTA--TTTATCCTTT O_garnettii300619 -GCTGGAGCAATG----TCTGATCTTTCCTCTTCATTAAAAAGAA-----TTTATCCTTC P_troglodytes300058 -GCTAGAGCATT----GCCTGCTCTTCTCCTCTGCATTGAAAGGAATA--TTTATCCTTT P_troglodytes300389 -GCTAGAGCATT----GCCTGCTCTTCTCCTCTGCATTGAAAGGAATA--TTTATCCTTT P_troglodytes300546 -GCTAGAGCATTCATTACCTGTTCATCTGCTCTGCATTGAAAGGAATA--TTTGTCCTTT P_troglodytes300650 -GCTAGAGCAATG----TCTGTTATTTTTCTCTGCATTGAAAGGAGCA--TTTATCCTTT P_pygmaeus300246 -GCTAGAGCATT----GCCTGCTCTTCTCCTCTGCATTGAAAGGAATA--TTTATCCTTT P_pygmaeus300554 -GCTAGAGCATT----ACCTGTTCTTCTCCTCTGCATTGAAAGGAATA--TTTGTCCTTT P_pygmaeus300645 -GCTAGAGCAATG----TCTGTTATTTTCCTCTGCATTGAAAGGAGCA--TTTATCCTTT R_norvegicus300552 -GCTA-----AAG---TC-TTTTCTTTTCCTCTGCATTGAAAG---TAC-TGTGTCCTTT R_norvegicus301022 -GCTAGAGTAAAG---TC-TGTTCTTTTCCTCTGCATTGAAAGGAGTAC-TGTGTCCTTT S_araneus300048 -GCTAGAGCAATA---TC-TGTTCTTTACCTCCGTATTGACAGGACTA--T----CCTTT S_araneus300139 -GCTAAGACAATG---AC-T-TTCTGTACCTCTGCATTTAAAGGA------TTATTCTTT S_araneus300413 -GCTAGAGCAATG---TC-TTTTCTTTACCCCTGCATTAAAAACA------CAATCATTT S_araneus300844 -GCTAGAGTGATG---TC-TGTTTTTTACTTCTGCATTGAAAAGG------CTGCCATTT S_araneus300931 -GCCAGAGCAATG---TC-TGTTCCACAGCTCTGCGTTGAAAGGA------TGGTCCTTT S_araneus301021 -GCTAGTACAATG------T-TTCTTTACCTTTTCATTGAAAGGA------CTATCCTTT S_araneus301051 -GCTAGAGCAATG---TC-TGTTCTTTTCCTCTGCACTGAAAGGACTA--T----CCTTT T_nigroviridis300058 -GCTAAAGTAA-A---TCTG-ATTTGTACCTCTGCATTTGGAGAGCTGC-TTT-CTCTTT T_nigroviridis300059 -GCCACAGCGA-C---TCTG-GTCATTTCCTCTGCATTCTGAGAGTCTC-CGT-CTCTCC T_belangeri300122 -GCTAGAGCAATG---TC-TGGTCTTTTCCTCTGCGTTGGAAGGACTA--TTTATCCTTT T_truncatus300255 -GCTAGAGCAATG---TC-TGTTCTTTTTCTCTACACTGAAA-GCTTA--TTTATCCTTT T_truncatus300309 -GCTAGAGCAATG---TC-TGTTCTTTTCGTCCGCATTGAAAGGA--------------- V_komodoensis300036 -GCTAGAATAA-----CCTGTGCTTTACCCTCTGCATTGGAAGGACCAT-CTT-TCCTTT X_tropicalis300091 -GCTAAATTAATA---TATGTACTTTTACCTCTGCGGTAGAAGG-TGGC-TTT-TCCTTC X_tropicalis300092 -GCTAAATAGATG---TCTGTCCTTTTTCCTCTGCGGTAGGAGA-T--T-TTA-TTCTCT C_familiaris300274 TGAA-TGCATTCAGAAAGTCAACACATTA- C_familiaris300385 TAAA-TGTATTCAAAAAGTCAGCACATTA- C_porcellus300866 TAAA-TGTATTCAGAAAGGCAGCACATAC- D_novemcinctus300519 TAAA-TGTATTCAGAAGTTCAGCACATTT- E_telfairi300076 CAAA-TGTATTCAAAAGGCCAGCACATCT- E_telfairi300224 -GAG-TCTAGCC------------------ E_telfairi300266 CAAA-TGTATTCAAAAGGCCAGCACATCT- E_telfairi300367 CAAA-TGTATTCAAAAGGCCAGCACACCT- E_telfairi300587 TGAA-TGCATTTAAAAGGCCAGTGCCTTA- E_telfairi300804 CAAA-TGTATTCAAAAGGCCAGCACATCT- E_telfairi300831 CAAA-TGTATTCAAAAGGCCAGCACATCT- E_caballus300057 TAAG-TGTATTCAGAAAGTCAGCACGTTA- E_caballus300380 TAAA-TGTATTCAGAAAGTCAGCACATAT- E_europaeus300565 TATA-TGTATTCAAAAGGTCAGCACAAAT- E_europaeus300675 TAAA-TGTATTCAGAAAAGCAGCACATTA- F_catus300042 TAAG-CGTATTCAGAAAGTCAGCACGTTT- G_gallus300055 TATA-TGTATTCAGAAGGACAGTACATTT- G_gorilla300016 TAAA-TGTATTCAGAAAGCCAGTACATTT- H_sapiens300127 TAAA-TGTATTCAGAAAGCCAGCACATTA- H_sapiens300421 TAAA-TGTATTCAGAAAGCCAGCACATTA- H_sapiens300623 TAAA-TGTATTCAGAAAGCCAGCACATTA- H_sapiens300687 TAAA-TGTATTCAGAAAGCCAGTACATTT- L_africana300466 TAAA-TGTATTCAAAAGGTCAGCACATTT- M_mulatta300621 CAGA-TGTATTCAGAAAGCCAGCACATTT- M_mulatta300706 TAAA-TGTATTCTGAAAGCCAGCACATTA- M_murinus300264 TAGA-TGTATTCAGAAAGCCAGCAAGCAC- M_murinus300566 TAAA-TGTATTCAGAAAGCCAGCACATTA- M_domestica300099 TATA-TGTATTCAGAAGGGCTGCACATTT- M_musculus300777 TCAA-TGTATTCAGAAAGTCAGCACACCA- M_lucifugus300404 TAAA-TGTATTCATAAAGTTAGCACATTA- M_lucifugus300664 TAAA-TGTATTCATAAAGTCAGCACATTA- M_lucifugus300854 TAAA-TGTATTCATAAAGTCAGCACATTA- M_lucifugus300869 TAAA-TGTATTCATAAAGTCAGCACATTA- M_lucifugus300166 TAAA-TGTATTCAGGAAGTCCGCACACTA- O_anatinus304139 TATA-TGTATTCAGAAGGACAGCACACGG- O_cuniculus300291 TAAA-TATATTCAGGAAGTCTGCATATGA- O_cuniculus300328 CAAA-TGTATTCAGAAAGTCAGCACATTA- O_cuniculus300457 CAAA-TGTATTCAGAAAGTCAGCACATTA- O_garnettii300356 TAAA-TTTATTCAGAAAGCCAGCACATTG- O_garnettii300619 TAAA-TGTATTCAAAGAGCTGGAACCTTT- P_troglodytes300058 TAAA-TGTATTCAGAAAGCCAGCACATTA- P_troglodytes300389 TAAA-TGTATTCAGAAAGCCAGCACATTA- P_troglodytes300546 TAAA-TGTATTCAGAAAGCCAGCACATTA- P_troglodytes300650 TAAA-TGTATTCAGAAAGCCAGTACATTT- P_pygmaeus300246 TAAA-TGTATTCAGAAAGCCAGCACATTA- P_pygmaeus300554 TAAA-TGTATTCAGAAAGCCAGCACATTA- P_pygmaeus300645 GAAA-TGTATTCAGAAAGCCACTACATTT- R_norvegicus300552 TAAA-TGTATTCAGAAAATCAGCACACCA- R_norvegicus301022 TAAA-TGTATTCAGAAAATCAGCACACCA- S_araneus300048 TAAG-TGTATTCAGAAAGTCAGCACATTA- S_araneus300139 TTAG-TGTATTCAGAAAGTCAGCACACTA- S_araneus300413 TTAA-TGTATTCATAAAGTAAACACATCA- S_araneus300844 TAAT-TGTATTAAGAAAGTAAAAA-GTCAG S_araneus300931 CAAAGTGTATTCGAGAAGTCAGTTCTTTG- S_araneus301021 TAAG-TATATTAACAGAGTCAGCACGTTA- S_araneus301051 TAAG-TGTATTCAGAAAGTCAGCACATTA- T_nigroviridis300058 TAAA-TGTATTCAGCAGATCAGAATAAAT- T_nigroviridis300059 TGCA-TGTATTCAGATGACCAGAACAAAC- T_belangeri300122 TAAA-TGTATTCAGAAAACCAGCACATAA- T_truncatus300255 GTAA-AGTATTCAGAAAGTCAGCACATCA- T_truncatus300309 ------GTATTCAGAAAGTCAGCCCATTA- V_komodoensis300036 TACA-TGTATTCAAAAGGACAGGACAATT- X_tropicalis300091 TATA-TGTATTCAGAAGTACAGTACAGTG- X_tropicalis300092 TGCA-CGTATTCAGAAGCACAGTACATTT- *